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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF01664 - Reo_sigma1)
FAM  PF01664
PID  Reo_sigma1
DES  Reovirus viral attachment protein sigma 1
IPR  IPR002592
ANO  3
ALN  474
AID  0.367534
APH  (VSI1_REOVL/2-469:0.40534,VSI1_REOVJ/1-462:0.37698,VSI1_REOVD/2-454:1.50241);
ATP  (VSI1_REOVL/2-469,VSI1_REOVJ/1-462,VSI1_REOVD/2-454);
ATL  2.28473
DNO  3
DLN  1422
DID  0.461574
DPH  (VSI1_REOVL/2-469:0.34719,VSI1_REOVJ/1-462:0.30334,VSI1_REOVD/2-454:0.88290);
DTP  (VSI1_REOVL/2-469,VSI1_REOVJ/1-462,VSI1_REOVD/2-454);
DTL  1.53343
RID  0.367534
RPH  (VSI1_REOVL/2-469:0.40534,VSI1_REOVJ/1-462:0.37698,VSI1_REOVD/2-454:1.50241);
RTP  (VSI1_REOVL/2-469,VSI1_REOVJ/1-462,VSI1_REOVD/2-454);
RTL  2.28473
LNK  VSI1_REOVD/2-454:P03528:M32862
LNK  VSI1_REOVJ/1-462:P04507:M32861
LNK  VSI1_REOVL/2-469:P04506:M32860
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  VSI1_REOVL/2-469
ASQ  DASLITEIRKIVLQLSVSSNGSQSK----EIEEIKKQVQVNVDDIRAANIKLDGLGRQIADISNSISTIESRLGEMDNRLVGISSQVTQLSNSVSQNTQSISSLGDRINAVEPRVDSLDTVTSNLTGRTSTLEADVGSLRTELAALTTRVTTEVTRLDGLINSGQNSIGELSTRLSNVETSMVTTAGRGLQKNGNTLNVIVGNGMWFNSSNQLQLDLSGQSKGVGFVGTGMVVKIDTNYFAYNSNGEITLVSQINELPSRVSTLESAKIDSVLPPLTVREASGVRTLSFGYDTSDFTIINSVLSLRSRLTLPTYRYPLELDTANNRVQVADRFGMRTGTWTGQLQYQHPQLSWRANVTLNLMKVDDWLVLSFSQMTTNSIMADGKFVINFVSGLSSGWQTGDTEPSST--IDPLSTTFAAVQFLNNGQRIDAFRIMGVSEWTDGELEIKNYGGTYTGHTQVYWAPWTIMYPCNV
DSQ  GATGCATCTCTCATTACAGAGATACGGAAAATAGTACTCCAACTATCTGTATCAAGCAATGGCTCCCAGTCAAAA------------GAAATCGAGGAAATCAAGAAACAAGTCCAGGTCAACGTTGATGATATCAGGGCTGCCAATATTAAACTCGACGGACTTGGAAGACAGATTGCTGACATCAGCAATAGCATCTCAACCATTGAGTCAAGATTGGGTGAGATGGATAATCGACTTGTGGGTATCTCGAGTCAGGTCACGCAATTATCTAACTCAGTTAGCCAGAACACTCAGAGCATATCCTCATTGGGTGACAGAATCAATGCTGTCGAACCACGAGTTGACAGTCTGGATACGGTCACGTCTAATCTCACTGGACGAACATCCACTTTGGAGGCAGATGTTGGAAGCTTACGGACAGAACTAGCAGCGCTAACAACACGGGTGACAACTGAGGTTACAAGGTTAGATGGTCTAATCAATAGTGGCCAGAATTCGATTGGTGAGCTATCCACAAGACTATCCAATGTGGAGACGTCTATGGTGACGACGGCTGGACGGGGACTGCAGAAAAACGGAAACACCTTGAACGTCATTGTAGGTAATGGAATGTGGTTTAATAGTTCTAATCAATTGCAGCTCGACCTTTCGGGGCAATCAAAAGGGGTGGGATTTGTCGGCACAGGAATGGTGGTTAAGATTGATACTAATTATTTTGCTTACAATAGTAATGGAGAGATTACATTGGTGAGTCAAATCAATGAATTGCCATCGCGCGTATCAACACTGGAATCAGCGAAAATCGATTCAGTTTTACCTCCATTAACCGTACGCGAAGCGAGCGGCGTACGTACCCTGAGCTTTGGTTATGATACGAGCGATTTTACAATCATCAACTCCGTACTGTCGTTACGGTCACGTTTGACTCTTCCGACATACAGGTACCCTCTGGAGCTCGACACAGCAAATAATAGAGTGCAGGTGGCAGATCGTTTTGGCATGCGCACGGGTACTTGGACGGGACAATTGCAATATCAGCACCCACAATTGAGTTGGAGAGCAAATGTCACTTTGAATTTGATGAAGGTGGATGATTGGTTGGTGTTGAGCTTTTCTCAGATGACGACTAACTCAATAATGGCAGATGGGAAATTTGTGATTAATTTTGTGTCTGGGTTATCTTCTGGATGGCAGACGGGGGATACTGAACCATCGTCAACT------ATTGATCCATTGTCTACGACATTTGCCGCGGTCCAATTTCTAAATAACGGTCAACGCATTGATGCGTTTAGGATCATGGGAGTATCGGAATGGACGGATGGAGAATTAGAGATTAAGAATTATGGTGGCACATACACCGGTCATACTCAAGTATATTGGGCTCCGTGGACGATCATGTATCCATGCAATGTG
TRN  10010101100011000
NAM  VSI1_REOVJ/1-462
ASQ  MSDLVQLIRREILLLTGNGESANSKH---EIEEIKKQIKDISADVNRISNIVDSIQGQLGGLSVRVSAIESGVSENGNRIDRLERDVSGISASVSGIDSRLSELGDRVNVAEQRIGQLDTVTDNLLERASRLETEVSAITNDLGSLNTRLTTELNDVR-------QTIAAIDTRLTTLETDAVTSVGQGLQKTGNSIKVIVGTGMWFDRNNVLQLFLSNQQKGLGFIDNGMVVKIDTQYFSFDSNGNITLNNNISGLPARTGSLEASRIDVVAPPLVIQSTGSTRLLRLMYEAVDFVVTNNVLTLRNRSVTPTFKFPLELNSADNSVSIHRNYRIRLGQWSGQLEYHTPSLRWNAPVTVNLMRVDDWLILSFTRFSTSGILASGKFVLNFVTGLSPGWATGSTEPSTT--TNPLSTTFAAIQFINGSSRVDAFRILGVAEWNAGELEITNHGGTYTAHTNVDWAPMTIMYPCLG
DSQ  ATGTCGGATCTAGTGCAGCTCATAAGAAGGGAGATCTTACTGTTAACTGGGAATGGAGAATCAGCCAACTCGAAACAC---------GAGATCGAGGAAATTAAGAAACAAATTAAAGACATCTCTGCTGATGTCAACAGGATCAGTAACATCGTTGATTCAATCCAAGGACAACTGGGTGGATTATCTGTACGCGTGTCAGCCATTGAATCGGGAGTTAGTGAGAACGGCAATCGAATTGATAGACTCGAGCGAGATGTCTCCGGCATATCGGCTAGCGTTAGCGGAATCGATTCGCGTTTATCCGAGCTGGGTGACCGAGTCAATGTTGCAGAACAGCGAATTGGCCAGTTGGATACAGTCACGGATAATCTCCTTGAGCGAGCATCAAGACTGGAAACTGAAGTATCAGCCATTACTAATGACCTTGGATCATTGAATACGAGGCTGACGACTGAATTGAACGATGTCCGC---------------------CAAACTATTGCTGCGATAGACACGCGTCTCACGACACTGGAGACCGATGCCGTGACGTCGGTTGGTCAAGGGCTTCAGAAGACTGGGAACTCGATTAAGGTTATTGTGGGTACGGGGATGTGGTTCGACCGCAATAATGTTCTGCAGTTATTCTTATCGAACCAGCAGAAAGGGTTGGGATTCATAGACAATGGAATGGTAGTGAAAATAGATACCCAGTATTTCAGCTTCGATAGCAATGGCAACATAACTCTGAACAACAACATAAGTGGTCTGCCGGCGCGAACAGGTTCCCTCGAGGCATCTCGTATCGATGTGGTAGCGCCACCGCTTGTGATACAGTCTACTGGTAGCACTCGGCTACTGCGTCTCATGTACGAGGCTGTGGACTTCGTGGTTACTAACAACGTTCTCACACTGAGAAATCGATCGGTCACGCCAACATTCAAGTTTCCTCTGGAGTTGAATAGTGCTGATAACTCAGTGAGCATTCATAGAAATTACCGCATTAGACTTGGGCAATGGTCAGGTCAATTGGAATATCACACGCCGAGTTTGCGTTGGAATGCTCCCGTCACGGTTAATTTGATGCGAGTAGACGATTGGCTCATTTTGAGTTTTACTCGGTTTTCGACGAGCGGCATCTTAGCGTCAGGAAAGTTTGTATTGAACTTCGTAACTGGTTTGTCTCCAGGGTGGGCGACTGGGAGTACCGAGCCCTCGACAACT------ACTAACCCACTGTCAACGACGTTTGCTGCAATTCAGTTCATCAATGGGTCATCTCGCGTAGACGCCTTTAGAATCTTGGGAGTCGCAGAGTGGAATGCCGGGGAACTAGAGATCACGAATCATGGCGGAACATATACAGCGCATACCAATGTCGACTGGGCGCCGATGACCATTATGTACCCATGTCTGGGC
TRN  10010101100011000
NAM  VSI1_REOVD/2-454
ASQ  DPRLREEVVRLIIALTSDNGASLSKGLESRVSALEKTSQIHSDTILRITQGLDDANKRIIALEQSRDDLVASVSDAQLAISRLESSIGALQTVVNGLDSSVTQLGARVGQLETGLADVRVDHDNLVARVDTAERNIGSLTTELSTLTLRVTSIQADFE--------------SRISTLERTAVTSAGAPLSIRNNRMTMGLNDGLTLSGNN-LAIRLPG-NTGLNIQNGGLQFRFNTDQFQIVNNNLTLKTTVFDSINSRIGATEQSYVASAVTPLRLNSS--TKVLDMLIDSSTLEIN-SSGQLTVRSTSPNLRYPIADVSGG--IGMSPNYRFRQSMWIGIVSYSGSGLNWRVQVNSDIFIVDDYIHICLPAFDGFSIADGGDLSLNFVTGLLPPLLTGDTEPAFHNDVVTYGAQTVAIGLSSGGAPQYMSKNLWVEQWQDGVLRLRVEGGGSITHSNSKWPAMTVSYPRSF
DSQ  GATCCTCGCCTACGTGAAGAAGTAGTACGGCTGATAATCGCATTAACGAGTGATAATGGAGCATCACTGTCAAAAGGGCTTGAATCAAGGGTCTCGGCGCTCGAGAAGACGTCTCAAATACACTCTGATACTATCCTCCGGATCACCCAGGGACTCGATGATGCAAACAAACGAATCATCGCTCTTGAGCAAAGTCGGGATGACTTGGTTGCATCAGTCAGTGATGCTCAACTTGCAATCTCCAGATTGGAAAGCTCTATCGGAGCCCTCCAAACAGTTGTCAATGGACTTGATTCGAGTGTTACCCAGTTGGGTGCTCGAGTGGGACAACTTGAGACAGGACTTGCAGACGTACGCGTTGATCACGACAATCTCGTTGCGAGAGTGGATACTGCAGAACGTAACATTGGATCATTGACCACTGAGCTATCAACTCTGACGTTACGAGTAACATCCATACAAGCGGATTTCGAA------------------------------------------TCTAGGATATCCACGTTAGAGCGCACGGCGGTCACTAGCGCGGGAGCTCCCCTCTCAATCCGTAATAACCGTATGACCATGGGATTAAATGATGGACTCACGTTGTCAGGGAATAAT---CTCGCCATCCGATTGCCAGGA---AATACGGGTCTGAATATTCAAAATGGTGGACTTCAGTTTCGATTTAATACTGATCAATTCCAGATAGTTAATAATAACTTGACTCTCAAGACGACTGTGTTTGATTCTATCAACTCAAGGATAGGCGCAACTGAGCAAAGTTACGTGGCGTCGGCAGTGACTCCCTTGAGATTAAACAGTAGC------ACGAAGGTGCTGGATATGCTAATAGACAGTTCAACACTTGAAATTAAT---TCTAGTGGACAGCTAACTGTTAGATCGACATCCCCGAATTTGAGGTATCCGATAGCTGATGTTAGCGGCGGT------ATCGGAATGAGTCCAAATTATAGGTTTAGGCAGAGCATGTGGATAGGAATTGTCTCCTATTCTGGTAGTGGGCTGAATTGGAGGGTACAGGTGAACTCCGACATTTTTATTGTAGATGATTACATACATATATGTCTTCCAGCTTTTGACGGTTTCTCTATAGCTGACGGTGGAGATCTATCGTTGAACTTTGTTACCGGATTGTTACCACCGTTACTTACAGGAGACACTGAGCCCGCTTTTCATAATGACGTGGTCACATATGGAGCACAGACTGTAGCTATAGGGTTGTCGTCGGGTGGTGCGCCTCAGTATATGAGTAAGAATCTGTGGGTGGAGCAGTGGCAGGATGGAGTACTTCGGTTACGTGTTGAGGGGGGTGGCTCAATTACGCACTCAAACAGTAAGTGGCCTGCCATGACCGTTTCGTACCCGCGTAGTTTC
TRN  10010101100011000
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