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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF01900 - RNase_P_Rpp14)
FAM  PF01900
PID  RNase_P_Rpp14
DES  Rpp14 family
IPR  IPR002759
ANO  13
ALN  152
AID  0.251947
APH  (((POP5_YEAST/7-132:0.77404,(((Q9Y2Q6_HUMAN/7-116:0.61056,Q9VVE0_DROME/7-113:0.82977):0.22979,Q9XWY3_CAEEL/7-110:1.31661):0.32825,LIPB_ARATH/7-129:0.83147):0.26893):0.12412,RNP2_SCHPO/7-122:0.32878):0.30608,(((RNP2_PYRHO/17-116:0.29505,(RNP2_METTH/13-118:0.64060,RNP2_ARCFU/13-109:0.68074):0.28726):0.08707,RNP2_METJA/17-114:0.57593):0.15068,(RNP2_SULSO/44-142:0.78555,RNP2_AERPE/14-115:0.87395):0.34341):0.03444,RP14_HUMAN/23-123:1.68067);
ATP  (((POP5_YEAST/7-132,(((Q9Y2Q6_HUMAN/7-116,Q9VVE0_DROME/7-113),Q9XWY3_CAEEL/7-110),LIPB_ARATH/7-129)),RNP2_SCHPO/7-122),(((RNP2_PYRHO/17-116,(RNP2_METTH/13-118,RNP2_ARCFU/13-109)),RNP2_METJA/17-114),(RNP2_SULSO/44-142,RNP2_AERPE/14-115)),RP14_HUMAN/23-123);
ATL  12.3837
DNO  11
DLN  456
DID  0.38883
DPH  (((((RNP2_SULSO/44-142:0.71000,(((RNP2_METTH/13-118:0.72929,RNP2_PYRHO/17-116:0.16670):0.23360,RNP2_METJA/17-114:0.27083):0.09928,(RNP2_SCHPO/7-122:0.28412,RP14_HUMAN/23-123:0.93495):0.12343):0.08433):0.17973,POP5_YEAST/7-132:0.53983):0.15549,LIPB_ARATH/7-129:0.57714):0.15406,Q9XWY3_CAEEL/7-110:0.69921):0.19787,Q9VVE0_DROME/7-113:0.51556,Q9Y2Q6_HUMAN/7-116:0.49886);
DTP  (((((RNP2_SULSO/44-142,(((RNP2_METTH/13-118,RNP2_PYRHO/17-116),RNP2_METJA/17-114),(RNP2_SCHPO/7-122,RP14_HUMAN/23-123))),POP5_YEAST/7-132),LIPB_ARATH/7-129),Q9XWY3_CAEEL/7-110),Q9VVE0_DROME/7-113,Q9Y2Q6_HUMAN/7-116);
DTL  815.467
RID  0.248639
RPH  ((((RNP2_SULSO/44-142:1.03865,((RNP2_SCHPO/7-122:0.31864,(((RNP2_METTH/13-118:0.96245,RNP2_PYRHO/17-116:0.20675):0.21328,RNP2_METJA/17-114:0.49676):0.28758,POP5_YEAST/7-132:0.75479):0.22211):0.09990,LIPB_ARATH/7-129:1.03753):0.18187):0.11992,RP14_HUMAN/23-123:1.69875):0.21005,Q9XWY3_CAEEL/7-110:1.23143):0.27678,Q9VVE0_DROME/7-113:0.86878,Q9Y2Q6_HUMAN/7-116:0.58231);
RTP  ((((RNP2_SULSO/44-142,((RNP2_SCHPO/7-122,(((RNP2_METTH/13-118,RNP2_PYRHO/17-116),RNP2_METJA/17-114),POP5_YEAST/7-132)),LIPB_ARATH/7-129)),RP14_HUMAN/23-123),Q9XWY3_CAEEL/7-110),Q9VVE0_DROME/7-113,Q9Y2Q6_HUMAN/7-116);
RTL  11.0224
LNK  LIPB_ARATH/7-129:O23021:AC002376
LNK  POP5_YEAST/7-132:P28005:X62577
LNK  Q9VVE0_DROME/7-113:Q9VVE0:AE003525
LNK  Q9XWY3_CAEEL/7-110:Q9XWY3:AL032622
LNK  Q9Y2Q6_HUMAN/7-116:Q9Y2Q6:AF070660
LNK  RNP2_AERPE/14-115:Q9YCV1:
LNK  RNP2_ARCFU/13-109:O29761:
LNK  RNP2_METJA/17-114:Q57917:U67499
LNK  RNP2_METTH/13-118:O26783:AE000848
LNK  RNP2_PYRHO/17-116:O59150:AP000006
LNK  RNP2_SCHPO/7-122:Q9UU90:AL109850
LNK  RNP2_SULSO/44-142:Q9UXC7:Y18930
LNK  RP14_HUMAN/23-123:O95059:AF001175
AMK  xxxxxxxxxxxxxxxxxxxxx..........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.x.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........x.xxxxxxxxxxxxx.xxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................xxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  RP14_HUMAN/23-123
ASQ  VCLEFQD--------------..........-CGVGLNAAQFKQLLISAVKDLFGEVDAALP---LDILT-.-.-YEEKTLSAILRICSSGLVKLWSSLTLLGSYKGKK----CA........-.FRVIQVSPFLLALsGNSRELVLD----
DSQ  GTCTGCCTAGAATTTCAAGAT------------------------------------------..............................---TGTGGAGTTGGACTGAATGCTGCACAGTTCAAACAGCTGCTTATTTCGGCTGTGAAGGACCTGTTTGGGGAGGTTGATGCCGCCTTACCT---------TTGGACATCCTAACC---...---...---TATGAAGAGAAGACCTTGTCAGCCATCTTGAGAATATGTAGCAGTGGTCTTGTCAAATTGTGGAGCTCTTTGACCCTGTTAGGATCCTATAAAGGCAAAAAA------------TGTGCT........................---...TTCCGGGTGATTCAGGTTTCTCCATTTCTTCTTGCATTAtctGGTAATAGTAGGGAACTAGTATTGGAT------------
TRN  10010101100011000
NAM  RNP2_SULSO/44-142
ASQ  RYIVFYVIS------------..........--EYKVKGDDLERVIRNSLKDLLGSVWLNIANPKV-VTY-.-.--REDTQEGIISTNRVGYKAVLASLPFAKEINNNK----IL........-.IVPRRTT------.GSLKKAKK-LIGL
DSQ  AGGTATATAGTATTTTATGTAATCTCT------------------------------------..............................------GAATATAAAGTAAAAGGCGATGATTTAGAGAGAGTTATTCGCAACTCCTTGAAGGACTTATTAGGTAGTGTGTGGCTTAACATTGCAAACCCCAAAGTT---GTTACCTAT---...---...------CGAGAAGATACTCAAGAAGGAATTATATCCACTAATAGGGTAGGTTACAAGGCAGTTTTAGCTAGTTTACCCTTTGCTAAGGAAATTAATAATAATAAA------------ATTCTA........................---...ATAGTTCCTAGAAGGACAACC------------------...GGTAGCTTAAAAAAGGCGAAAAAA---CTAATCGGATTA
TRN  10010101110011010
NAM  POP5_YEAST/7-132
ASQ  RYILFEIIFPPTDTNVEESVSkadillshhrASPADVSIKSILQEIRRSLSLNLGDYGSAKCNSLLQLKY-.-.-FSNKTSTGIIRCHREDCDLVIMALMLMSKIGDVD---GLI........-.VNPVKVS------.GTIKKIEQ-FAMR
DSQ  AGATATATCCTTTTTGAAATTATATTCCCACCTACAGACACCAACGTTGAGGAATCTGTGTCGaaagcagacatcttgctttcgcatcacagaGCATCGCCTGCGGATGTGTCCATAAAGTCGATACTCCAAGAGATACGACGCTCGCTGTCGTTGAATCTGGGCGACTATGGGTCTGCAAAATGTAACTCTCTCTTGCAGTTGAAATAC---...---...---TTTTCAAATAAGACGTCTACGGGGATAATCCGATGCCATCGAGAGGATTGCGACCTTGTTATCATGGCATTGATGTTGATGTCGAAAATTGGCGACGTCGAT---------GGACTGATC........................---...GTGAACCCCGTCAAGGTAAGT------------------...GGGACCATCAAGAAAATAGAGCAG---TTTGCTATGAGA
TRN  10010101100011001
NAM  RNP2_SCHPO/7-122
ASQ  RYLLFEVLYPEAKEFFDYPTI..........PSDSSITTSSLSKIIRTMVAENFGDVGIGKVASSLTVKY-.-.-FSPNTSTGILRVSRQHFRLAWAALVLIRELYGKP----VI........-.IRVVRVS------.GTIKKAELAAIER
DSQ  CGATATTTACTTTTTGAAGTATTATATCCTGAAGCAAAAGAGTTTTTTGACTATCCTACTATC..............................CCTTCTGATAGTTCTATAACTACGTCTAGTCTTTCTAAAATAATTAGAACCATGGTTGCAGAAAATTTCGGTGATGTTGGTATTGGAAAGGTTGCATCTAGTCTAACTGTAAAATAT---...---...---TTTTCACCTAATACATCTACTGGCATTCTGCGGGTCTCAAGACAGCATTTTCGTTTGGCATGGGCCGCATTAGTTTTAATAAGGGAATTATATGGCAAGCCT------------GTAATA........................---...ATTCGCGTGGTTCGTGTATCT------------------...GGTACAATAAAAAAGGCAGAATTAGCTGCCATTGAACGA
TRN  10010101100011000
NAM  RNP2_METJA/17-114
ASQ  RYIAFKILY------------..........--DEELKEGEVVNLIRKAVLEYYGSWGTSKANPWL-VYY-.-.--D--FPYGILRCQRDNVDYVKASLILIREFKEKP----VN........-.IICLGVS------.GTIRKAKIKFLGI
DSQ  AGATATATTGCATTTAAAATATTATAC------------------------------------..............................------GATGAGGAGTTAAAAGAGGGAGAGGTTGTTAATTTAATTAGAAAAGCTGTTTTAGAATATTATGGCTCTTGGGGAACATCCAAGGCAAATCCATGGCTT---GTTTATTAT---...---...------GAT------TTTCCTTATGGTATTTTGAGATGTCAAAGGGATAATGTTGATTATGTAAAAGCCTCTTTAATTTTGATTAGGGAATTTAAAGAAAAGCCA------------GTAAAT........................---...ATTATCTGCTTAGGAGTTTCC------------------...GGGACAATAAGAAAGGCAAAAATAAAATTTTTAGGAATA
TRN  10010101110011010
NAM  RNP2_PYRHO/17-116
ASQ  RYIAFEIIS------------..........--DGDFTKDEVKELIWKSSLEVLGETGTAIVKPWL-IKF-.-.--DPNTKTGIVRCDREYVEYLRFALMLVSEFNGKR----LI........-.IRTLGVS------.GTIKRLKRKFLAK
DSQ  AGATACATTGCATTTGAAATAATTAGT------------------------------------..............................------GATGGTGATTTTACAAAAGATGAAGTTAAAGAGCTCATATGGAAAAGCTCTTTAGAGGTACTTGGTGAAACAGGTACTGCTATCGTTAAACCTTGGCTT---ATAAAATTT---...---...------GATCCTAACACGAAGACTGGTATAGTTAGATGTGATCGAGAGTACGTTGAGTACCTTAGATTTGCGTTGATGCTAGTTTCCGAGTTCAATGGTAAAAGA------------CTAATT........................---...ATAAGGACGCTTGGAGTCTCT------------------...GGGACAATAAAAAGACTAAAAAGAAAATTCTTAGCAAAG
TRN  10010101110011010
NAM  RNP2_METTH/13-118
ASQ  RYIAFEVIS------------..........--ERELSREELVSLIWDSCLKLHGECETSNFRLWL-MKLWrFdFPDAVRVRGILQCQRGYERRVMMALTCAHHHSGVR----VA........-.IHILGLS------.GTIRSATQKFIKP
DSQ  AGGTACATAGCCTTTGAGGTGATCAGT------------------------------------..............................------GAGAGGGAGCTCTCAAGGGAGGAACTTGTCTCCCTCATATGGGATAGCTGCCTCAAGCTGCATGGGGAGTGTGAAACATCAAATTTCCGTTTATGGCTC---ATGAAGCTCTGGaggTTCgatTTTCCAGACGCCGTCAGGGTGAGGGGCATACTCCAGTGCCAGAGGGGCTATGAGAGGAGGGTCATGATGGCCCTCACATGCGCCCACCACCACAGCGGGGTGAGG------------GTCGCC........................---...ATCCACATCCTCGGCCTTTCA------------------...GGGACGATACGCTCGGCAACACAAAAGTTTATTAAACCT
TRN  10010101100011000
NAM  RNP2_ARCFU/13-109
ASQ  RYIAFRIIA------------..........--EKKIDERSLSRALSEKMLSLFGECF---AASGLRLEA-.-.-FDG--ERGIVRCYREALDKVMVALTLMTHVGGVR----VI........-.PLTLGVS------.GTIKRCKRKYLEV
NAM  RNP2_AERPE/14-115
ASQ  RYVAFEVLS--LD--------..........--GPPPGKGEFEEALRGVYLKAFGAESLALARPRI-VYY-.-.--EEESGRGVVAVVRDYRYHILAALGLVRMAGGRR----VL........-.VVPLRTS------.GTVKGALRAFRSP
NAM  Q9Y2Q6_HUMAN/7-116
ASQ  RYLLCELVSDDPR--------..........-CRLSLDDRVLSSLVRDTIARVHGTFG-APCSIGFAVRY-.-.-LNAYTGIVLLRCRKEFYQLVWSALPFITYLENKGHRYPCF........-.FNTLHVG------.GTIRTCQKFLIQY
DSQ  AGGTACCTGCTCTGCGAACTGGTGTCTGACGACCCCCGC------------------------..............................---TGCCGCCTAAGCCTCGATGACCGAGTTCTGAGCAGCCTCGTACGGGACACGATCGCCAGGGTGCACGGAACTTTCGGC---GCACCCTGCTCCATCGGCTTCGCGGTTCGATAT---...---...---CTCAATGCCTATACTGGAATAGTGCTACTTCGATGCAGAAAAGAATTCTATCAGCTTGTGTGGTCAGCTCTTCCCTTCATCACATACTTGGAGAACAAAGGACACCGTTACCCATGCTTT........................---...TTCAACACATTACATGTGGGA------------------...GGTACAATAAGAACATGTCAGAAGTTCCTAATTCAGTAC
TRN  10010101100011000
NAM  Q9VVE0_DROME/7-113
ASQ  RYIAVQIVPYTPT--------..........-QSLRLNDHSLTKILLQNVEKYYGVYGLAVIEQGFRVKY-.-.-INDRTKMAIIRCLHRGQRFVSSVLPLITLIGDVR----AK........-.FRTLYIG------.ATIIQCNKFIVKH
DSQ  AGGTATATAGCGGTGCAGATTGTGCCCTACACGCCAACA------------------------..............................---CAATCTCTGCGACTCAACGACCACAGCCTGACCAAGATCCTGCTTCAGAATGTGGAGAAGTATTACGGAGTCTATGGCCTCGCCGTGATCGAGCAGGGATTTCGAGTGAAATAC---...---...---ATCAACGATCGCACGAAAATGGCAATCATACGCTGTCTCCATCGAGGCCAACGCTTCGTGTCCAGCGTATTGCCATTGATTACTTTGATCGGAGATGTACGG------------GCCAAG........................---...TTTAGGACGCTGTACATTGGT------------------...GCCACCATCATCCAATGCAACAAGTTCATAGTCAAGCAC
TRN  10010101100011011
NAM  LIPB_ARATH/7-129
ASQ  RYMLMEVFLDPDKDLLGEGT-..........--PIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQVKY-.-.-VNPITKLCIVRSSREEHRQVWLAITLVKSIGNCP----EMrsprtlevWkLGTVNYL------.KSLKLQEKLVSER
DSQ  AGATACATGTTAATGGAAGTTTTTCTGGATCCGGACAAGGATCTTCTCGGAGAAGGAACA---..............................------CCGATCATTCTTACACAATTCAATCTCTCGAAAGCAATCAAAGACAGTATCCTCGTCAATTTCGGCGAGTGTGGTCTAGGTTCGTCTCTCGGTTCCTTCCAAGTGAAATAT---...---...---GTGAATCCAATCACGAAGCTATGCATTGTAAGATCATCAAGAGAAGAACACAGACAAGTTTGGTTAGCAATCACATTGGTCAAAAGCATCGGAAACTGTCCG------------GAAATGagatcccctagaaccttggaggttTGGaagCTAGGCACTGTCAACTATTTG------------------...AAATCCCTTAAACTGCAGGAGAAATTAGTTTCAGAGAGA
TRN  10010101100011000
NAM  Q9XWY3_CAEEL/7-110
ASQ  RYYVIRMLTNDGS--------..........--PPTPRKSSIFQELMKLTSEMFGDFGYSILKMSLSVRV-.-.-LDE--DVIVLRVAEGGNKYFGAILPCVHKIDKQP----MV........-.LQTIFIG------.RSMRSCEKRLIKS
DSQ  CGCTACTACGTGATTCGAATGCTCACAAATGATGGCTCA------------------------..............................------CCACCGACACCAAGAAAATCGTCGATTTTTCAAGAACTCATGAAACTCACGTCGGAAATGTTTGGAGATTTTGGATATTCTATTTTGAAAATGAGCCTTTCGGTTCGAGTT---...---...---CTCGACGAA------GACGTGATCGTACTCCGAGTGGCCGAAGGCGGAAATAAATATTTTGGAGCAATTCTTCCATGTGTTCATAAAATTGATAAGCAGCCA------------ATGGTC........................---...TTGCAGACTATTTTCATTGGC------------------...AGAAGCATGAGATCTTGCGAGAAACGACTCATCAAAAGC
TRN  10010101110011001
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