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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF00894 - Luteo_coat)
FAM  PF00894
PID  Luteo_coat
DES  Luteovirus coat protein
IPR  IPR001517
ANO  13
ALN  140
AID  0.555899
APH  (((((((((Q65868_9LUTE/34-170:0.12054,Q65869_9LUTE/35-172:0.11238):0.13936,Q65880_9LUTE/60-197:0.08307):0.18599,(COAT_BWYVF/65-202:0.15337,Q65970_9LUTE/62-199:0.08974):0.05056):0.04013,(COAT_BLRV/59-196:0.15972,Q08391_9LUTE/63-200:0.13720):0.16618):0.04845,COAT_BYDVN/67-204:0.16036):0.01473,COAT_PLRV/70-208:0.18006):0.21324,COAT_PEAMV/51-187:1.03850):0.18446,Q65845_9LUTE/58-196:0.30933):0.10649,COAT_BYDV1/61-199:0.13310,COAT_BYDVP/62-200:0.14029);
ATP  (((((((((Q65868_9LUTE/34-170,Q65869_9LUTE/35-172),Q65880_9LUTE/60-197),(COAT_BWYVF/65-202,Q65970_9LUTE/62-199)),(COAT_BLRV/59-196,Q08391_9LUTE/63-200)),COAT_BYDVN/67-204),COAT_PLRV/70-208),COAT_PEAMV/51-187),Q65845_9LUTE/58-196),COAT_BYDV1/61-199,COAT_BYDVP/62-200);
ATL  3.97697
DNO  12
DLN  420
DID  0.58829
DPH  (((((COAT_BLRV/59-196:0.15876,Q08391_9LUTE/63-200:0.15049):0.08140,(((Q65869_9LUTE/35-172:0.19671,Q65880_9LUTE/60-197:0.07865):0.16894,(COAT_BWYVF/65-202:0.20697,Q65970_9LUTE/62-199:0.12405):0.04102):0.04173,(COAT_PLRV/70-208:0.14716,COAT_BYDVN/67-204:0.20049):0.06908):0.03959):0.15931,COAT_PEAMV/51-187:0.72091):0.25574,COAT_BYDVP/62-200:0.05129):0.09675,COAT_BYDV1/61-199:0.13559,Q65845_9LUTE/58-196:0.29252);
DTP  (((((COAT_BLRV/59-196,Q08391_9LUTE/63-200),(((Q65869_9LUTE/35-172,Q65880_9LUTE/60-197),(COAT_BWYVF/65-202,Q65970_9LUTE/62-199)),(COAT_PLRV/70-208,COAT_BYDVN/67-204))),COAT_PEAMV/51-187),COAT_BYDVP/62-200),COAT_BYDV1/61-199,Q65845_9LUTE/58-196);
DTL  3.41714
RID  0.551895
RPH  ((((((((Q65869_9LUTE/35-172:0.21463,Q65880_9LUTE/60-197:0.09093):0.18021,(COAT_BWYVF/65-202:0.15473,Q65970_9LUTE/62-199:0.08673):0.05036):0.04655,(COAT_BLRV/59-196:0.16034,Q08391_9LUTE/63-200:0.13664):0.16338):0.04647,COAT_BYDVN/67-204:0.16404):0.01332,COAT_PLRV/70-208:0.17819):0.21286,COAT_PEAMV/51-187:1.04002):0.18510,Q65845_9LUTE/58-196:0.30962):0.10653,COAT_BYDV1/61-199:0.13340,COAT_BYDVP/62-200:0.14032);
RTP  ((((((((Q65869_9LUTE/35-172,Q65880_9LUTE/60-197),(COAT_BWYVF/65-202,Q65970_9LUTE/62-199)),(COAT_BLRV/59-196,Q08391_9LUTE/63-200)),COAT_BYDVN/67-204),COAT_PLRV/70-208),COAT_PEAMV/51-187),Q65845_9LUTE/58-196),COAT_BYDV1/61-199,COAT_BYDVP/62-200);
RTL  3.80798
LNK  COAT_BLRV/59-196:P19126:X53865
LNK  COAT_BWYVF/65-202:P09508:X13063
LNK  COAT_BYDV1/61-199:Q00010:X17260
LNK  COAT_BYDVN/67-204:P27578:D10206
LNK  COAT_BYDVP/62-200:P09510:X07653
LNK  COAT_PEAMV/51-187:P29153:L04573
LNK  COAT_PLRV/70-208:P10470:X13906
LNK  Q08391_9LUTE/63-200:Q08391:L20835
LNK  Q65845_9LUTE/58-196:Q65845:U06865
LNK  Q65868_9LUTE/34-170:Q65868:
LNK  Q65869_9LUTE/35-172:Q65869:L12758
LNK  Q65880_9LUTE/60-197:Q65880:Z14123
LNK  Q65970_9LUTE/62-199:Q65970:X76931
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q65970_9LUTE/62-199
ASQ  ETFVFSKDNLTGSSTGSITFGPSLSESPAFSSGILKAYHEYKIIMVQLEFISEASSTSSGSISYELDP.HCKLSSLQSTINKFGITKSGLRRWTAKQINGMEWHDATEDQFKILYKGNGSSS-VAGSFRITIKCQVQNPK
DSQ  GAAACATTTGTATTTTCAAAGGACAATCTCACGGGCAGTTCCACAGGAAGTATCACCTTCGGGCCGTCTCTTTCAGAGAGCCCAGCATTCAGCTCTGGAATACTCAAGGCCTACCATGAATATAAGATCATCATGGTCCAGCTGGAGTTCATCTCCGAGGCCTCTTCCACCTCCTCGGGTTCCATCTCTTATGAGTTGGACCCC...CACTGCAAGCTTAGCTCCCTCCAATCCACGATTAATAAATTTGGAATCACCAAGAGTGGATTGCGACGTTGGACCGCTAAGCAGATCAACGGGATGGAATGGCATGATGCAACCGAAGACCAGTTCAAGATCCTCTATAAAGGGAATGGATCTTCCTCG---GTTGCGGGCAGCTTCAGAATCACCATCAAGTGCCAGGTCCAGAACCCGAAA
TRN  10010101100011001
NAM  COAT_BWYVF/65-202
ASQ  ETFVFSKDNLAGSSSGAITFGPSLSDCPAFSNGMLKAYHEYKISMVILEFVSEASSQNSGSIAYELDP.HCKLNSLSSTINKFGITKPGKRAFTASYINGTEWHDVAEDQFRILYKGNGSSS-IAGSFRITIKCQFHNPK
DSQ  GAGACATTTGTTTTCTCAAAAGACAATCTCGCGGGAAGTTCCAGCGGAGCAATCACGTTCGGGCCGAGTCTATCAGACTGCCCGGCATTCTCTAATGGAATGCTCAAGGCCTACCATGAGTATAAAATCTCAATGGTCATTTTGGAGTTCGTCTCCGAAGCCTCTTCCCAAAATTCCGGTTCCATCGCTTACGAGCTGGACCCA...CACTGTAAACTCAACTCCCTTTCCTCAACTATCAACAAGTTCGGGATCACAAAGCCCGGGAAAAGGGCGTTTACAGCGTCTTACATCAACGGAACGGAATGGCACGACGTTGCCGAGGACCAATTCAGGATCCTCTACAAAGGCAATGGTTCTTCATCG---ATAGCTGGTTCTTTCAGAATCACCATTAAGTGTCAATTCCACAACCCCAAA
TRN  10010101100011001
NAM  COAT_BYDVN/67-204
ASQ  ETFVFSKDSLAGNSSGSITFGPSLSEYPAFQNGVLKAYHEYKITNCVLQFVSEASSTAAGSISYELDP.HCKASSLASTINKFTITKTGARSFPAKMINGLEWHPSDEDQFRILYKGNGASS-VAGSFKITLRVQLQNPK
DSQ  GAGACATTCGTTTTCTCAAAGGATTCACTCGCGGGCAACTCCTCTGGAAGTATCACCTTCGGGCCGTCTCTATCAGAGTATCCGGCATTCCAGAATGGAGTACTCAAGGCCTACCATGAATATAAGATCACAAATTGTGTCTTACAGTTCGTCAGCGAGGCCTCTTCCACAGCAGCCGGCTCCATCTCTTACGAGTTGGACCCC...CATTGCAAAGCATCTTCACTCGCATCAACAATCAATAAGTTCACAATCACCAAAACTGGTGCGCGGAGCTTCCCAGCGAAGATGATCAACGGGTTAGAGTGGCACCCCTCAGATGAGGATCAGTTCCGAATTCTTTACAAAGGGAACGGTGCTTCTTCT---GTGGCTGGGTCTTTTAAGATCACTCTTAGAGTCCAGCTACAAAACCCAAAA
TRN  10010101110011000
NAM  COAT_PLRV/70-208
ASQ  ETFVFTKDNLMGNSQGSFTFGPSLSDCPAFKDGILKAYHEYKITSILLQFVSEASSTSSGSIAYELDP.HCKVSSLQSYVNKFQITKGGAKTYQARMINGVEWHDSSEDQCRILWKGNGKSSDTAGSFRVTIRVALQNPK
DSQ  GAGACATTCGTGTTTACAAAGGACAACCTCATGGGCAACTCCCAAGGAAGTTTCACCTTCGGGCCGAGTCTATCAGACTGTCCGGCTTTCAAGGATGGAATACTCAAGGCCTACCATGAGTATAAGATCACAAGCATCTTACTTCAGTTCGTCAGCGAGGCCTCTTCCACCTCCTCCGGCTCCATCGCTTATGAGTTGGACCCC...CATTGCAAAGTATCATCCCTCCAGTCCTACGTCAACAAGTTCCAAATTACGAAGGGCGGCGCCAAAACTTATCAAGCGCGGATGATAAACGGGGTAGAATGGCACGATTCTTCTGAGGATCAGTGCCGGATACTGTGGAAGGGAAATGGAAAATCTTCAGATACCGCAGGATCCTTCAGAGTCACCATCAGGGTGGCTTTGCAAAACCCCAAA
TRN  10010101100011000
NAM  Q08391_9LUTE/63-200
ASQ  HTFVFSKDGINGSSKGSITFGPSLSECKPFSDGILKAYHEYKITSVLLQFITEASSTSSGSIAYELDP.HCKYSEIQSLLNKFSITKSGSKRFPTRAINGLEWHDTSEDQFKIHYKGNGESK-IAGSFKITINVLTQNAK
DSQ  CACACATTCGTGTTTTCAAAGGACGGCATCAATGGTAGTTCCAAGGGAAGTATCACTTTCGGGCCGTCTTTATCAGAATGCAAGCCATTCTCTGATGGAATACTCAAGGCCTACCATGAATATAAGATCACGAGTGTCTTATTACAGTTCATCACCGAGGCCTCTTCCACCTCGTCAGGTTCCATCGCTTATGAACTTGACCCA...CACTGCAAGTACTCCGAAATTCAATCGCTACTCAATAAATTCAGTATCACAAAGAGCGGTTCGAAACGTTTCCCAACCAGAGCTATCAATGGCCTCGAATGGCATGATACCAGTGAAGATCAATTCAAGATCCACTATAAAGGGAACGGAGAGTCCAAG---ATTGCAGGCTCCTTCAAGATCACGATCAATGTCCTAACGCAGAATGCTAAA
TRN  10010101110011000
NAM  COAT_BLRV/59-196
ASQ  HEFVFSKDNLNGNSKGSITFGPSLSECKPLADGILKAYHEYNITNVELAYITEASSTSSGSIAYELDP.HLKNTTIQSKINKFSITKSEKKKFSRKAINGQAWHDTSEDQFRILYEGNGDAK-IAGSFRVTIKVLTQNPK
DSQ  CACGAATTCGTATTCTCTAAGGACAACCTCAATGGAAACTCCAAGGGAAGTATCACGTTCGGGCCGTCTCTATCAGAGTGCAAGCCGCTCGCAGATGGCATACTCAAGGCCTACCATGAGTATAATATCACGAACGTCGAGCTGGCGTACATCACCGAGGCCTCTTCCACCTCCTCAGGTTCCATCGCTTATGAACTCGATCCT...CACCTCAAGAACACAACAATCCAGTCCAAAATTAACAAATTCAGCATCACCAAATCTGAGAAGAAAAAGTTCTCTCGGAAGGCTATCAATGGACAGGCATGGCACGACACTTCAGAGGACCAATTCAGGATTCTCTACGAAGGAAACGGAGATGCCAAG---ATTGCTGGATCGTTCAGAGTCACTATCAAGGTATTAACTCAGAATCCAAAA
TRN  10010101100011000
NAM  Q65880_9LUTE/60-197
ASQ  ETFVFSKDSIAGNASGKITFGPSLSECAAFSGGILKAYHEYKISKIILEFISEAASTAEGSIAYELDS.HNKLSTLGSTINKFSIVKGGRKAFTSNQIGGGVWRDSTEDQCAILYKGNGKSS-VAGSFRITIEVIVQNPK
DSQ  GAGACTTTTGTATTTTCAAAGGACTCTATCGCGGGCAACGCCTCCGGGAAAATCACCTTCGGACCGTCTTTATCAGAGTGTGCAGCATTCAGTGGCGGAATTCTCAAGGCCTACCATGAGTATAAGATCTCAAAGATCATACTGGAGTTCATCTCCGAGGCCGCTTCCACCGCCGAAGGTTCCATCGCTTATGAACTTGATTCA...CACAACAAGCTCTCAACCCTTGGCTCCACCATCAACAAATTCTCAATCGTCAAAGGTGGCAGAAAGGCATTTACGTCCAATCAAATCGGAGGTGGAGTTTGGCGCGACTCAACAGAAGACCAGTGCGCCATTCTCTACAAAGGTAACGGAAAGTCCTCG---GTCGCGGGTTCGTTCAGAATCACGATTGAGGTCATTGTTCAAAACCCCAAA
TRN  10010101100011000
NAM  Q65869_9LUTE/35-172
ASQ  ETFVFSKDSLTGNAPGSSPSGRLYQSAHAFSSGILKAYHEYKISKVTLEFISEASSQSEGSIAYELDP.HNKLSALSSTINEFSIVKGGKKTLSSNQIGGGVWRDSTEDQFAILYKGNGKSS-IAGSFRVTMDVLTQNPK
DSQ  GAAACATTTGTGTTTTCGAAGGACTCTCTCACGGGCAATGCTCCGGGAAGCTCACCTTCGGGGCGTCTCTATCAGAGTGCGCACGCATTCAGTAGTGGAATTCTCAAGGCCTACCATGAATATAAGATCTCAAAGGTCACTTTGGAGTTCATCTCGGAGGCCTCTTCCCAATCTGAAGGCTCCATCGCTTATGAGCTTGACCCA...CACAACAAGCTCTCAGCTCTCTCTTCCACCATCAACGAGTTTTCAATCGTCAAAGGTGGTAAGAAGACCTTATCGTCCAATCAAATCGGAGGTGGAGTTTGGCGAGACTCAACAGAAGATCAATTCGCCATCCTCTACAAGGGTAATGGAAAATCCTCG---ATCGCGGGCTCGTTCCGCGTTACGATGGATGTTCTAACCCAAAACCCCAAA
TRN  11011101111011000
NAM  Q65868_9LUTE/34-170
ASQ  ETFVFSKDSIAGSAPESSPSGRLFLSAPAFSGGILKAYHEYKITKIILEFISEASSTQSGSIAYELDP.HNKLSTLASTINQISIVKGGKRSISSKQIGGGVWRDSSEDQFAILYKGSGNSS-VAGSFRITM-VHTQNPK
NAM  Q65845_9LUTE/58-196
ASQ  EVFTFSVNDIKGNSNGVIKFGPSLSQCPALSDGILKSYHDYAITNVQIFYRSHASSETEGALFIELDN.SCTQSALASYINSFTITSSGSKTFTAGSINGTTMKNYLSDQFYLLYKGNSSKATVAGQFIITIRVKMANPK
DSQ  GAGGTATTCACTTTTTCAGTCAACGACATCAAAGGCAACTCCAACGGGGTCATCAAATTCGGCCCCAGCCTTTCGCAATGTCCTGCATTATCAGACGGAATACTTAAGTCCTACCACGACTACGCGATCACAAATGTCCAGATATTCTATAGATCGCACGCCAGCTCCGAAACTGAGGGCGCACTCTTTATTGAACTCGACAAC...TCGTGCACACAATCAGCCTTGGCTAGCTACATTAACTCATTCACCATCACAAGTTCCGGATCGAAGACCTTCACGGCGGGCTCTATTAACGGGACCACGATGAAGAACTATTTGTCTGACCAGTTTTACCTCTTATACAAAGGCAACAGTTCTAAGGCCACTGTTGCAGGTCAGTTTATTATCACGATCCGCGTTAAAATGGCCAACCCTAAA
TRN  10010101110011000
NAM  COAT_BYDVP/62-200
ASQ  EVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKITSIRVEFKSHASANTAGAIFIELDT.ACKQSALGSYINSFTISKTASKTFRSEAINGKEFQESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK
DSQ  GAGGTATTCGTATTCTCAGTTGACAACCTTAAAGCCAACTCCTCCGGGGCAATCAAATTCGGCCCCAGTCTATCGCAATGCCCAGCGCTTTCAGACGGAATACTCAAGTCCTACCATCGTTACAAGATCACAAGTATCCGAGTTGAGTTTAAGTCACACGCGTCCGCCAATACGGCAGGCGCTATCTTTATTGAGCTCGACACC...GCGTGCAAGCAATCAGCCCTGGGTAGCTACATTAATTCCTTCACCATCAGCAAGACCGCCTCCAAGACCTTCCGGTCAGAGGCAATTAATGGGAAGGAATTCCAGGAATCAACGATAGACCAATTTTGGATGCTCTACAAGGCCAATGGAACTACCACTGACACGGCAGGACAATTTATCATTACGATGAGTGTCAGTTTGATGACGGCCAAA
TRN  10010101100011001
NAM  COAT_BYDV1/61-199
ASQ  EVFVFSVNDLKANSSGTIKFGPDLSQCPALSGGILKSYHLYKITNVKVEFKSHASASTVGAMFIELDT.WCSQSTLGSYINSFTISKSATKTFTAQQIDGKEFRESTVNQFYMLYKANGSTSDTAGQFIITIRVANMTPK
DSQ  GAGGTATTCGTATTCTCAGTCAACGACCTTAAGGCCAACTCCTCAGGGACAATCAAGTTCGGTCCCGACCTTTCGCAATGCCCAGCGCTTTCAGGTGGAATACTCAAGTCCTACCACCTTTACAAGATCACAAACGTCAAGGTTGAGTTTAAGTCACACGCGTCCGCCTCTACAGTCGGCGCAATGTTTATTGAACTCGACACT...TGGTGCTCACAATCAACCTTGGGTAGCTACATTAACTCATTCACCATCTCAAAATCAGCAACCAAAACCTTCACCGCCCAACAGATTGACGGGAAGGAATTCAGGGAGAGTACGGTGAACCAATTTTACATGCTATACAAGGCGAATGGTAGTACATCTGATACCGCCGGGCAATTCATCATTACAATACGCGTTGCCAACATGACTCCCAAA
TRN  10010101110011001
NAM  COAT_PEAMV/51-187
ASQ  VDFSMVHGPFNGNATGTVKFGPSS-DCQCIK-GNLAAYQKYRIVWLKVVYQSEAAATDRGCIAYHVDTsTTKKAADVVLLDTWNIRSNGSATFGREILGDQPWYESNKDQFFFLYRGTGGTD-VAGHYRISGRIQLMNAS
DSQ  GTGGATTTCTCCATGGTGCATGGGCCATTTAATGGCAATGCCACTGGCACAGTTAAATTCGGACCCTCCTCC---GACTGCCAGTGTATAAAG---GGAAACCTAGCCGCTTACCAAAAGTATAGGATCGTATGGTTAAAGGTTGTTTATCAATCTGAGGCCGCAGCCACTGATCGTGGTTGCATAGCCTACCATGTGGACACCtccACAACTAAGAAGGCCGCCGATGTAGTGTTGCTTGACACTTGGAACATTCGTTCTAATGGGTCCGCCACTTTCGGTCGTGAAATTCTTGGTGATCAACCGTGGTACGAGTCCAATAAGGATCAGTTCTTTTTCCTATATCGCGGCACGGGCGGTACCGAC---GTGGCTGGACACTACCGGATTTCTGGTAGGATTCAGCTAATGAATGCCTCC
TRN  10010101110011010
//