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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View summary and phylogenies for PF01093 - Clusterin) |
FAM PF01093 PID Clusterin DES Clusterin IPR IPR000753 ANO 5 ALN 457 AID 0.64669 APH (((CLUS_MOUSE/1-448:0.18421,CLUS_HUMAN/2-449:0.08628):0.04403,CLUS_COTJA/2-451:0.78819):0.07168,CLUS_BOVIN/1-439:0.18081,CLUS_CANFA/2-445:0.07271); ATP (((CLUS_MOUSE/1-448,CLUS_HUMAN/2-449),CLUS_COTJA/2-451),CLUS_BOVIN/1-439,CLUS_CANFA/2-445); ATL 1.42791 DNO 5 DLN 1371 DID 0.711745 DPH (((CLUS_MOUSE/1-448:0.14403,CLUS_HUMAN/2-449:0.07485):0.03022,CLUS_COTJA/2-451:0.55006):0.02851,CLUS_BOVIN/1-439:0.13152,CLUS_CANFA/2-445:0.09296); DTP (((CLUS_MOUSE/1-448,CLUS_HUMAN/2-449),CLUS_COTJA/2-451),CLUS_BOVIN/1-439,CLUS_CANFA/2-445); DTL 1.05215 RID 0.64669 RPH (((CLUS_MOUSE/1-448:0.18421,CLUS_HUMAN/2-449:0.08628):0.04403,CLUS_COTJA/2-451:0.78819):0.07168,CLUS_BOVIN/1-439:0.18081,CLUS_CANFA/2-445:0.07271); RTP (((CLUS_MOUSE/1-448,CLUS_HUMAN/2-449),CLUS_COTJA/2-451),CLUS_BOVIN/1-439,CLUS_CANFA/2-445); RTL 1.42791 LNK CLUS_BOVIN/1-439:P17697:J05391 LNK CLUS_CANFA/2-445:P25473:M55251 LNK CLUS_COTJA/2-451:P14018:X80760 LNK CLUS_HUMAN/2-449:P10909:X14723 LNK CLUS_MOUSE/1-448:Q06890:D14077 AMK xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx DMK 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NAM CLUS_MOUSE/1-448 ASQ MKILLLCVALLLIWDNGMVLGEQEVSDNELQELSTQGSRYINKEIQNAVQGVKHIKTLIEKTNAERKSLLNSLEEAKKKKEDALEDTRDSEMKLKAFPEVCNETMMALWEECKPCLKHTCMKFYARVCRSGSGLVGQQLEEFLNQSSPFYFWMNGDRIDSLLESDRQQSQVLDAMQDSFARASGIIDTLFQDRFFARELHDPHYFS-PIGFPHKR------PHFLYPKSRLVRSLMSPSHYGPPSFHNMFQPFFEMIHQAQQAMDVQLHSPAFQFPDVDFLREGEDDRTVCKEIRRNSTGCLKMKGQCEKCQEILSVDCSTNNPAQANLRQELNDSLQVAERLTEQYKELLQSFQSKMLNTSSLLEQLNDQFNWVSQLANLTQGEDKYYLRVSTVTTHSSDSEVPSR--VTEVVVKLFDSDPITVVLPEEVSKDNPKFMDTVAEKALQEYRRKSRAE DSQ ATGAAGATTCTCCTGCTGTGCGTGGCACTGCTGCTGATCTGGGACAATGGCATGGTCCTGGGAGAGCAGGAGGTCTCTGACAATGAGCTCCAAGAACTGTCCACTCAAGGGAGTAGGTATATTAATAAGGAGATTCAGAACGCCGTCCAGGGAGTGAAGCACATAAAAACTCTCATAGAAAAAACCAACGCAGAGCGCAAGTCCTTGCTCAACAGTTTAGAGGAAGCCAAGAAGAAGAAAGAGGATGCTCTGGAGGACACTAGGGATTCTGAAATGAAGCTGAAGGCATTCCCGGAAGTGTGTAACGAGACCATGATGGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGAAGCATACCTGCATGAAGTTCTATGCACGTGTCTGCAGGAGCGGCTCAGGGCTGGTCGGCCAGCAGCTAGAGGAGTTTCTAAACCAGAGCTCACCCTTCTACTTCTGGATGAACGGCGACCGCATCGACTCCCTGCTGGAGAGTGACCGGCAGCAGAGCCAAGTCCTGGATGCCATGCAGGACAGCTTTGCTCGGGCATCTGGCATCATAGACACGCTCTTTCAGGACCGGTTCTTCGCCCGTGAGCTTCATGACCCCCACTACTTCTCC---CCCATCGGCTTCCCACACAAGAGG------------------CCTCATTTCTTATATCCCAAGTCCCGCTTGGTCCGCAGCCTCATGTCTCCCTCCCACTATGGGCCTCCGAGCTTCCACAACATGTTCCAGCCTTTCTTTGAGATGATCCACCAGGCTCAACAGGCCATGGATGTCCAGCTCCACAGCCCAGCCTTCCAGTTCCCAGACGTGGATTTCTTAAGAGAAGGTGAAGATGACCGCACTGTGTGCAAGGAGATCCGCCGCAACTCCACAGGATGCCTGAAGATGAAGGGCCAGTGTGAAAAGTGCCAGGAGATCTTGTCTGTGGACTGTTCAACCAACAATCCTGCCCAGGCTAACCTGCGCCAGGAGCTGAACGACTCGCTCCAGGTGGCCGAGAGGCTGACAGAGCAGTACAAGGAGCTGCTGCAGTCCTTCCAGTCGAAGATGCTCAACACCTCATCCCTGCTGGAGCAGCTGAACGACCAGTTCAACTGGGTGTCCCAGCTGGCTAACCTCACACAGGGCGAAGACAAGTACTACCTTCGGGTCTCCACCGTGACCACCCATTCCTCTGACTCAGAGGTCCCCTCCCGT------GTCACTGAGGTGGTGGTGAAGCTGTTTGACTCTGACCCCATCACAGTGGTGTTACCAGAAGAAGTCTCTAAGGATAACCCTAAGTTTATGGACACAGTGGCGGAGAAGGCGCTACAGGAATACCGCAGGAAAAGCCGTGCGGAA TRN 10010101100011000 NAM CLUS_HUMAN/2-449 ASQ MKTLLLFVGLLLTWESGQVLGDQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVCNETMMALWEECKPCLKQTCMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGDRIDSLLENDRQQTHMLDVMQDHFSRASSIIDELFQDRFFTREPQDTYHYL-PFSLPHRR------PHFFFPKSRIVRSLMPFSPYEPLNFHAMFQPFLEMIHEAQQAMDIHFHSPAFQHPPTEFIREGDDDRTVCREIRHNSTGCLRMKDQCDKCREILSVDCSTNNPSQAKLRRELDESLQVAERLTRKYNELLKSYQWKMLNTSSLLEQLNEQFNWVSRLANLTQGEDQYYLRVTTVASHTSDSDVPSG--VTEVVVKLFDSDPITVTVPVEVSRKNPKFMETVAEKALQEYRKKHREE DSQ ATGAAGACTCTGCTGCTGTTTGTGGGGCTGCTGCTGACCTGGGAGAGTGGGCAGGTCCTGGGGGACCAGACGGTCTCAGACAATGAGCTCCAGGAAATGTCCAATCAGGGAAGTAAGTACGTCAATAAGGAAATTCAAAATGCTGTCAACGGGGTGAAACAGATAAAGACTCTCATAGAAAAAACAAACGAAGAGCGCAAGACACTGCTCAGCAACCTAGAAGAAGCCAAGAAGAAGAAAGAGGATGCCCTAAATGAGACCAGGGAATCAGAGACAAAGCTGAAGGAGCTCCCAGGAGTGTGCAATGAGACCATGATGGCCCTCTGGGAAGAGTGTAAGCCCTGCCTGAAACAGACCTGCATGAAGTTCTACGCACGCGTCTGCAGAAGTGGCTCAGGCCTGGTTGGCCGCCAGCTTGAGGAGTTCCTGAACCAGAGCTCGCCCTTCTACTTCTGGATGAATGGTGACCGCATCGACTCCCTGCTGGAGAACGACCGGCAGCAGACGCACATGCTGGATGTCATGCAGGACCACTTCAGCCGCGCGTCCAGCATCATAGACGAGCTCTTCCAGGACAGGTTCTTCACCCGGGAGCCCCAGGATACCTACCACTACCTG---CCCTTCAGCCTGCCCCACCGGAGG------------------CCTCACTTCTTCTTTCCCAAGTCCCGCATCGTCCGCAGCTTGATGCCCTTCTCTCCGTACGAGCCCCTGAACTTCCACGCCATGTTCCAGCCCTTCCTTGAGATGATACACGAGGCTCAGCAGGCCATGGACATCCACTTCCACAGCCCGGCCTTCCAGCACCCGCCAACAGAATTCATACGAGAAGGCGACGATGACCGGACTGTGTGCCGGGAGATCCGCCACAACTCCACGGGCTGCCTGCGGATGAAGGACCAGTGTGACAAGTGCCGGGAGATCTTGTCTGTGGACTGTTCCACCAACAACCCCTCCCAGGCTAAGCTGCGGCGGGAGCTCGACGAATCCCTCCAGGTCGCTGAGAGGTTGACCAGGAAATACAACGAGCTGCTAAAGTCCTACCAGTGGAAGATGCTCAACACCTCCTCCTTGCTGGAGCAGCTGAACGAGCAGTTTAACTGGGTGTCCCGGCTGGCAAACCTCACGCAAGGCGAAGACCAGTACTATCTGCGGGTCACCACGGTGGCTTCCCACACTTCTGACTCGGACGTTCCTTCCGGT------GTCACTGAGGTGGTCGTGAAGCTCTTTGACTCTGATCCCATCACTGTGACGGTCCCTGTAGAAGTCTCCAGGAAGAACCCTAAATTTATGGAGACCGTGGCGGAGAAAGCGCTGCAGGAATACCGCAAAAAGCACCGGGAGGAG TRN 10010101100011001 NAM CLUS_CANFA/2-445 ASQ MKTLLLLVGLLLTWDNGRVLGDQAVSDTELQEMSTEGSKYINKEIKNALKGVKQIKTLIEQTNEERKSLLSNLEEAKKKKEDALNDTKDSETKLKASQGVCNDTMMALWEECKPCLKQTCMKFYARVCRSGSGLVGHQLEEFLNQSSPFYFWMNGDRIDSLLENDRQQTHALDVMQDSFNRASSIMDELFQDRFFTREPQDTYHYS-PFSLFQR-------RPFFNPKFRIARNIIPFPRFQPLNFHDMFQPFFDMIHQAQQAMDVNLHRIPYHFP-IEFPEE--DNRTVCKEIRHNSTGCLKMKDQCEKCQEILSVDCSSNNPAQVQLRQELSNSLQIAEKFTKLYDELLQSYQEKMFNTSSLLKQLNEQFSWVSQLANLTQSEDPFYLQVTTVGSQTSDSNVPVG--FTKVVVKLFDSDPITVMIPEAVSRNNPKFMETVAEKALQEYRQKHREE DSQ ATGAAGACTCTCCTGCTGCTGGTGGGGCTGCTGCTGACCTGGGACAATGGACGGGTTCTGGGAGACCAGGCTGTCTCAGACACCGAGCTCCAGGAAATGTCCACCGAAGGTAGTAAGTACATTAATAAGGAAATAAAAAATGCTCTCAAGGGGGTGAAACAGATAAAGACCCTAATAGAACAGACAAACGAAGAGCGCAAATCACTGCTCAGCAACCTGGAGGAAGCCAAGAAGAAGAAAGAGGATGCACTAAATGATACCAAGGATTCTGAAACGAAGCTGAAGGCGTCCCAGGGGGTGTGCAATGACACCATGATGGCCCTCTGGGAGGAGTGCAAGCCCTGCCTGAAACAGACCTGCATGAAGTTCTACGCACGTGTCTGCAGAAGTGGCTCGGGGCTAGTTGGCCACCAGCTCGAGGAGTTCCTGAACCAGAGTTCTCCCTTCTACTTCTGGATGAATGGCGATCGTATCGACTCCCTGCTGGAGAACGACCGGCAGCAGACCCACGCCCTGGACGTCATGCAGGACAGCTTCAACCGGGCATCCAGCATCATGGATGAGCTTTTCCAGGACAGATTCTTCACCCGGGAGCCCCAGGATACTTACCACTACTCA---CCCTTCAGCTTATTCCAGAGG---------------------AGGCCTTTCTTCAATCCCAAATTTCGCATCGCCCGGAACATAATACCTTTCCCTAGATTCCAGCCCTTAAACTTCCATGACATGTTTCAGCCCTTCTTTGACATGATACACCAGGCTCAACAGGCCATGGATGTTAACCTGCATAGAATTCCTTACCACTTCCCA---ATTGAATTCCCAGAAGAA------GATAACCGCACCGTGTGCAAGGAGATCCGTCACAACTCCACAGGTTGCCTGAAAATGAAGGACCAGTGTGAAAAGTGCCAGGAGATCTTGTCAGTGGATTGTTCTTCCAACAACCCTGCGCAGGTCCAGCTGCGACAGGAACTTAGTAATTCCCTCCAGATTGCGGAGAAGTTCACCAAGCTCTACGACGAGCTGCTGCAGTCCTACCAGGAGAAGATGTTCAACACGTCCTCCCTGCTGAAGCAGCTGAACGAGCAGTTTAGCTGGGTGTCCCAACTGGCTAACCTCACTCAAAGTGAAGACCCATTCTATCTCCAGGTCACGACGGTGGGTTCTCAGACTTCTGACTCCAATGTTCCCGTGGGC------TTCACTAAGGTGGTTGTGAAGCTCTTTGATTCTGACCCCATCACGGTGATGATCCCAGAAGCAGTCTCCAGGAACAATCCTAAATTTATGGAGACTGTGGCAGAGAAGGCTCTTCAGGAGTATCGCCAAAAGCACCGAGAGGAA TRN 10010101100011000 NAM CLUS_BOVIN/1-439 ASQ MKTLLLLMGLLLSWESG-----WAISDKELQEMSTEGSKYVNKEIKNALKEVKQIKTQIEQTNEERKLLLSSLEEAKKKKEDALNDTRDSENKLKASQGVCNETMTALWEECKPCLKQTCMKFYARVCRSGSGLVGHQLEEFLNQSSPFYFWINGDRIDSLMENDREQSHVMDVMEDSFTRASSIMDELFQDRFFLRRPQDTQYYS-PFSSFPRG------SLFFNPKSRFARNVMPFPLLEPFNFHDVFQPFYDMIHQAQQAMDAHLQRTPYHFPTMEFTEN--NDRTVCKEIRHNSTGCLRMKDQCEKCQEILEVDCSASNPTQTLLRQQLNASLQLAEKFSRLYDQLLQSYQQKMLNTSALLKQLNEQFTWVSQLANLTQSDDQHYLQVFTVNSHNSDPSIPSG--LTKVIVKLFNSFPITVTVPQEVS--SPNFMENVAEKALQQYRRKSQEE DSQ ATGAAGACTCTACTGCTGTTGATGGGGCTGCTGCTCAGCTGGGAGAGTGGC---------------TGGGCAATCTCGGACAAAGAGCTCCAGGAAATGTCCACCGAGGGGAGTAAGTACGTGAATAAAGAAATTAAAAATGCCCTCAAGGAGGTGAAACAGATAAAGACCCAAATAGAACAAACCAATGAAGAGCGCAAATTACTGCTCAGCTCCCTAGAGGAAGCCAAGAAGAAGAAAGAGGACGCCCTGAATGACACCAGGGATTCTGAAAACAAGCTGAAGGCGTCCCAGGGGGTGTGCAATGAGACCATGACAGCCCTTTGGGAGGAATGTAAGCCCTGCCTCAAGCAGACCTGCATGAAGTTCTACGCGCGGGTGTGCAGAAGCGGATCGGGACTGGTTGGCCACCAGCTTGAGGAGTTCCTAAACCAGAGCTCCCCCTTCTACTTCTGGATCAACGGTGACCGCATCGATTCCCTGATGGAGAATGACCGGGAGCAGAGCCACGTGATGGACGTCATGGAGGACAGCTTCACCCGGGCGTCCAGCATCATGGACGAGCTCTTCCAGGACCGGTTCTTCCTCCGGAGGCCCCAGGACACTCAGTACTACTCC---CCCTTCAGCTCGTTCCCGAGGGGG------------------TCACTCTTCTTCAATCCCAAGTCCCGCTTTGCCCGGAACGTGATGCCTTTCCCCTTGTTGGAACCCTTCAACTTCCACGATGTGTTTCAGCCCTTCTACGACATGATCCACCAGGCCCAGCAGGCCATGGACGCCCACCTGCAGAGGACTCCCTACCACTTCCCCACGATGGAATTCACAGAAAAC------AACGACCGTACTGTGTGTAAGGAGATCCGCCACAACTCCACGGGATGCCTGCGGATGAAGGACCAGTGCGAGAAGTGCCAGGAGATCCTGGAAGTGGACTGTTCGGCCAGCAACCCGACTCAGACGCTGCTGCGCCAGCAGCTGAACGCATCCCTGCAGCTGGCGGAGAAGTTCAGCAGGCTGTACGACCAGCTGCTCCAGTCCTACCAGCAGAAGATGCTCAACACGTCGGCCCTGCTCAAGCAGCTGAACGAGCAGTTCACCTGGGTGTCCCAGCTGGCCAACCTCACGCAGAGCGACGACCAGCACTACCTGCAGGTCTTCACGGTGAATTCCCACAACTCCGACCCCAGCATCCCGTCTGGC------CTCACCAAGGTGATTGTGAAACTCTTCAACTCCTTCCCCATCACAGTGACGGTCCCGCAGGAAGTCTCC------AGTCCTAACTTCATGGAGAATGTGGCAGAGAAAGCACTGCAGCAATACCGCCGGAAGAGCCAGGAGGAG TRN 10010101100011000 NAM CLUS_COTJA/2-451 ASQ ELPLLALLSLGLVCQGGQ----GLVPPNELKQLSAAGSKYIDAEVENAINGVKQMKTLMDKTSKEHQAMLHTLEETKKKKEEAVKLALEKEKQLAEKQEVCNETMLSLWEECKPCLKHTCMRVYSKMCHSGSGLVGRQLEEFLNRSSPFSIWVNGERIDDLLDREQRQERRFEDLEERFGLMEDGVEDIFQDSTQLYGPAFPFFRTPPFGGFREAFVPPVQRVHLVPRRRLSRELHPFFQHPMHGFHRLFQPLFEMTQHMLDGGHGAWEHPLGGFATESRNFS--TDRMVCREIRRNSAGCLRMRDECEKCREILAVDCSQTDPVQSQLREQFEDALRLAERFTRRYDDLLSAFQAEMLNTSSLLDQLNRQFGWVSRLGNLTQGND-GFLQVTTVFSKTPNLEDPSAPADTQVTVQLFDSEPLSLTVPGDISWDDPRFMEIVAEQALQHYKQNNTIE DSQ GAGCTGCCGCTGCTCGCCCTGCTCAGCCTGGGGCTCGTCTGCCAGGGGGGGCAA------------GGCCTTGTGCCCCCCAATGAGCTGAAACAGCTCTCAGCAGCCGGCAGCAAATACATTGACGCTGAAGTGGAGAACGCCATCAATGGGGTGAAGCAGATGAAGACACTGATGGACAAGACCAGCAAGGAGCACCAGGCCATGCTGCACACACTGGAAGAGACCAAGAAGAAGAAGGAGGAAGCAGTGAAGCTGGCCTTGGAGAAGGAGAAGCAGCTGGCAGAGAAGCAGGAGGTTTGCAATGAGACGATGCTGTCGCTGTGGGAGGAGTGCAAGCCCTGCCTCAAACACACCTGCATGCGCGTCTACTCCAAGATGTGCCACAGCGGCTCGGGGCTGGTGGGCCGCCAGCTGGAGGAGTTCCTCAACCGCTCCTCGCCCTTCTCCATCTGGGTGAACGGCGAGCGCATCGATGATCTGCTGGATCGGGAGCAGCGGCAGGAGCGGCGCTTTGAGGACCTGGAGGAGCGCTTTGGGCTGATGGAGGATGGAGTGGAGGACATCTTCCAGGACAGCACGCAGCTCTATGGGCCTGCCTTCCCCTTCTTCCGAACGCCTCCCTTTGGTGGTTTCCGTGAAGCTTTCGTCCCACCTGTGCAACGTGTCCACCTGGTGCCACGCAGGAGGCTGTCCCGAGAGCTGCACCCTTTCTTTCAGCACCCAATGCATGGCTTCCATCGCCTCTTCCAGCCGCTCTTTGAGATGACGCAGCACATGCTGGATGGGGGGCACGGCGCCTGGGAGCACCCGCTGGGGGGCTTTGCGACAGAGTCCCGTAACTTCAGC------ACTGATCGCATGGTGTGCCGTGAGATCCGGCGCAACTCAGCTGGCTGCCTGAGGATGAGGGATGAGTGCGAGAAGTGCCGGGAGATCTTGGCTGTAGACTGCTCCCAGACAGACCCGGTGCAGAGCCAGCTGAGGGAGCAGTTTGAGGACGCCCTGCGCTTGGCCGAGCGCTTCACCCGCCGCTACGATGACCTCCTCAGCGCCTTCCAGGCCGAGATGCTCAACACCAGCAGCCTCCTGGACCAGCTCAACCGCCAGTTCGGTTGGGTCTCACGCCTGGGCAACCTCACACAGGGCAACGAT---GGGTTCCTGCAGGTCACCACGGTGTTCTCCAAAACTCCCAACCTTGAGGACCCGTCAGCCCCTGCCGACACGCAGGTGACGGTGCAGCTCTTTGACTCGGAGCCGCTGTCGCTCACCGTGCCCGGGGACATCTCCTGGGATGATCCACGCTTCATGGAGATCGTAGCCGAGCAGGCGCTGCAGCACTACAAGCAGAACAACACCATAGAG TRN 10010101100011001 //