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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF00877 - NLPC_P60)
FAM  PF00877
PID  NLPC_P60
DES  NlpC/P60 family
IPR  IPR000064
ANO  31
ALN  171
AID  0.320544
APH  (P74160_SYNY3/112-245:0.58641,((DPP6_BACSH/163-263:0.90181,Q51835_PORGI/68-178:0.97999):0.20746,(((((NLPC_ECOLI/47-153:0.28723,Y1314_HAEIN/54-160:0.32278):0.26022,SPR_ECOLI/79-183:0.20888):0.09068,NLPC_HAEIN/80-181:0.23126):0.30013,((((Q45906_COXBU/3-116:0.50501,Q9RIE1_YERPE/136-252:0.69078):0.04590,((Q9I5S7_PSEAE/119-250:0.42828,Q9MCU3_BPHK0/116-231:0.64514):0.05402,Q9FZU5_9VIRU/118-229:0.98272):0.22002):1.02069,YVCE_BACSU/355-469:0.45703):0.32578,((((P60_LISIN/364-466:0.05326,P60_LISGR/408-510:0.29516):0.36435,(Q47734_ENTFA/224-330:0.34507,YDDH_BACSU/221-327:0.27263):0.16584):0.16235,(P71594_MYCTU/182-281:0.67275,(((O07391_MYCAV/127-243:0.27467,O07390_MYCAV/156-272:0.18810):0.08109,O06624_MYCTU/55-168:0.32703):0.35927,(P94618_CLOBE/412-511:0.40889,P54_ENTFC/414-516:0.60669):0.10412):0.13319):0.20550):0.12051,(PGDS_BACSU/178-285:0.50906,((YOJL_BACSU/311-412:0.16994,LYTF_BACSU/385-486:0.11519):0.01093,LYTE_BACSU/232-333:0.21280):0.44953):0.03329):0.11554):0.02225):0.07303,(O35010_BACSU/185-292:0.82330,(YDHO_ECOLI/153-263:0.16583,YAFL_ECOLI/131-241:0.46198):0.18238):0.16864):0.24136):0.36795,O24914_HELPY/301-437:1.01239);
ATP  (P74160_SYNY3/112-245,((DPP6_BACSH/163-263,Q51835_PORGI/68-178),(((((NLPC_ECOLI/47-153,Y1314_HAEIN/54-160),SPR_ECOLI/79-183),NLPC_HAEIN/80-181),((((Q45906_COXBU/3-116,Q9RIE1_YERPE/136-252),((Q9I5S7_PSEAE/119-250,Q9MCU3_BPHK0/116-231),Q9FZU5_9VIRU/118-229)),YVCE_BACSU/355-469),((((P60_LISIN/364-466,P60_LISGR/408-510),(Q47734_ENTFA/224-330,YDDH_BACSU/221-327)),(P71594_MYCTU/182-281,(((O07391_MYCAV/127-243,O07390_MYCAV/156-272),O06624_MYCTU/55-168),(P94618_CLOBE/412-511,P54_ENTFC/414-516)))),(PGDS_BACSU/178-285,((YOJL_BACSU/311-412,LYTF_BACSU/385-486),LYTE_BACSU/232-333))))),(O35010_BACSU/185-292,(YDHO_ECOLI/153-263,YAFL_ECOLI/131-241)))),O24914_HELPY/301-437);
ATL  20.0281
DNO  30
DLN  513
DID  0.415853
DPH  (((((((((YAFL_ECOLI/131-241:0.38225,YDHO_ECOLI/153-263:0.19203):0.20558,(DPP6_BACSH/163-263:0.58799,O35010_BACSU/185-292:0.43871):0.09143):0.09845,((SPR_ECOLI/79-183:0.31231,(NLPC_HAEIN/80-181:0.31209,(Y1314_HAEIN/54-160:0.27174,NLPC_ECOLI/47-153:0.33195):0.16512):0.06807):0.07818,Q51835_PORGI/68-178:0.81753):0.10341):0.08942,(P94618_CLOBE/412-511:0.47333,(((O07391_MYCAV/127-243:0.17784,O07390_MYCAV/156-272:0.14843):0.09813,O06624_MYCTU/55-168:0.18918):0.15789,P71594_MYCTU/182-281:0.43647):0.29010):0.12756):0.04059,((((LYTE_BACSU/232-333:0.22702,(LYTF_BACSU/385-486:0.17471,YOJL_BACSU/311-412:0.19570):0.04650):0.35032,PGDS_BACSU/178-285:0.37940):0.05136,YVCE_BACSU/355-469:0.61143):0.10776,((YDDH_BACSU/221-327:0.28834,(P60_LISGR/408-510:0.25211,P60_LISIN/364-466:0.09133):0.26283):0.08018,Q47734_ENTFA/224-330:0.39402):0.11399):0.06113):0.20274,(P74160_SYNY3/112-245:0.45259,O24914_HELPY/301-437:0.63086):0.16167):0.45912,Q45906_COXBU/3-116:0.25694):0.25764,Q9RIE1_YERPE/136-252:0.46898):0.09963,Q9MCU3_BPHK0/116-231:0.35286,(Q9FZU5_9VIRU/118-229:0.59331,Q9I5S7_PSEAE/119-250:0.34645):0.13734);
DTP  (((((((((YAFL_ECOLI/131-241,YDHO_ECOLI/153-263),(DPP6_BACSH/163-263,O35010_BACSU/185-292)),((SPR_ECOLI/79-183,(NLPC_HAEIN/80-181,(Y1314_HAEIN/54-160,NLPC_ECOLI/47-153))),Q51835_PORGI/68-178)),(P94618_CLOBE/412-511,(((O07391_MYCAV/127-243,O07390_MYCAV/156-272),O06624_MYCTU/55-168),P71594_MYCTU/182-281))),((((LYTE_BACSU/232-333,(LYTF_BACSU/385-486,YOJL_BACSU/311-412)),PGDS_BACSU/178-285),YVCE_BACSU/355-469),((YDDH_BACSU/221-327,(P60_LISGR/408-510,P60_LISIN/364-466)),Q47734_ENTFA/224-330))),(P74160_SYNY3/112-245,O24914_HELPY/301-437)),Q45906_COXBU/3-116),Q9RIE1_YERPE/136-252),Q9MCU3_BPHK0/116-231,(Q9FZU5_9VIRU/118-229,Q9I5S7_PSEAE/119-250));
DTL  14.8114
RID  0.31987
RPH  ((((((((((SPR_ECOLI/79-183:0.19791,(Y1314_HAEIN/54-160:0.31497,NLPC_ECOLI/47-153:0.29768):0.26389):0.09177,NLPC_HAEIN/80-181:0.24499):0.26550,YVCE_BACSU/355-469:0.71317):0.05730,((Q51835_PORGI/68-178:1.01177,DPP6_BACSH/163-263:0.89446):0.22618,(P74160_SYNY3/112-245:0.59758,O24914_HELPY/301-437:1.00333):0.37078):0.25392):0.00000,(LYTE_BACSU/232-333:0.20311,(LYTF_BACSU/385-486:0.11432,YOJL_BACSU/311-412:0.16932):0.02515):0.50584):0.09375,PGDS_BACSU/178-285:0.50566):0.08302,(((P94618_CLOBE/412-511:0.49013,(O06624_MYCTU/55-168:0.32050,(O07390_MYCAV/156-272:0.18516,O07391_MYCAV/127-243:0.27590):0.10032):0.35874):0.18186,P71594_MYCTU/182-281:0.62759):0.17237,(((YAFL_ECOLI/131-241:0.39210,YDHO_ECOLI/153-263:0.24089):0.23654,O35010_BACSU/185-292:0.75603):0.10196,((YDDH_BACSU/221-327:0.24043,(P60_LISGR/408-510:0.31004,P60_LISIN/364-466:0.03821):0.46427):0.16809,Q47734_ENTFA/224-330:0.26236):0.24267):0.05144):0.04010):1.16599,Q9FZU5_9VIRU/118-229:0.86206):0.09603,Q9MCU3_BPHK0/116-231:0.56418):0.16717,(Q45906_COXBU/3-116:0.50750,Q9RIE1_YERPE/136-252:0.69801):0.18159,Q9I5S7_PSEAE/119-250:0.45614);
RTP  ((((((((((SPR_ECOLI/79-183,(Y1314_HAEIN/54-160,NLPC_ECOLI/47-153)),NLPC_HAEIN/80-181),YVCE_BACSU/355-469),((Q51835_PORGI/68-178,DPP6_BACSH/163-263),(P74160_SYNY3/112-245,O24914_HELPY/301-437))),(LYTE_BACSU/232-333,(LYTF_BACSU/385-486,YOJL_BACSU/311-412))),PGDS_BACSU/178-285),(((P94618_CLOBE/412-511,(O06624_MYCTU/55-168,(O07390_MYCAV/156-272,O07391_MYCAV/127-243))),P71594_MYCTU/182-281),(((YAFL_ECOLI/131-241,YDHO_ECOLI/153-263),O35010_BACSU/185-292),((YDDH_BACSU/221-327,(P60_LISGR/408-510,P60_LISIN/364-466)),Q47734_ENTFA/224-330)))),Q9FZU5_9VIRU/118-229),Q9MCU3_BPHK0/116-231),(Q45906_COXBU/3-116,Q9RIE1_YERPE/136-252),Q9I5S7_PSEAE/119-250);
RTL  19.4397
LNK  DPP6_BACSH/163-263:P39043:X83680
LNK  LYTE_BACSU/232-333:P54421:U38819
LNK  LYTF_BACSU/385-486:O07532:Y14079
LNK  NLPC_ECOLI/47-153:P23898:M14031
LNK  NLPC_HAEIN/80-181:P45296:U32838
LNK  O06624_MYCTU/55-168:O06624:BX842577
LNK  O07390_MYCAV/156-272:O07390:AF002133
LNK  O07391_MYCAV/127-243:O07391:AF002133
LNK  O24914_HELPY/301-437:O24914:AE000530
LNK  O35010_BACSU/185-292:O35010:AJ002571
LNK  P54_ENTFC/414-516:P13692:
LNK  P60_LISGR/408-510:Q01835:M80352
LNK  P60_LISIN/364-466:Q01836:M80349
LNK  P71594_MYCTU/182-281:P71594:BX842572
LNK  P74160_SYNY3/112-245:P74160:BA000022
LNK  P94618_CLOBE/412-511:P94618:U77909
LNK  PGDS_BACSU/178-285:P96740:AB085821
LNK  Q45906_COXBU/3-116:Q45906:X93204
LNK  Q47734_ENTFA/224-330:Q47734:U09422
LNK  Q51835_PORGI/68-178:Q51835:X95938
LNK  Q9FZU5_9VIRU/118-229:Q9FZU5:AJ278707
LNK  Q9I5S7_PSEAE/119-250:Q9I5S7:AE004499
LNK  Q9MCU3_BPHK0/116-231:Q9MCU3:AF069308
LNK  Q9RIE1_YERPE/136-252:Q9RIE1:AL117211
LNK  SPR_ECOLI/79-183:P77685:D86610
LNK  Y1314_HAEIN/54-160:Q57223:U32810
LNK  YAFL_ECOLI/131-241:Q47151:D38582
LNK  YDDH_BACSU/221-327:P96645:AB001488
LNK  YDHO_ECOLI/153-263:P76190:U00096
LNK  YOJL_BACSU/311-412:O31852:AF026147
LNK  YVCE_BACSU/355-469:P40767:Z94043
AMK  xx.xxxxxxxxxxxx........xx.xxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxx.x.xxx.xxxxxxxxxxxxxxxxxxx
DMK  xxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................xxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxx...xxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  O24914_HELPY/301-437
ASQ  GQ.KYGWGGLLG---........--.NRDCSAFTRDSFANF-GILLPRNSYAQ..--SRYAN..NYVDLSSMKAKEKEDYILKNATPFGTLIYLKG.--------HIMLYLGAHNhqaivahsiwsvQTQKHFKTL--SHKIGGVvItSLW.LAEEHNGAFSKKKLLIDRV
DSQ  GGGCAA...AAATACGGCTGGGGCGGGCTATTGGGT---------........................------...AATAGGGATTGCTCGGCTTTCACCAGAGATAGTTTTGCTAATTTT---GGTATTTTGCTCCCCAGAAATTCCTATGCGCAA......------AGCCGTTATGCGAAC......AATTATGTGGATTTAAGCTCTATGAAAGCCAAAGAAAAAGAAGACTACATCCTTAAAAACGCCACGCCTTTTGGAACGCTCATCTATTTAAAAGGG...------------------------CATATCATGCTTTATTTAGGCGCACACAACcatcaagcgatagtcgctcacagcatttggtcggtgCAAACCCAAAAGCATTTTAAAACCTTG------AGCCATAAAATAGGAGGCGTGgtgATCactTCGTTATGG...TTAGCTGAAGAGCATAATGGGGCGTTTTCTAAAAAGAAATTATTGATTGATAGGGTG
TRN  10010101110011010
NAM  P74160_SYNY3/112-245
ASQ  REnYYLWGGNIGP--........--.NYDCSGLMQAAFASQ-GIWLPRDSYQQaaFCQQVVD..VRPQRRSGELNQVMVEAIAKEFLPGDLIFFGN.----QRVDHVGMYL----............GEGKYIHSSGKTHGRNGIgIdSLTdLTDPISHKYFQKWWFCGRV
DSQ  AGGGAAaatTACTATCTTTGGGGAGGTAATATCGGCCCC------........................------...AACTACGACTGTTCCGGTTTAATGCAAGCCGCTTTTGCTAGTCAA---GGTATTTGGCTACCCAGGGATTCCTATCAACAGgccgccTTTTGTCAGCAAGTAGTTGAT......GTGAGGCCCCAACGGCGATCGGGAGAATTAAACCAAGTAATGGTGGAGGCGATCGCCAAGGAATTTTTACCGGGGGATTTAATTTTTTTTGGCAAT...------------CAACGGGTGGATCATGTGGGAATGTATCTG------------....................................GGGGAAGGAAAATATATCCACAGTTCTGGCAAAACCCATGGCCGCAACGGTATTggcATCgatTCCCTCACCgatTTAACGGATCCCATTAGCCATAAATATTTTCAAAAATGGTGGTTCTGTGGCCGGGTT
TRN  10010101100011010
NAM  DPP6_BACSH/163-263
ASQ  AT.PYRWGGKSPL--........--.GIDCSGLCSMAYLLN-GVIIFRDARIV..-------..---------EGFPIKEITIDRMQKGDLLFFPG.--------HVALYL----............GQTLYVHASLGGNEVN--.-.---.-VNSLDEQHPLYRQDLATT
DSQ  GCCACA...CCGTATCGTTGGGGAGGTAAGTCACCGCTA------........................------...GGCATTGATTGTTCGGGCTTATGTTCGATGGCTTATCTGCTAAAT---GGCGTAATTATTTTCCGAGATGCTAGAATAGTA......---------------------......---------------------------GAAGGTTTTCCAATTAAGGAGATAACAATTGATCGTATGCAAAAAGGAGATTTGCTATTTTTCCCAGGG...------------------------CATGTAGCACTGTATCTA------------....................................GGGCAGACTCTTTATGTTCATGCCTCACTTGGTGGCAATGAGGTCAAT------...---...---------...---GTCAATAGCCTAGATGAACAACACCCGTTATATCGCCAAGATTTAGCAACGACT
TRN  10010101100011000
NAM  O35010_BACSU/185-292
ASQ  GL.PYLWGGISGF--........--.GFDCSGFMYSIFKAN-GYSIPRDAGDQ..-------..----------AKAGKVVPLDDMKAGDLLFFAY.EEGKGAIHHVGLYV----............GGGKMLHSPKTGKSIE--.-.---.-ILTLTETIYEKELCAVRR
DSQ  GGCCTT...CCCTACCTGTGGGGAGGGATCAGCGGGTTT------........................------...GGGTTTGATTGCTCCGGATTTATGTACAGTATATTTAAGGCGAAT---GGATACAGCATCCCCCGTGATGCGGGAGATCAG......---------------------......------------------------------GCTAAGGCAGGGAAGGTTGTCCCGCTTGATGATATGAAAGCCGGTGATCTGCTGTTTTTTGCTTAT...GAGGAAGGAAAAGGAGCGATTCATCACGTCGGTCTGTATGTA------------....................................GGCGGCGGGAAAATGCTTCATTCTCCAAAGACAGGGAAGTCAATCGAA------...---...---------...---ATCCTCACATTAACAGAGACAATCTATGAAAAAGAATTATGTGCGGTGCGCCGC
TRN  10010101100011000
NAM  YDHO_ECOLI/153-263
ASQ  GK.PYRWGGSSPRT-........--.GFDCSGLVYYAYKDLVKIRIPRTANEM..-------..--------YHLRDAAPIERSELKNGDLVFFRT.-QGRGTADHVGVYV----............GNGKFIQSPRTGQEIQ--.-.---.-ITSLSEDYWQRHYVGARR
DSQ  GGTAAG...CCATATCGTTGGGGTGGCAGCTCACCGCGTACC---........................------...GGTTTTGATTGCAGCGGCCTGGTTTATTACGCTTATAAAGATTTGGTGAAAATTCGTATTCCGCGTACGGCGAATGAAATG......---------------------......------------------------TATCACCTGCGTGATGCAGCGCCAATCGAACGTAGTGAACTGAAAAACGGCGACCTGGTCTTTTTCCGTACT...---CAGGGACGCGGCACAGCCGATCATGTCGGCGTGTATGTC------------....................................GGCAACGGCAAATTTATTCAGTCACCGCGCACAGGTCAGGAAATTCAA------...---...---------...---ATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGG
TRN  11011101101011001
NAM  YAFL_ECOLI/131-241
ASQ  GK.PYVWGGTRPDK-........--.GFDCSGLVFYAYNKILEAKLPRTANEM..-------..--------YHYRRATIVANNDLRRGDLLFFHI.-HSREIADHMGVYL----............GDGQFIESPRTGETIR--.-.---.-ISRLAEPFWQDHFLGARR
DSQ  GGCAAG...CCTTACGTCTGGGGCGGTACGCGGCCTGATAAA---........................------...GGCTTTGACTGTAGCGGGTTGGTTTTTTATGCCTACAACAAGATCCTTGAGGCTAAGCTCCCGCGCACGGCCAATGAGATG......---------------------......------------------------TACCACTATCGCCGGGCAACGATTGTGGCGAACAACGACCTGCGCCGGGGAGATTTGCTGTTTTTCCATATC...---CACAGCCGCGAGATAGCCGATCATATGGGCGTGTATTTG------------....................................GGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGG------...---...---------...---ATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGG
TRN  10010101100011010
NAM  P60_LISIN/364-466
ASQ  GK.AYSWGGNGPT--........--.TFDCSGFTKYVFAKS-GISLPRTSGAQ..-------..----------YASTTRISESQAKPGDLVFFDY.---GSGISHVGIYV----............GNGQMINAQ--DNGVK--.-.---.-YDNIHGAGWGKFLVGFGR
DSQ  GGAAAA...GCTTACTCTTGGGGTGGTAACGGACCAACT------........................------...ACATTTGATTGCTCCGGTTTCACTAAATATGTATTCGCTAAATCT---GGAATTTCTCTTCCACGTACTTCTGGCGCACAA......---------------------......------------------------------TACGCTAGCACTACAAGAATTTCCGAATCACAAGCAAAACCTGGTGATTTAGTATTCTTTGACTAT...---------GGTAGCGGAATTTCTCACGTTGGTATTTACGTT------------....................................GGTAATGGTCAAATGATTAACGCGCAA------GACAATGGCGTTAAG------...---...---------...---TATGATAATATCCACGGCGCTGGCTGGGGTAAATTCCTAGTTGGCTTCGGTCGC
TRN  10010101110011000
NAM  P60_LISGR/408-510
ASQ  GK.PYTWGARGPS--........--.TFDCSGFTSYVFNQV-GLSLSGNSATQ..-------..----------YANSTKISESQAQPGDLVFFNY.---GSGIAHVGIYI----............GGGQMIDAQ--DNGVS--.-.---.-IDNIHGNGWGQYLVGFGR
DSQ  GGCAAA...CCTTATACTTGGGGAGCTAGAGGCCCAAGC------........................------...ACATTTGACTGCTCTGGTTTCACTAGCTATGTTTTCAATCAAGTA---GGTCTTAGCCTTTCTGGAAACTCTGCAACACAA......---------------------......------------------------------TATGCAAACTCTACAAAGATCTCTGAATCGCAAGCACAACCAGGCGACTTGGTATTCTTTAACTAC...---------GGCAGCGGCATCGCCCACGTTGGTATCTACATC------------....................................GGCGGCGGACAAATGATCGATGCACAA------GATAACGGCGTTTCT------...---...---------...---ATCGATAATATCCATGGAAATGGTTGGGGACAATATCTAGTTGGCTTCGGTCGC
TRN  10010101110011011
NAM  Q47734_ENTFA/224-330
ASQ  GW.RYVYGGASPTT-........--.SFDCSGLTQWTYGKA-GINLPRTAQQQ..-------..--------YDVTQH--IPLSEAQAGDLVFFHStYNAGSYITHVGIYL----............GNNRMFHA---GDPIG--.-.---.-YADLTSPYWQQHLVGAGR
DSQ  GGCTGG...CGATACGTTTACGGTGGAGCTTCCCCGACTACT---........................------...TCTTTTGATTGTAGCGGACTGACACAATGGACGTATGGAAAAGCT---GGAATTAACTTACCACGAACCGCACAACAGCAA......---------------------......------------------------TATGATGTGACCCAGCAT------ATCCCACTATCGGAAGCACAAGCTGGCGATTTGGTTTTCTTTCATTCTaccTATAACGCTGGCTCTTATATTACTCATGTTGGGATATACCTT------------....................................GGCAATAACCGTATGTTTCATGCA---------GGCGACCCAATCGGT------...---...---------...---TATGCCGACTTAACAAGCCCCTACTGGCAACAGCATTTAGTGGGAGCAGGACGA
TRN  10010101100011010
NAM  YDDH_BACSU/221-327
ASQ  GQ.PYAWGGSNPET-........--.GFDCSGLVQWSFAKA-GITLPRTAQEQ..-------..--------HGATKK--ISEKEATAGDLVFFGG.TYEGKAITHVGIYV----............GNGRMFNSN--DSGIQ--.-.---.-YSDLKSGYWRDHLVSFGR
DSQ  GGGCAA...CCGTATGCCTGGGGAGGTTCAAACCCGGAAACT---........................------...GGATTTGATTGTTCTGGCCTTGTTCAGTGGTCTTTTGCGAAAGCT---GGAATCACTCTTCCTAGAACAGCACAAGAACAA......---------------------......------------------------CATGGGGCAACCAAGAAA------ATAAGTGAAAAAGAAGCGACTGCGGGTGACTTAGTGTTCTTTGGCGGC...ACATACGAAGGAAAAGCCATTACTCACGTCGGCATCTATGTA------------....................................GGCAATGGCAGAATGTTTAATTCAAAT------GACAGTGGAATCCAA------...---...---------...---TATTCTGATCTGAAATCAGGTTACTGGAGAGATCACCTTGTATCTTTTGGACGC
TRN  10010101100011000
NAM  PGDS_BACSU/178-285
ASQ  GV.PYVFGGSTPSE-........--.GFDCSGLVQYVFQQALGIYLPRSAEQQ..-------..--------WAVGEK--VAPQNIKPGDVVYFSN.-TYKTGISHAGIYA----............GAGRFIQAS-RSEKVT--.-.---.-ISYLSEDYWKSKMTGIRR
DSQ  GGTGTC...CCATATGTGTTTGGCGGAAGCACGCCGTCAGAG---........................------...GGCTTTGATTGCTCGGGGCTTGTGCAATATGTGTTTCAACAGGCACTCGGCATTTATCTACCGCGATCAGCCGAACAGCAG......---------------------......------------------------TGGGCAGTGGGCGAGAAG------GTAGCCCCTCAGAACATAAAGCCTGGTGATGTCGTCTATTTCAGCAAT...---ACGTATAAAACGGGAATTTCACATGCAGGCATTTATGCG------------....................................GGCGCAGGCAGGTTCATTCAGGCAAGC---CGGTCAGAAAAAGTAACC------...---...---------...---ATTTCCTATTTGTCAGAGGATTACTGGAAATCGAAGATGACGGGTATTCGCCGA
TRN  10010101110011001
NAM  YOJL_BACSU/311-412
ASQ  GV.PYRWGGNTPA--........--.GFDCSGFIYYLINNVSSISRLSTAGYW..-------..-------------NVMQKVSQPSVGDFVFFTT.--YKSGPSHMGIYL----............GGGDFIHAS--SSGVD--.-.---.-ISNLSNSYWKQRYLGARS
DSQ  GGAGTG...CCTTACCGATGGGGCGGAAACACGCCTGCC------........................------...GGTTTTGATTGCAGCGGCTTCATTTATTACCTCATTAATAATGTATCATCTATATCAAGATTGAGTACGGCAGGGTATTGG......---------------------......---------------------------------------AATGTCATGCAGAAAGTCAGCCAGCCGTCAGTAGGAGACTTTGTCTTCTTTACCACA...------TATAAATCCGGCCCGTCTCACATGGGGATTTATCTA------------....................................GGCGGCGGTGATTTTATTCATGCAAGC------TCATCGGGCGTCGAC------...---...---------...---ATTTCCAATCTCAGCAATTCGTATTGGAAACAGCGGTACTTGGGCGCAAGAAGT
TRN  10010101110011001
NAM  LYTF_BACSU/385-486
ASQ  GV.PYRWGGTTPS--........--.GFDCSGFIYYVLNKVTSVSRLTAAGYW..-------..-------------NTMKSVSQPAVGDFVFFST.--YKAGPSHVGIYL----............GNGEFINAN--DSGVV--.-.---.-ISNMNNSYWKQRYLGAKR
DSQ  GGGGTT...CCGTATCGCTGGGGAGGCACGACACCGTCC------........................------...GGGTTTGACTGCAGCGGATTCATTTACTATGTACTGAACAAAGTCACATCCGTATCTAGATTAACGGCAGCGGGATATTGG......---------------------......---------------------------------------AACACAATGAAATCAGTTAGCCAGCCTGCTGTCGGAGATTTCGTTTTCTTTTCAACA...------TATAAAGCCGGCCCTTCCCACGTCGGAATTTACCTA------------....................................GGCAACGGGGAATTCATAAATGCCAAC------GATTCCGGAGTTGTC------...---...---------...---ATTTCCAATATGAACAACTCTTACTGGAAACAGCGCTATCTCGGTGCAAAACGA
TRN  10010101100011000
NAM  LYTE_BACSU/232-333
ASQ  GT.PYKWGGTTTS--........--.GFDCSGFIWYVLNKQTSVGRTSTAGYW..-------..-------------SSMKSIASPSVGDFVFFTT.--YKSGPSHMGIYI----............GNNSFIHAG--SDGVQ--.-.---.-ISSLNNSYWKPRYLGAKR
DSQ  GGAACG...CCATATAAATGGGGCGGAACGACAACTTCA------........................------...GGCTTTGACTGCAGCGGATTCATTTGGTACGTACTGAATAAACAAACAAGTGTGGGCAGAACAAGCACTGCAGGATACTGG......---------------------......---------------------------------------AGTTCTATGAAGAGCATTGCCAGCCCGTCTGTTGGTGATTTCGTCTTCTTCACAACA...------TATAAATCCGGCCCTTCTCACATGGGGATTTACATT------------....................................GGAAACAACAGTTTCATTCATGCAGGA------TCTGACGGCGTACAA------...---...---------...---ATCAGCAGCCTGAACAACAGCTACTGGAAGCCTCGTTACCTCGGTGCGAAAAGA
TRN  10010101100011001
NAM  NLPC_ECOLI/47-153
ASQ  GT.PYRYGGMTRR--........--.GVDCSGFVVVTMRDRFDLQLPRETKQQ..-------..--------ASIGTQ--IDKDELLPGDLVFFKT.-GSGQNGLHVGIYD----............TNNQFIHAS-TSKGVM--.-.---.-RSSLDNVYWQKNFWQARR
DSQ  GGCACG...CCGTATCGTTATGGTGGCATGACGCGGCGC------........................------...GGTGTGGACTGTTCGGGATTTGTGGTTGTGACGATGCGCGATCGTTTCGATTTGCAGCTGCCCCGTGAAACCAAACAACAA......---------------------......------------------------GCCTCTATTGGCACGCAA------ATTGATAAAGACGAGTTGCTGCCAGGTGACCTGGTCTTTTTCAAAACG...---GGGTCCGGACAAAATGGTTTGCATGTAGGTATTTACGAT------------....................................ACCAACAACCAATTTATCCACGCCTCT---ACCAGCAAGGGAGTGATG------...---...---------...---CGTTCCTCACTTGATAATGTCTATTGGCAGAAAAATTTCTGGCAGGCGAGACGA
TRN  10010101100011001
NAM  Y1314_HAEIN/54-160
ASQ  GT.PYVLGGVSRR--........--.GVDCSGFVQKTFFDRFNLRLPRSTVEQ..-------..--------ANYGKH--VRKEDIQTGDLIFFKT.-GRGPNGYHVGIYV----............KEDKFLHAS-TRGGVV--.-.---.-YSSMNNPYWSKAFWQVRR
DSQ  GGTACA...CCTTATGTGCTCGGCGGCGTTTCTCGTCGT------........................------...GGGGTAGATTGTTCTGGTTTTGTGCAGAAAACTTTCTTCGATCGTTTTAATCTTCGTTTGCCTAGAAGCACTGTTGAACAA......---------------------......------------------------GCTAATTATGGTAAACAT------GTACGCAAAGAAGATATTCAAACTGGCGATTTAATTTTCTTTAAAACT...---GGCAGAGGCCCTAATGGTTATCATGTGGGGATTTATGTA------------....................................AAAGAAGATAAATTCCTTCATGCTTCC---ACCAGAGGGGGAGTCGTC------...---...---------...---TATTCTTCAATGAATAACCCTTATTGGTCGAAAGCCTTCTGGCAAGTCAGACGG
TRN  10010101110011000
NAM  NLPC_HAEIN/80-181
ASQ  GT.RYRMGGTTKR--........--.GIDCSAFMQTTFSEVFGIELPRSTAEQ..-------..--------RHLGRK--INKSELKKGDLVFFRK.------NNHVGVYI----............GNNQFMHAS-TGQGVT--.-.---.-ISSLDEKYWARTYTQSRR
DSQ  GGCACT...CGCTATCGTATGGGCGGTACCACTAAACGT------........................------...GGTATTGATTGTTCAGCATTTATGCAAACTACTTTTTCTGAAGTTTTTGGTATTGAATTGCCTCGTTCTACGGCTGAACAG......---------------------......------------------------CGTCATTTAGGTAGAAAA------ATTAATAAATCAGAACTTAAAAAAGGCGATTTAGTTTTCTTCCGTAAA...------------------AATAATCACGTTGGTGTTTATATT------------....................................GGTAATAACCAATTTATGCACGCAAGT---ACAGGGCAAGGCGTGACA------...---...---------...---ATAAGTTCCCTTGATGAAAAATATTGGGCTAGAACCTACACTCAATCGCGTCGT
TRN  10010101110011000
NAM  SPR_ECOLI/79-183
ASQ  GV.RYRLGGSTKK--........--.GIDCSGFVQRTFREQFGLELPRSTYEQ..-------..--------QEMGKS--VSRSNLRTGDLVLFRA.---GSTGRHVGIYI----............GNNQFVHAS-TSSGVI--.-.---.-ISSMNEPYWKKRYNEARR
DSQ  GGCGTA...CGTTATCGTCTGGGCGGCAGCACTAAAAAA------........................------...GGTATCGATTGTTCTGGTTTCGTACAGCGTACATTCCGTGAGCAATTTGGCTTAGAACTTCCGCGTTCGACTTACGAACAG......---------------------......------------------------CAGGAAATGGGTAAATCT------GTTTCCCGCAGTAATTTGCGTACGGGTGATTTAGTTCTGTTCCGTGCC...---------GGTTCAACGGGACGCCATGTCGGTATTTATATC------------....................................GGCAACAATCAGTTTGTCCATGCTTCC---ACCAGCAGTGGTGTTATT------...---...---------...---ATTTCCAGCATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGG
TRN  11011101101011000
NAM  YVCE_BACSU/355-469
ASQ  GQsPYKFGGGRTQSDi.......NNrIFDCSSFVRWAYASA-GVNLGPVGGTT..-------..------TDTLVGRGQAVSASEMKRGDLVFFDT.---YKTNGHVGIYL----............GNGTFLNDN-TSHGVS--.-.---.-VDSMSNPYWKAAFKGVVR
DSQ  GGACAAtctCCGTACAAGTTTGGCGGCGGACGCACTCAGTCTGATatc.....................AACAACcgtATTTTTGACTGCTCATCATTCGTACGCTGGGCATACGCTTCTGCA---GGTGTTAACCTTGGACCTGTAGGCGGAACAACA......---------------------......------------------ACTGATACGTTAGTTGGCAGAGGACAAGCTGTCAGCGCGTCTGAAATGAAACGCGGAGACCTTGTGTTCTTTGACACT...---------TACAAAACAAATGGACACGTAGGAATCTACTTA------------....................................GGAAACGGTACTTTCCTAAACGACAAT---ACATCTCATGGCGTATCT------...---...---------...---GTTGACTCTATGAGCAATCCTTACTGGAAAGCAGCATTTAAAGGTGTTGTAAGA
TRN  10010101110011000
NAM  P71594_MYCTU/182-281
ASQ  GR.PYVWGATGPN--........--.QFDCSGLVQWAYAQA-GVHLDRTTYQQ..-------..----------INEGIPVPRSQVRPGDLVFPHP.-------GHVQLAI----............GNNLVVEAPHAGASVR--.-.---.-VSSLGNNVQIRRPLSGR-
DSQ  GGCCGT...CCCTATGTCTGGGGCGCAACGGGGCCCAAC------........................------...CAGTTCGACTGTTCCGGTTTGGTCCAGTGGGCCTACGCCCAGGCG---GGTGTTCACCTGGATCGCACCACCTATCAACAG......---------------------......------------------------------ATCAACGAGGGGATCCCGGTGCCGCGCTCACAGGTCCGGCCGGGCGATCTGGTCTTCCCGCACCCC...---------------------GGGCACGTGCAGCTGGCGATC------------....................................GGCAACAATCTGGTCGTCGAGGCGCCCCATGCGGGCGCGTCGGTTCGG------...---...---------...---GTCAGCTCGCTGGGCAACAACGTGCAGATTCGGCGACCGCTGAGTGGCAGA---
TRN  10010101100011001
NAM  O07391_MYCAV/127-243
ASQ  GV.PYSWGGGSLDGPskgvgdgaNItGFDCSGLMRYGFAGV-GVLIPRFSGDQ..-------..--------YNAGRH--IPQDQARRGDLIFYGP.----GGSQHVTMYL----............GNGQMLEASGSAGKVT--.-.---.-VSPVRKPGMTPFLTRIIE
DSQ  GGGGTG...CCGTACTCGTGGGGCGGCGGCTCGCTGGACGGTCCCagcaagggtgtcggcgacggcgccAACATCaccGGGTTCGACTGTTCGGGGCTGATGCGCTACGGCTTCGCCGGGGTC---GGCGTGCTGATCCCGCGGTTCTCCGGCGACCAG......---------------------......------------------------TACAACGCCGGGCGTCAC------ATCCCGCAGGACCAGGCCCGCCGCGGCGACCTCATCTTCTACGGCCCG...------------GGCGGGTCCCAGCACGTCACCATGTACCTG------------....................................GGCAACGGGCAGATGCTCGAGGCGTCCGGCAGCGCCGGCAAGGTCACC------...---...---------...---GTCAGCCCGGTGCGCAAGCCCGGCATGACGCCGTTCCTGACTAGGATCATCGAG
TRN  10010101100011011
NAM  O07390_MYCAV/156-272
ASQ  GV.PYSWGGGNAAGPskgidsgaNIvGFDCSGLVLYSFAGV-GIKLPHYSGSQ..-------..--------YNLGRK--IPSSQMRRGDVIFYGP.----GGSQHVTIYL----............GDGQMLEAPDIGLKVR--.-.---.-VAPVRTSGMTPYVVRYIE
DSQ  GGGGTG...CCCTACTCCTGGGGCGGCGGCAACGCGGCCGGCCCCagcaagggcatcgactccggcgccAACATCgtcGGCTTCGACTGTTCGGGGCTGGTGCTGTATTCGTTCGCCGGGGTG---GGCATCAAGCTGCCGCACTACTCGGGCTCGCAG......---------------------......------------------------TACAACCTGGGCCGCAAG------ATCCCGTCCTCGCAGATGCGCCGCGGCGACGTCATCTTCTACGGACCG...------------GGCGGCTCCCAGCACGTCACCATCTACCTC------------....................................GGCGACGGCCAGATGCTCGAGGCGCCCGATATCGGGTTGAAGGTCCGC------...---...---------...---GTCGCCCCCGTCCGCACCAGCGGCATGACGCCCTACGTGGTCCGTTACATCGAG
TRN  11011111101111111
NAM  O06624_MYCTU/55-168
ASQ  GV.PFSWAGGGISGPtrgtgtgiNTvGFDASGLIQYAYAGA-GLKLPRSSGQM..-------..--------YKVGQK--VLPQQARKGDLIFYGP.----EGTQSVALYL----............GKGQMLEV---GDVVQ--.-.---.-VSPVRTNGMTPYLVRVLG
DSQ  GGCGTG...CCGTTCTCCTGGGCCGGCGGCGGCATCAGCGGCCCCacgcgcggcaccggtaccggcatcAACACCgtcGGGTTCGACGCCTCCGGTTTGATCCAGTACGCCTATGCCGGTGCC---GGGCTAAAGCTGCCGCGTTCTTCCGGCCAGATG......---------------------......------------------------TACAAGGTTGGGCAAAAG------GTCCTGCCGCAGCAAGCGCGCAAGGGCGACCTGATCTTCTACGGCCCC...------------GAAGGCACGCAAAGCGTCGCGTTATACCTC------------....................................GGGAAGGGCCAGATGCTGGAGGTG---------GGCGACGTCGTCCAG------...---...---------...---GTTTCGCCGGTGCGCACCAACGGCATGACGCCTTACCTGGTCCGGGTTCTCGGG
TRN  11011111101111110
NAM  P94618_CLOBE/412-511
ASQ  GV.PYVWGGTDPS--........--.GFDCSGLVMYCYAHF-GVNLPHYTGDQ..-------..------------VKYGTVVTNLQPGDLLFFGS.---TSDPYHVAIYS----............GNGYMIEAPKTGETVH--.-.---.-ETPIRSYSIAKRIFN---
DSQ  GGTGTA...CCTTATGTATGGGGTGGTACAGATCCTAGT------........................------...GGATTCGATTGTTCAGGCTTAGTTATGTATTGTTATGCACACTTT---GGAGTAAATCTCCCACATTATACAGGAGATCAA......---------------------......------------------------------------GTTAAATATGGAACTGTTGTTACAAACCTTCAACCAGGAGATTTATTATTCTTCGGTTCT...---------ACATCTGATCCTTATCATGTAGCTATTTATTCA------------....................................GGTAATGGTTATATGATAGAGGCTCCAAAAACTGGTGAAACTGTTCAC------...---...---------...---GAAACACCTATTAGATCATACTCTATAGCAAAGAGAATATTTAAT---------
TRN  10010101110011000
NAM  P54_ENTFC/414-516
ASQ  GT.PYVWGGKDPS--........--.GFDCSGFTRYVYLQVTGRDIGGWTVPQ..-------..--------ESAGTK--ISVSQAKAGDLLFWGS.---AGGTYHVAISL----............GGGQYIHAPQPGENVK--.-.---.-VGSVQ---WYTPDFAVSM
NAM  Q51835_PORGI/68-178
ASQ  GK.PYRYQGPSSW--........--.PMDCSGYVAYLYSCY-DIHIPRSSSAL..-------..------------YNYTIPIRHPLPGDLLFFRGsKNHKGTIGHVALLIEVCD............DELIMLHNTNSRGIII--.-.---.-ESLQRSSYFSKRYIVPVV
DSQ  GGCAAA...CCCTACAGGTATCAGGGGCCATCGTCTTGG------........................------...CCGATGGATTGCTCCGGCTACGTGGCCTACCTCTATTCCTGCTAC---GATATTCATATTCCACGCTCTTCATCGGCACTG......---------------------......------------------------------------TACAACTATACCATTCCCATACGCCATCCTCTACCGGGTGATCTGCTTTTCTTCCGTGGTagcAAGAATCACAAAGGGACTATCGGCCATGTGGCACTGTTGATCGAAGTTTGCGAT....................................GACGAACTAATCATGCTACACAACACCAATAGCAGAGGTATTATCATC------...---...---------...---GAATCACTGCAACGAAGTTCGTACTTCAGCAAGCGTTACATCGTGCCGGTCGTT
TRN  10010101100011001
NAM  Q9FZU5_9VIRU/118-229
ASQ  GR.VFEYG-------........--.KTDCGALVRDAFMLM-GLVFPDHPRGD..-MDEDAA..AGFWEKHLENCGFS--RVSDGLCAGDVVLTAT.---GGHASHAVLYL----............GNDWMLHHA--YNQLS--.-.---.-CRVPYTRYWADVTHSVWR
DSQ  GGGCGT...GTATTCGAATACGGC---------------------........................------...AAGACGGATTGCGGCGCGCTGGTGCGCGATGCCTTCATGCTGATG---GGGCTGGTTTTTCCCGACCATCCACGCGGTGAT......---ATGGATGAGGACGCAGCG......GCGGGCTTTTGGGAAAAGCATTTGGAAAACTGCGGGTTTTCC------CGTGTTTCAGACGGCCTTTGCGCCGGCGATGTGGTCTTGACGGCAACG...---------GGCGGGCATGCGTCCCATGCCGTCCTGTATTTG------------....................................GGCAACGACTGGATGCTGCACCATGCC------TACAATCAATTGAGC------...---...---------...---TGCCGTGTACCTTATACCCGCTATTGGGCGGATGTTACGCACAGCGTTTGGCGG
TRN  11011111101111101
NAM  Q9RIE1_YERPE/136-252
ASQ  GR.PYVFG-------........--.VFDCWMLCRDYLKREFNVELNPNPHLH.iPSWYTGD..TDILDQNYRNEGLVRLAPGTEPQRGDVFFIQY.---GKMPDHCAVYI----............GDGMILHHQ--IDRLS--.-.---.-CRAYYGGMYQKHTTHHLR
DSQ  GGTCGA...CCCTATGTGTTCGGT---------------------........................------...GTCTTCGACTGCTGGATGCTGTGCCGCGACTACCTGAAGCGTGAGTTCAACGTCGAGCTGAATCCGAACCCGCACCTGCAT...attCCATCGTGGTACACGGGCGAT......ACCGACATTCTCGATCAGAACTACCGCAATGAAGGGCTTGTTCGTCTGGCGCCGGGGACGGAACCCCAGCGTGGTGACGTCTTCTTCATTCAGTAC...---------GGAAAGATGCCTGACCACTGCGCGGTGTACATC------------....................................GGAGACGGAATGATCCTGCACCACCAG------ATCGACCGTCTGAGC------...---...---------...---TGTCGCGCTTATTACGGTGGCATGTACCAGAAACACACGACGCACCACCTGCGT
TRN  11011101101011011
NAM  Q45906_COXBU/3-116
ASQ  -R.PFIYS-------........--.VYDCYSLARDYYKKNFGIKLNDYDRPD..-FWWEKD..ANLYMENYKKEGFKE-IPAKELRCGDLILMKI.--NSPVPNHIAIYL----............GNGEILHHL--ELQPS--.-.---.-KREDYREKWRKKSVLFLR
DSQ  ---CGG...CCGTTTATTTATAGT---------------------........................------...GTCTATGATTGCTATTCATTAGCCAGAGATTATTACAAAAAGAATTTTGGGATTAAGTTGAATGATTACGATCGGCCAGAT......---TTTTGGTGGGAGAAAGAC......GCTAATTTATATATGGAGAATTATAAAAAAGAAGGATTTAAAGAA---ATACCCGCGAAAGAGTTGCGCTGTGGAGATCTTATTTTAATGAAAATA...------AATTCTCCGGTCCCAAATCATATTGCTATTTATCTT------------....................................GGGAATGGAGAGATACTCCACCACCTT------GAGTTGCAACCGAGT------...---...---------...---AAACGCGAGGATTACAGGGAAAAGTGGCGAAAGAAATCAGTGCTTTTCTTGCGG
TRN  10010101110011000
NAM  Q9I5S7_PSEAE/119-250
ASQ  GR.EFAHG-------........--.VLDCWSLCRDWYRREAGLELPDYPRRD..-GWWETG..ESLYEQHYAAAGFRP-VPLAGIRRGDMLVMQV.-GRALHPNHAGIYLGNDWrldsepvqalggDGPFLLHHL--YGRLS--.-.---.-TRDVFGGPWIERTRLVLR
DSQ  GGCCGC...GAGTTCGCCCACGGC---------------------........................------...GTGCTCGACTGCTGGAGCCTCTGTCGCGACTGGTACCGCCGCGAGGCAGGTTTGGAGCTTCCGGACTATCCGCGCCGCGAC......---GGTTGGTGGGAAACCGGC......GAGAGCCTCTACGAGCAGCACTATGCGGCGGCTGGATTCCGGCCG---GTGCCGCTGGCCGGAATCCGCCGCGGCGACATGCTGGTGATGCAGGTC...---GGGAGGGCGCTGCACCCGAACCACGCGGGCATCTACCTGGGCAATGACTGGcgtctggacagcgagccggtccaggcgctcggcggcGACGGACCGTTCCTGCTGCACCACCTG------TACGGACGGCTGTCG------...---...---------...---ACCCGCGACGTGTTCGGCGGACCCTGGATCGAACGCACGCGCCTGGTCTTGCGG
TRN  10010101100011011
NAM  Q9MCU3_BPHK0/116-231
ASQ  ER.PFVLG-------........--.HFDCWGLVMSYFRQTHGIELHDYRVDY..-PWWENAypDNFYQDCWYECGFR--EFDGPPQEGDLVIMQV.--QADKWNHAGILL----............EGNMLLHHL--YGHLS--.-.---.-QRVPYGGYWQERTMKILR
DSQ  GAGCGT...CCGTTTGTGCTTGGA---------------------........................------...CACTTCGACTGCTGGGGGCTGGTAATGAGCTATTTCCGGCAAACGCATGGTATCGAGCTCCACGATTACCGGGTGGATTAT......---CCCTGGTGGGAAAACGCCtatccgGACAATTTTTATCAGGATTGCTGGTATGAATGCGGATTCAGG------GAGTTTGACGGCCCGCCTCAGGAAGGGGACCTCGTCATCATGCAGGTG...------CAGGCCGATAAGTGGAATCATGCCGGGATTTTACTG------------....................................GAGGGTAACATGCTGCTGCACCACCTG------TACGGACATCTGAGC------...---...---------...---CAGCGCGTGCCGTATGGGGGCTACTGGCAGGAAAGGACGATGAAGATTCTTAGA
TRN  10010101100011010
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