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PANDIT Protein and Associated NucleotideDomains with Inferred Trees

FAM  PF00897
PID  Orbi_VP7
DES  Orbivirus inner capsid protein VP7
IPR  IPR001803
ANO  5
ALN  352
AID  0.395424
APH  ((VP7_BRD/1-350:1.99089,(VP7_AHSV6/1-349:0.29851,Q9YN53_9REOV/1-348:0.41061):0.22679):0.21501,VP7_BTV2A/1-349:0.23387,VP7_EHDV1/1-349:0.24781);
ATP  ((VP7_BRD/1-350,(VP7_AHSV6/1-349,Q9YN53_9REOV/1-348)),VP7_BTV2A/1-349,VP7_EHDV1/1-349);
ATL  3.6235
DNO  4
DLN  1056
DID  0.546799
DPH  (VP7_AHSV6/1-349:37.26741,(VP7_EHDV1/1-349:29.32579,VP7_BTV2A/1-349:33.90954):40.42543,Q9YN53_9REOV/1-348:43.94137);
DTP  (VP7_AHSV6/1-349,(VP7_EHDV1/1-349,VP7_BTV2A/1-349),Q9YN53_9REOV/1-348);
DTL  180.918
RID  0.508324
RPH  ((VP7_EHDV1/1-349:0.25600,VP7_BTV2A/1-349:0.23128):0.44277,VP7_AHSV6/1-349:0.29994,Q9YN53_9REOV/1-348:0.41302);
RTP  ((VP7_EHDV1/1-349,VP7_BTV2A/1-349),VP7_AHSV6/1-349,Q9YN53_9REOV/1-348);
RTL  1.64302
LNK  Q9YN53_9REOV/1-348:Q9YN53:AB014727
LNK  VP7_AHSV6/1-349:O71027:AF021238
LNK  VP7_BRD/1-350:P35935:
LNK  VP7_BTV2A/1-349:P26561:M64997
LNK  VP7_EHDV1/1-349:Q00274:D10766
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9YN53_9REOV/1-348
ASQ  MDAIAARALSVIEACTTLVDSRVSMDPGVMELLGIALNRYNAMSLRGVTMRPTTQQERNDMFFMCVDMTIAALGIQIGNISQTYRPSMATIGALATSEIPYTTSAMTRVVRITGMLNTYTPSRMYLPPYIAARDMQAPGRYY-VPAGRSRSAVTS-SNTIETSIQQGTIVQMGGTLAPRRGDAMMMYFIWQPIRV-FSGANGVTQESGAGITVTVDGVEIAAGNIAVWDTVAPIVVTNPSNRDSMVRFEVLWYTTFDRTPTLVPETYEMMNRCYSYISPQWHALRATLCMRVGLPAMHPPIFAPGDRETLMALLLYSALADACDALKPDFDMIGVAG-VAPQNRAGVAQAYR
DSQ  ATGGATGCGATTGCGGCGCGCGCATTATCAGTTATTGAAGCATGTACAACTTTAGTGGATTCAAGGGTGAGCATGGACCCAGGAGTTATGGAGTTATTAGGTATCGCTCTAAATAGATATAATGCTATGTCATTAAGGGGTGTAACGATGCGGCCAACTACACAACAAGAAAGAAATGATATGTTCTTTATGTGCGTAGATATGACAATAGCTGCGTTAGGTATACAAATTGGAAATATATCTCAAACCTATAGACCATCAATGGCAACGATCGGTGCATTAGCAACAAGTGAAATTCCATATACAACGTCGGCAATGACAAGAGTTGTACGAATTACAGGTATGCTGAATACATATACACCAAGTAGGATGTACTTACCACCATATATAGCAGCGCGTGACATGCAAGCGCCAGGAAGATATTAT---GTACCTGCAGGACGGTCGAGATCCGCAGTAACATCA---AGCAATACGATTGAAACATCAATCCAGCAAGGAACAATAGTTCAGATGGGAGGAACCTTGGCCCCACGGCGGGGTGATGCAATGATGATGTATTTTATTTGGCAACCGATACGCGTG---TTCTCTGGGGCAAACGGCGTAACGCAAGAATCTGGTGCTGGGATCACAGTAACTGTTGATGGGGTGGAGATTGCTGCAGGGAATATCGCTGTCTGGGATACTGTTGCCCCAATTGTCGTGACAAATCCAAGTAATAGGGATTCAATGGTTAGGTTTGAAGTATTATGGTATACAACTTTTGATCGAACGCCAACACTTGTACCCGAAACATATGAAATGATGAATAGATGCTACTCATATATATCACCACAATGGCATGCATTGCGTGCGACCTTATGTATGAGGGTTGGATTGCCGGCTATGCACCCGCCTATTTTTGCACCCGGAGATCGTGAAACTCTGATGGCTTTATTGTTATATTCGGCACTAGCGGACGCATGTGACGCATTGAAGCCTGATTTTGATATGATTGGAGTTGCTGGG---GTTGCACCACAGAATAGAGCAGGCGTGGCGCAAGCGTACAGA
TRN  10010101100011000
NAM  VP7_AHSV6/1-349
ASQ  MDAIAARALSVVRACVTVTDARVSLDPGVMETLGIAINRYNGLTNHSVSMRPQTQAERNEMFFMCTDMVLAALNVQIGNISPDYDQALATVGALATTEIPYNVQAMNDIVRITGQMQTFGPSKVQTGPYAGAVEVQQSGRYY-VPQGRTRGGYIN-SNIAEVCMDAGAAGQVNALLAPRRGDAVMIYFVWRPLRI-FCDPQGASLESAPGTFVTVDGVNVAAGDVVAWNTIAPVNVGNPGARRSILQFEVLWYTSLDRSLDTVPELAPTLTRCYAYVSPTWHALRAVIFQQMNMQPINPPIFPPTERNEIVAYLLVASLADVYAALRPDFRMNGVVAPVGQINRALVLAAYH
DSQ  ATGGACGCGATAGCAGCAAGAGCCTTGTCCGTTGTACGGGCATGCGTCACAGTGACAGATGCGAGAGTTAGCTTGGATCCAGGAGTGATGGAGACGTTAGGGATTGCAATTAATAGGTACAATGGTTTAACGAATCATTCGGTATCGATGAGGCCACAAACCCAAGCAGAACGAAATGAAATGTTTTTTATGTGTACTGATATGGTTTTAGCGGCATTGAACGTCCAAATTGGGAATATTTCACCAGATTATGATCAGGCGTTGGCAACTGTGGGAGCTCTTGCAACGACTGAAATTCCATATAATGTTCAGGCCATGAATGACATCGTTAGAATAACGGGTCAAATGCAAACATTCGGACCAAGCAAAGTACAGACGGGACCTTATGCAGGAGCAGTTGAGGTGCAACAATCTGGCAGATATTAC---GTACCGCAAGGTCGAACACGTGGTGGGTACATTAAT---TCAAATATTGCTGAAGTGTGTATGGATGCAGGCGCTGCGGGACAGGTCAATGCGCTGCTAGCCCCAAGGAGGGGGGACGCAGTCATGATCTATTTTGTTTGGAGACCATTGCGTATA---TTTTGTGATCCTCAAGGTGCGTCACTTGAAAGCGCTCCAGGGACTTTTGTCACCGTTGATGGAGTAAATGTTGCGGCTGGAGATGTCGTCGCATGGAATACCATTGCACCAGTGAATGTTGGAAATCCTGGGGCACGCAGATCAATTTTACAGTTTGAAGTGTTATGGTATACGTCTTTGGATAGATCGCTAGACACGGTTCCGGAATTGGCTCCAACGCTCACAAGATGTTATGCGTATGTTTCTCCCACTTGGCACGCATTACGCGCTGTCATTTTTCAGCAGATGAATATGCAGCCTATTAATCCGCCAATTTTTCCACCGACTGAAAGGAATGAAATTGTTGCGTATCTATTAGTAGCTTCTTTAGCTGATGTGTATGCGGCTTTGAGGCCAGATTTCAGAATGAATGGTGTTGTTGCGCCAGTAGGCCAGATCAACAGAGCTCTTGTGCTAGCAGCCTACCAC
TRN  10010101100011000
NAM  VP7_EHDV1/1-349
ASQ  MDTIAARALTVIKACNTLKEVRIVVESNVLEILGIAVNRYNGLTLRSVTMRPTSQEQRNEMFYMCLDMILAAANLNVGNISPDYIQNLATIGVLATPEIPYTMESANEIARMSGETGTWGPDRQPFGYFLAAPEVTQHGRFR-QRVGQNVTTSIVSSTLAQVSMNAGARGDIQALFQ-NQNDPVMIYFVWRRIGT-FSNAAGNAQDTPQGVTLNVGGVNMRAGVIIAYDGQAPVNVNNPGLGQGMIEIEVIYYLSLDKTMTQYPSLQAHIFNVYSYKNPLWHGLRAAILNRTTLPNNIPPIYPPHDRENVLLIILLSALADAFSVLAPDFNLFGVVPIQGPINRAVAQNAYV
DSQ  ATGGACACGATTGCTGCGAGAGCTCTAACAGTGATCAAAGCTTGTAACACTCTAAAAGAGGTAAGAATTGTAGTGGAGTCCAATGTCTTGGAGATATTAGGGATAGCAGTTAATAGATATAACGGATTGACTCTAAGATCAGTTACGATGCGACCAACTTCGCAGGAACAACGGAATGAAATGTTCTATATGTGTCTAGATATGATATTAGCAGCAGCAAATCTAAATGTAGGAAATATTTCCCCTGATTACATACAAAATTTGGCAACGATCGGGGTGTTGGCGACGCCAGAAATACCATATACGATGGAATCCGCGAACGAAATTGCTCGAATGAGCGGGGAGACAGGAACCTGGGGGCCGGATCGTCAACCTTTCGGCTATTTTTTGGCAGCGCCAGAAGTTACCCAACATGGGCGGTTCAGA---CAGCGAGTTGGCCAGAATGTTACTACATCAATCGTATCCTCGACTTTAGCTCAGGTTTCAATGAATGCTGGGGCACGGGGTGATATCCAGGCGCTATTTCAA---AATCAAAATGATCCTGTAATGATTTACTTTGTGTGGAGACGAATTGGGACT---TTTTCGAATGCAGCGGGTAATGCACAAGATACACCTCAGGGCGTGACTCTGAACGTGGGGGGTGTAAACATGAGGGCTGGTGTGATAATAGCTTATGATGGGCAAGCGCCGGTTAATGTGAATAACCCAGGTCTAGGACAAGGTATGATCGAGATTGAAGTGATCTATTATTTGAGTTTAGACAAAACCATGACCCAGTATCCATCATTACAAGCACATATATTCAATGTTTACTCATATAAGAATCCTTTGTGGCATGGACTACGAGCTGCGATTCTTAACAGAACAACGCTACCAAACAATATACCGCCCATTTATCCGCCTCATGATCGCGAGAACGTTTTGTTGATAATATTGCTGTCAGCTTTAGCAGATGCCTTTAGCGTATTGGCGCCAGACTTTAACTTATTTGGTGTAGTACCTATACAAGGTCCGATTAACAGGGCTGTTGCACAAAACGCCTATGTG
TRN  10010101100011000
NAM  VP7_BTV2A/1-349
ASQ  MDTIAARALTVMRACATLQEARIVLEANVMEILGIAINRYNGLTLRGVTMRPTSLAQRNEMFFMCLDMMLSAAGINVGPISPDYTQHMATIGVLATPEIPFTTEAANEIARVTGETSTWGPARQPYGFFLETEETFQPGRWF-MRAAQAVAAVVCGPDMIQVSLNAGARGDVQQIFQ-GRNDPMMIYLVWRRIEN-FAMAQGNSQQTQAGVTVSVGGVDMRAGRIIAWDGQAALHVHNPTQQNAMVQIQVVFYISMDKTLNQYPALTAEIFNVYSFRDHTWHGLRTAILNRTTLPNMLPPIFPPNDRDSILTLLLLSTLADVYTVLRPEFAIHGVNPMPGPLTRAIARAAYV
DSQ  ATGGACACTATCGCTGCAAGAGCACTCACTGTGATGCGAGCATGTGCTACGCTTCAAGAAGCAAGAATTGTGTTGGAAGCTAATGTGATGGAAATACTGGGGATAGCTATCAACAGGTACAATGGACTAACTCTACGTGGGGTAACGATGCGCCCGACCTCGTTAGCGCAAAGAAATGAGATGTTTTTTATGTGTCTTGATATGATGTTGTCTGCTGCGGGAATAAATGTTGGACCGATATCGCCAGATTATACTCAACATATGGCTACAATTGGTGTACTAGCAACGCCGGAAATCCCTTTTACAACAGAAGCGGCGAATGAAATAGCACGCGTGACTGGGGAGACTTCGACATGGGGGCCGGCGCGTCAGCCTTATGGTTTTTTCCTTGAAACTGAGGAGACTTTCCAACCTGGAAGATGGTTC---ATGCGCGCCGCTCAAGCGGTAGCTGCAGTGGTGTGCGGTCCGGATATGATTCAGGTGTCACTAAATGCTGGAGCGAGAGGGGATGTACAACAGATATTTCAG---GGTCGTAATGATCCCATGATGATATATTTGGTATGGAGAAGAATCGAAAAC---TTTGCGATGGCGCAAGGTAATTCACAGCAAACTCAAGCAGGTGTGACCGTTAGCGTTGGTGGAGTTGACATGAGAGCGGGACGCATTATAGCGTGGGATGGACAGGCCGCATTGCATGTGCATAACCCTACACAACAGAATGCGATGGTGCAGATACAGGTTGTGTTCTATATATCTATGGATAAAACTTTAAACCAGTACCCAGCTTTGACTGCCGAAATTTTTAATGTTTACAGCTTCAGGGATCATACATGGCATGGATTAAGAACGGCAATATTAAACAGAACCACACTGCCTAACATGCTGCCACCAATCTTCCCACCAAATGATCGTGATAGTATCTTAACCCTTCTACTTTTATCTACACTCGCTGATGTTTACACTGTGTTAAGACCAGAGTTTGCGATTCACGGCGTAAATCCGATGCCAGGGCCGCTCACACGTGCTATTGCACGCGCCGCCTATGTG
TRN  10010101100011000
NAM  VP7_BRD/1-350
ASQ  MDAYTARALSVLEGLAISGDPRSHRDPTTEATMSIFAMRFNSTTSRPVMGRPQ-RGKRGVITSTPQRCGIRDLEHHVAFVMPGYIQNPQTLAILARDEIPYTPSTFRRVQRYVSARMIIQMCERNDMLTPHYEAVTSPGVVLPAPAGGGPRCYAISATTLQIHIDPMQNEVLTPLIFPDQEDVIMAEFIWQRLANGIDNNAVMNMGTNVELLRDNAAVEGGTPFMATPRGIHVVLASYEPVNLCTIHLTCTRYWVTGPPRVVYDSMEADILAVYTYRDGFWDALRSYVLQALGMPAHHYPTRPVTEFRQNLAIAILSRLFDVYSQWR-LRSTLQLRPKVLWWLAHRLQAALR
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