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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF01422 - zf-NF-X1)
FAM  PF01422
PID  zf-NF-X1
DES  NF-X1 type zinc finger
IPR  IPR000967
ANO  21
ALN  33
AID  0.477664
APH  (((STC_DROME/527-546:0.30553,(NFX1_HUMAN/847-868:0.55661,(YNC3_YEAST/362-382:0.80240,STC_DROME/876-896:0.00000):0.24777):0.08156):0.19028,(((NFX1_HUMAN/490-509:0.46096,((NFX1_HUMAN/678-697:0.00000,STC_DROME/706-725:0.51834):0.95567,STC_DROME/585-604:0.28836):0.00000):0.40957,(NFX1_HUMAN/705-724:0.15538,STC_DROME/733-752:0.36302):0.18806):0.08823,(STC_DROME/844-867:0.43860,(NFX1_HUMAN/816-838:0.35913,YNC3_YEAST/586-606:0.36358):0.00000):0.00000):0.28115):0.30280,(NFX1_HUMAN/616-647:0.71018,(((NFX1_HUMAN/437-455:0.09088,STC_DROME/474-492:0.20571):0.36863,(NFX1_HUMAN/551-570:0.25337,YNC3_YEAST/159-177:0.61049):0.23393):0.37906,YNC3_YEAST/216-235:0.23521):0.00000):0.25839,(YNC3_YEAST/468-487:0.09672,STC_DROME/644-667:0.65642):0.00000);
ATP  (((STC_DROME/527-546,(NFX1_HUMAN/847-868,(YNC3_YEAST/362-382,STC_DROME/876-896))),(((NFX1_HUMAN/490-509,((NFX1_HUMAN/678-697,STC_DROME/706-725),STC_DROME/585-604)),(NFX1_HUMAN/705-724,STC_DROME/733-752)),(STC_DROME/844-867,(NFX1_HUMAN/816-838,YNC3_YEAST/586-606)))),(NFX1_HUMAN/616-647,(((NFX1_HUMAN/437-455,STC_DROME/474-492),(NFX1_HUMAN/551-570,YNC3_YEAST/159-177)),YNC3_YEAST/216-235)),(YNC3_YEAST/468-487,STC_DROME/644-667));
ATL  11.456
DNO  21
DLN  99
DID  0.504998
DPH  ((((((NFX1_HUMAN/705-724:0.21244,((YNC3_YEAST/362-382:0.52342,STC_DROME/876-896:0.00000):0.22075,((((NFX1_HUMAN/551-570:0.37667,YNC3_YEAST/216-235:0.34462):0.11205,((NFX1_HUMAN/437-455:0.23311,NFX1_HUMAN/847-868:0.52050):0.02450,STC_DROME/474-492:0.20360):0.15923):0.17180,NFX1_HUMAN/616-647:0.13219):0.16405,(((YNC3_YEAST/159-177:0.52970,YNC3_YEAST/586-606:0.25279):0.14787,((STC_DROME/644-667:0.23199,STC_DROME/527-546:0.28901):0.23410,YNC3_YEAST/468-487:0.02065):0.15119):0.12792,NFX1_HUMAN/816-838:0.19861):0.14521):0.04958):0.09672):0.10967,STC_DROME/733-752:0.22634):0.09551,STC_DROME/844-867:0.18967):0.07225,STC_DROME/585-604:0.34798):0.10412,NFX1_HUMAN/490-509:0.16415):0.40146,NFX1_HUMAN/678-697:0.12162,STC_DROME/706-725:0.34739);
DTP  ((((((NFX1_HUMAN/705-724,((YNC3_YEAST/362-382,STC_DROME/876-896),((((NFX1_HUMAN/551-570,YNC3_YEAST/216-235),((NFX1_HUMAN/437-455,NFX1_HUMAN/847-868),STC_DROME/474-492)),NFX1_HUMAN/616-647),(((YNC3_YEAST/159-177,YNC3_YEAST/586-606),((STC_DROME/644-667,STC_DROME/527-546),YNC3_YEAST/468-487)),NFX1_HUMAN/816-838)))),STC_DROME/733-752),STC_DROME/844-867),STC_DROME/585-604),NFX1_HUMAN/490-509),NFX1_HUMAN/678-697,STC_DROME/706-725);
DTL  8.05443
RID  0.477664
RPH  (((STC_DROME/527-546:0.30553,(NFX1_HUMAN/847-868:0.55661,(YNC3_YEAST/362-382:0.80240,STC_DROME/876-896:0.00000):0.24777):0.08156):0.19028,(((NFX1_HUMAN/490-509:0.46096,((NFX1_HUMAN/678-697:0.00000,STC_DROME/706-725:0.51834):0.95567,STC_DROME/585-604:0.28836):0.00000):0.40957,(NFX1_HUMAN/705-724:0.15538,STC_DROME/733-752:0.36302):0.18806):0.08823,(STC_DROME/844-867:0.43860,(NFX1_HUMAN/816-838:0.35913,YNC3_YEAST/586-606:0.36358):0.00000):0.00000):0.28115):0.30280,(NFX1_HUMAN/616-647:0.71018,(((NFX1_HUMAN/437-455:0.09088,STC_DROME/474-492:0.20571):0.36863,(NFX1_HUMAN/551-570:0.25337,YNC3_YEAST/159-177:0.61049):0.23393):0.37906,YNC3_YEAST/216-235:0.23521):0.00000):0.25839,(YNC3_YEAST/468-487:0.09672,STC_DROME/644-667:0.65642):0.00000);
RTP  (((STC_DROME/527-546,(NFX1_HUMAN/847-868,(YNC3_YEAST/362-382,STC_DROME/876-896))),(((NFX1_HUMAN/490-509,((NFX1_HUMAN/678-697,STC_DROME/706-725),STC_DROME/585-604)),(NFX1_HUMAN/705-724,STC_DROME/733-752)),(STC_DROME/844-867,(NFX1_HUMAN/816-838,YNC3_YEAST/586-606)))),(NFX1_HUMAN/616-647,(((NFX1_HUMAN/437-455,STC_DROME/474-492),(NFX1_HUMAN/551-570,YNC3_YEAST/159-177)),YNC3_YEAST/216-235)),(YNC3_YEAST/468-487,STC_DROME/644-667));
RTL  11.456
LNK  NFX1_HUMAN/437-455:Q12986:U15306
LNK  NFX1_HUMAN/490-509:Q12986:U15306
LNK  NFX1_HUMAN/551-570:Q12986:U15306
LNK  NFX1_HUMAN/616-647:Q12986:U15306
LNK  NFX1_HUMAN/678-697:Q12986:U15306
LNK  NFX1_HUMAN/705-724:Q12986:U15306
LNK  NFX1_HUMAN/816-838:Q12986:U15306
LNK  NFX1_HUMAN/847-868:Q12986:U15306
LNK  STC_DROME/474-492:P40798:U09306
LNK  STC_DROME/527-546:P40798:U09306
LNK  STC_DROME/585-604:P40798:U09306
LNK  STC_DROME/644-667:P40798:U09306
LNK  STC_DROME/706-725:P40798:U09306
LNK  STC_DROME/733-752:P40798:U09306
LNK  STC_DROME/844-867:P40798:U09306
LNK  STC_DROME/876-896:P40798:U09306
LNK  YNC3_YEAST/159-177:P53971:Z71299
LNK  YNC3_YEAST/216-235:P53971:Z71299
LNK  YNC3_YEAST/362-382:P53971:Z71299
LNK  YNC3_YEAST/468-487:P53971:Z71299
LNK  YNC3_YEAST/586-606:P53971:Z71299
AMK  xx.x.xxxxxxxxxxxxxxxxx........xxx
DMK  xxxxxx...xxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................xxxxxxxxx
NAM  YNC3_YEAST/586-606
ASQ  CY.-.--HTCQKTCHLPGNCQK.......vCKQ
DSQ  TGTTAT...---...------CATACCTGCCAAAAAACATGTCATTTACCAGGAAATTGCCAAAAG.....................gtgTGTAAACAG
TRN  11111101111011010
NAM  NFX1_HUMAN/816-838
ASQ  CG.-.-MHKCQRLCHK-GECLVdep.....CKQ
DSQ  TGTGGG...---...---ATGCACAAATGTCAGAGACTCTGTCACAAA---GGGGAGTGTCTTGTGgatgagccc...............TGCAAGCAG
TRN  10010101110011011
NAM  STC_DROME/844-867
ASQ  CG.-.-GHKCIKPCHE-GPCQS....ageiCRQ
DSQ  TGTGGC...---...---GGGCACAAGTGTATAAAGCCGTGTCACGAG---GGCCCCTGTCAGTCT............gccggcgagataTGCCGGCAG
TRN  10010111110111011
NAM  STC_DROME/733-752
ASQ  CG.-.-KHKCDQPCHR-GNCPP........CYR
DSQ  TGTGGC...---...---AAACACAAGTGCGATCAGCCGTGTCACCGC---GGCAATTGTCCGCCA........................TGCTACCGC
TRN  11111101111011011
NAM  NFX1_HUMAN/705-724
ASQ  CG.-.-LHRCEEPCHR-GNCQT........CWQ
DSQ  TGTGGC...---...---CTTCATAGGTGTGAAGAACCTTGTCATCGT---GGAAACTGCCAGACA........................TGCTGGCAA
TRN  10010101110011011
NAM  YNC3_YEAST/468-487
ASQ  CG.-.-IHKCQRKCHP-GKCPP........CLE
DSQ  TGTGGA...---...---ATTCATAAATGTCAGAGAAAATGTCACCCA---GGAAAGTGTCCGCCC........................TGTTTAGAG
TRN  10110101110011010
NAM  STC_DROME/876-896
ASQ  CG.-.--HKCAAACHE-GACPEtp......CKE
DSQ  TGTGGT...---...------CATAAGTGTGCAGCTGCCTGTCACGAG---GGAGCCTGTCCGGAAacgcct..................TGCAAGGAG
TRN  11111111111111111
NAM  STC_DROME/527-546
ASQ  CG.-.-EHRCQAECHS-GKCAA........CSE
DSQ  TGTGGC...---...---GAGCATCGCTGCCAGGCGGAGTGCCACTCG---GGCAAGTGCGCGGCG........................TGTTCCGAG
TRN  11111111111111111
NAM  STC_DROME/585-604
ASQ  CG.-.-HHKCKDSCHA-GSCRP........CKL
DSQ  TGCGGC...---...---CACCACAAGTGCAAGGACTCCTGCCACGCG---GGAAGTTGTAGACCC........................TGCAAGCTG
TRN  10010101100011011
NAM  NFX1_HUMAN/847-868
ASQ  CG.-.--HPCMAPCHTSSPCPVta......CKA
DSQ  TGTGGG...---...------CACCCCTGTATGGCACCCTGCCATACCAGCTCACCCTGCCCTGTGactgct..................TGTAAAGCT
TRN  11111101111011001
NAM  YNC3_YEAST/216-235
ASQ  CS.-.-IHTCKKKCHP-GLCGP........CPE
DSQ  TGCTCC...---...---ATCCACACCTGTAAAAAGAAATGCCACCCT---GGCTTATGTGGGCCA........................TGTCCAGAA
TRN  11111101111011010
NAM  NFX1_HUMAN/616-647
ASQ  CGsLdFIHTCEKLCHE-GDCGPvsrtsvisCRC
DSQ  TGTGGTtccTTAgatTTCATTCATACCTGTGAAAAGCTCTGCCATGAA---GGAGACTGTGGACCAgtctctcgcacatcagttatttccTGCAGATGC
TRN  10010101110011000
NAM  STC_DROME/644-667
ASQ  CGkPaHPHQCGSKCHL-GQCPP........CPK
DSQ  TGTGGAaagCCAgcgCATCCGCATCAATGCGGAAGCAAATGTCACTTG---GGCCAGTGCCCTCCA........................TGTCCCAAG
TRN  11111101111011011
NAM  NFX1_HUMAN/490-509
ASQ  CG.-.-QHQCAELCHG-GQCQP........CQI
DSQ  TGTGGT...---...---CAGCACCAGTGTGCTGAGCTGTGCCATGGG---GGTCAGTGCCAGCCT........................TGCCAGATC
TRN  11011111101111111
NAM  STC_DROME/474-492
ASQ  CS.-.--HACTLLCHP-GPCPP........CQA
DSQ  TGTAGC...---...------CATGCCTGCACTCTGCTCTGTCACCCA---GGCCCTTGTCCGCCG........................TGCCAGGCC
TRN  11011111101111111
NAM  NFX1_HUMAN/437-455
ASQ  CP.-.--HSCNLLCHP-GPCPP........CPA
DSQ  TGCCCA...---...------CATTCCTGTAACCTTCTCTGCCATCCA---GGACCCTGCCCACCC........................TGCCCTGCC
TRN  11011111111111111
NAM  YNC3_YEAST/159-177
ASQ  CM.-.--HGCSKICHL-GPHPE........CTR
DSQ  TGTATG...---...------CATGGTTGTTCCAAAATTTGTCATCTA---GGGCCGCATCCAGAG........................TGTACTAGA
TRN  10010101110011011
NAM  NFX1_HUMAN/551-570
ASQ  CG.-.-NHTCSQVCHP-QPCQQ........CPR
DSQ  TGCGGT...---...---AACCATACATGTTCGCAAGTGTGCCACCCT---CAGCCCTGCCAGCAA........................TGCCCACGG
TRN  11111111111111111
NAM  YNC3_YEAST/362-382
ASQ  CG.-.-KHSCPFTCHD-KACMEp.......CLQ
DSQ  TGTGGC...---...---AAACATTCGTGCCCCTTCACTTGTCATGAT---AAAGCCTGTATGGAAccc.....................TGCTTGCAA
TRN  11111101111011011
NAM  STC_DROME/706-725
ASQ  CG.-.-KHKCNVECCIDIDHD-........CPL
DSQ  TGTGGA...---...---AAGCACAAGTGCAACGTTGAGTGCTGCATCGATATAGACCACGAC---........................TGTCCACTG
TRN  10010111100111011
NAM  NFX1_HUMAN/678-697
ASQ  CG.-.-RHKCNEICCVDKEHK-........CPL
DSQ  TGTGGA...---...---CGGCATAAATGTAATGAGATATGCTGTGTGGATAAGGAGCACAAG---........................TGTCCTTTG
TRN  10010101110011011
//