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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF01090 - Ribosomal_S19e)
FAM  PF01090
PID  Ribosomal_S19e
DES  Ribosomal protein S19e
IPR  IPR001266
ANO  8
ALN  142
AID  0.512127
APH  ((RS19_MYAAR/3-142:0.20059,(RS19G_ASCSU/5-145:0.46686,(RS19A_DROME/3-142:0.28811,RS19_HUMAN/3-142:0.20505):0.07319):0.07683):0.13456,((RS19_EMENI/4-144:0.16789,RS19A_YEAST/3-143:0.26361):0.23336,RS19E_METJA/2-139:0.67817):0.14265,RS19_ORYSA/7-146:0.33870);
ATP  ((RS19_MYAAR/3-142,(RS19G_ASCSU/5-145,(RS19A_DROME/3-142,RS19_HUMAN/3-142))),((RS19_EMENI/4-144,RS19A_YEAST/3-143),RS19E_METJA/2-139),RS19_ORYSA/7-146);
ATL  3.26958
DNO  8
DLN  426
DID  0.529896
DPH  ((((RS19E_METJA/2-139:0.62476,RS19G_ASCSU/5-145:0.30761):0.19852,(RS19_MYAAR/3-142:0.22492,RS19_ORYSA/7-146:0.28464):0.07574):0.05144,(RS19A_DROME/3-142:0.23691,RS19_HUMAN/3-142:0.26775):0.05774):0.21329,RS19A_YEAST/3-143:0.31251,RS19_EMENI/4-144:0.21039);
DTP  ((((RS19E_METJA/2-139,RS19G_ASCSU/5-145),(RS19_MYAAR/3-142,RS19_ORYSA/7-146)),(RS19A_DROME/3-142,RS19_HUMAN/3-142)),RS19A_YEAST/3-143,RS19_EMENI/4-144);
DTL  3.06622
RID  0.512127
RPH  ((RS19_MYAAR/3-142:0.20059,(RS19G_ASCSU/5-145:0.46686,(RS19A_DROME/3-142:0.28811,RS19_HUMAN/3-142:0.20505):0.07319):0.07683):0.13456,((RS19_EMENI/4-144:0.16789,RS19A_YEAST/3-143:0.26361):0.23336,RS19E_METJA/2-139:0.67817):0.14265,RS19_ORYSA/7-146:0.33870);
RTP  ((RS19_MYAAR/3-142,(RS19G_ASCSU/5-145,(RS19A_DROME/3-142,RS19_HUMAN/3-142))),((RS19_EMENI/4-144,RS19A_YEAST/3-143),RS19E_METJA/2-139),RS19_ORYSA/7-146);
RTL  3.26958
LNK  RS19A_DROME/3-142:P39018:AF216206
LNK  RS19A_YEAST/3-143:P07280:X02635
LNK  RS19_EMENI/4-144:P27073:M65259
LNK  RS19E_METJA/2-139:P54057:U67516
LNK  RS19G_ASCSU/5-145:P24494:M59417
LNK  RS19_HUMAN/3-142:P39019:M81757
LNK  RS19_MYAAR/3-142:Q94613:U63092
LNK  RS19_ORYSA/7-146:P40978:AC114983
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  RS19_ORYSA/7-146
ASQ  RTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPD.WYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKG-GRLITSQGRRDLDQVAGRVDVTIA
DSQ  AGGACGGTGAAGGACGTGAACCCTCATGAGTTCGTCAAGGCCTACTCCGCCCACCTCAAGCGCTCCGGCAAGATGGAGCTCCCTGAGTGGGTTGACATCGTGAAGACTGCGAGGTTCAAGGAGCTCCCTCCTTATGATCCGGAC...TGGTACTACACGAGGGCTGCCTCGATTGCAAGGAAGATCTACCTGAGGCAGGGTATTGGTGTAGGTGGCTTCCAGAAGATCTATGGTGGCCGCCAGAGGAACGGCTCACGCCCCCCGCACTTCTGCAAGAGCAGCGGCGCTATCTCACGCAACATCCTTCAGCAGCTGCAGAAGATGGGCATCATTGATGTCGACCCGAAGGGT---GGAAGACTCATCACCTCCCAGGGAAGGCGTGATCTGGACCAAGTGGCCGGAAGAGTTGATGTTACCATCGCC
TRN  10010101100011001
NAM  RS19_MYAAR/3-142
ASQ  ISVKDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPD.WYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNG-GRRLTSQGRRDLDRIAAQIAPKRA
DSQ  ATCTCGGTGAAAGACGTGAGCAGTCATGAGTTCACCAGGGCTTTTGCAGCCTTTCTGAAAAAGTCCGGGAAGATGAAGGTCCCAGAGTGGACAGACTTTGTGAAGACTGGCATGTTCAAGGAACTGTCTCCCTATGAGCCTGAC...TGGTACTTCATCAGAGCAGCCTCAATCTGCAGACATCTGTACATCAGATCACCAGCCGGTATTGGATCTTTTGAGAAAATCTATGGAGGTCGCCGTAGGCGCGGAACAGCCCCCAGCCACTTCTGCAAGGCTAACGGCTCAATCTCCCGCAGACTCCTCCAGAGTCTTGAGGGGCTCAAAATTGTCGAGAAGGATCCCAACGGT---GGTCGCCGCCTGACCTCCCAGGGCCGCCGTGATCTTGACAGAATAGCCGCCCAAATTGCCCCAAAGAGGGCA
TRN  10010101100011001
NAM  RS19_HUMAN/3-142
ASQ  VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDEN.WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDG-GRKLTPQGQRDLDRIAGQVAAANK
DSQ  GTTACTGTAAAAGACGTGAACCAGCAGGAGTTCGTCAGAGCTCTGGCAGCCTTCCTCAAAAAGTCCGGGAAGCTGAAAGTCCCCGAATGGGTGGATACCGTCAAGCTGGCCAAGCACAAAGAGCTTGCTCCCTACGATGAGAAC...TGGTTCTACACGCGAGCTGCTTCCACAGCGCGGCACCTGTACCTCCGGGGTGGCGCTGGGGTTGGCTCCATGACCAAGATCTATGGGGGACGTCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAGGGGCTGAAAATGGTGGAAAAGGACCAAGATGGC---GGCCGCAAACTGACACCTCAGGGACAAAGAGATCTGGACAGAATCGCCGGACAGGTGGCAGCTGCCAACAAG
TRN  10010101100011011
NAM  RS19A_DROME/3-142
ASQ  VTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPD.WFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDG-GRKLSSIGQRDLDRIANQIVFKQR
DSQ  GTCACAGTGAAGGATATTGACCAGCACGCGGTTACCAAGGCGGTCGCCGTCTTCTTGAAGAAGACTGGCAAGTTGAAGGTGCCCGACCAGATGGACATCGTCAAGACCGCCAAATTCAAGGAGCTGGCGCCCTACGATCCCGAC...TGGTTCTATGTGCGTTGCGCCTCGATCCTGCGCCATCTGTACCACCGCAGTCCCGCTGGAGTCGGTTCGATCACCAAGATCTACGGCGGACGCAAGCGCAACGGTGTCCACCCCTCGCACTTCTGCCGCGCCGCCGACGGTGCTGCCCGCAAGGCTCTGCAGGCCTTGGAGCACGCCCGTTTGGTCGAGAAGCACCCGGACGGT---GGTCGCAAACTGAGCTCCATTGGACAGCGTGATCTGGACCGTATTGCTAACCAGATCGTGTTCAAGCAGCGC
TRN  11011101101011011
NAM  RS19G_ASCSU/5-145
ASQ  TSVKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSD.WYYVRTASIARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTKQGRKDLDRIASQMRQNDR
DSQ  ACTAGCGTGAAGGATGTCGATCAACATGAAATTGTTCAGCATATCGCCAAGTTCTTAAAGAAGAGTGGTAAGGTGAAGGTGCCGGAATGGTCAGATGTTACTAAGATGGGTATTTCGAAGGAGCTAGCGCCTTTAAACAGCGAC...TGGTATTATGTGAGAACGGCGAGCATCGCACGACGCCTTTATGTGCGATCGCCAACGGGCGTTGATGCACTGAGGCTTGTCTATGGTGGCAGCAAACGACGTGGCGTGGTCCCTAATCATTTTGCCAAGGCTTCCGGCTCGGTAATCCGTAAAGCCCTGCAGACACTCGAGGCAATCAAATGGGTGCAGAAACATCCAGATGGTAACGGACGCGTACTTACCAAACAGGGAAGGAAGGATCTCGATCGAATTGCTTCTCAGATGCGTCAGAACGATCGG
TRN  10010101100011000
NAM  RS19_EMENI/4-144
ASQ  VTVRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDAD.WYYVRAAAVARHIYLRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDLDRIAKTTVDEEE
DSQ  GTCACCGTTCGCGATGTGGACGCGCAAAAGTTCATTGTGGCTTACGCCGCTTTCTTGAAGCGTCAGGGAAAGCTCCCCATCCCTGGTTGGGTTGACACTGTCAAGACCTCCGCCTCCAACGAGCTTCCTCCCCAGGACGCCGAC...TGGTACTACGTCCGTGCTGCCGCTGTTGCCCGTCACATCTACCTCCGCAAGACCGTCGGTGTTGGCCGTCTCCGCAAGGTTCACGGCTCTACCAAGAACCGTGGCTCCCGCCCCGCCCACCACGTCGATGCCTCCGGTGCCGTTGACCGCAAGGTCCTCCAGTCCCTTGAGAAGATTGGTGTCCTCGAGCAGGACGAGGAGAAGGGTGGCCGCCGCATCACACAGTCCGGACAGCGTGATCTTGACCGTATCGCCAAGACCACCGTTGACGAGGAGGAG
TRN  11011111111111111
NAM  RS19A_YEAST/3-143
ASQ  VSVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEgWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISP-KGGRRISENGQRDLDRIAAQTLEEDE
DSQ  GTTTCCGTTAGAGACGTTGCTGCTCAAGATTTCATTAATGCTTACGCTTCTTTCTTGCAAAGACAAGGTAAGCTAGAAGTTCCAGGTTACGTTGACATTGTCAAGACCTCTTCTGGTAACGAAATGCCACCACAAGATGCCGAAggtTGGTTCTACAAGCGTGCTGCCTCTGTTGCCAGACACATTTACATGAGAAAACAAGTTGGTGTTGGTAAATTGAACAAATTATACGGTGGTGCCAAGAGCAGAGGTGTTAGACCATACAAGCACATTGACGCTTCCGGTTCTATCAACAGAAAGGTTTTGCAAGCTTTGGAAAAGATTGGTATCGTCGAAATCTCTCCA---AAGGGTGGTAGAAGAATCTCTGAAAACGGTCAAAGAGATTTGGATCGTATTGCCGCTCAAACTTTGGAAGAAGACGAA
TRN  10010101110011010
NAM  RS19E_METJA/2-139
ASQ  VTVYDVPADKLIQKTAEKLKEMN-IGVPEWVDFVKTGVSRERRPDQDD.WWYIRCASILRKIYIYGPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPEG--RVVTPKGRSFLDNIAKEVRDEII
DSQ  GTAACTGTCTATGATGTTCCAGCTGATAAGTTAATTCAGAAGACAGCTGAGAAATTAAAAGAGATGAAT---ATAGGAGTTCCAGAATGGGTAGATTTTGTTAAGACAGGAGTTAGCAGAGAGAGAAGACCAGACCAAGATGAC...TGGTGGTATATAAGGTGTGCATCAATCTTAAGAAAAATCTATATTTACGGCCCAGTAGGTGTTTCAAGATTAAGAACTGCTTACGGAGGAAGAAAAAACAGAGGTCATGAACCAGAACACTTCTACAAAGGTAGTGGAAACATCATTAGAAAAGCTTTACAAGAATTAGAAAAATTAGGTTTAGTTGAAAAGACACCTGAGGGA------AGAGTTGTTACTCCAAAAGGAAGAAGTTTCTTAGACAACATTGCTAAAGAGGTTAGGGATGAAATAATT
TRN  10010101110011000
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