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PANDIT Protein and Associated NucleotideDomains with Inferred Trees

FAM  PF00641
PID  zf-RanBP
DES  Zn-finger in Ran binding protein and others
IPR  IPR001876
ANO  23
ALN  33
AID  0.323345
APH  (((((((((SOL_DROME/643-673:2.24229,(SOL_DROME/135-164:0.32348,(MDM2_HUMAN/299-328:1.16441,SOL_DROME/6-35:0.65058):0.80249):0.32568):0.81710,SOL_DROME/927-956:0.08288):0.99318,SOL_DROME/744-774:0.87877):0.08782,(((((NU153_HUMAN/722-751:0.29943,(NU153_HUMAN/793-822:0.09385,NU153_RAT/789-818:0.12874):0.43492):0.07220,NU153_HUMAN/851-880:0.17671):0.17598,((RBP2_HUMAN/1479-1508:0.13378,((RBP2_HUMAN/1543-1572:0.16921,RBP2_HUMAN/1415-1444:0.36969):0.06236,RBP2_HUMAN/1606-1635:0.03055):0.09217):0.12163,RBP2_HUMAN/1781-1810:0.37110):0.14484):0.18388,NU153_HUMAN/657-687:0.33199):0.06629,RBP2_HUMAN/1351-1381:0.50340):0.39684):0.16772,SOL_DROME/704-733:0.83325):0.39140,NRP1_YEAST/581-610:0.21064):0.28623,RBM5_HUMAN/181-210:0.90779):0.19076,NRP1_YEAST/355-384:0.45008):0.36033,EWS_HUMAN/518-549:0.07484,FUS_HUMAN/422-453:0.19210);
ATP  (((((((((SOL_DROME/643-673,(SOL_DROME/135-164,(MDM2_HUMAN/299-328,SOL_DROME/6-35))),SOL_DROME/927-956),SOL_DROME/744-774),(((((NU153_HUMAN/722-751,(NU153_HUMAN/793-822,NU153_RAT/789-818)),NU153_HUMAN/851-880),((RBP2_HUMAN/1479-1508,((RBP2_HUMAN/1543-1572,RBP2_HUMAN/1415-1444),RBP2_HUMAN/1606-1635)),RBP2_HUMAN/1781-1810)),NU153_HUMAN/657-687),RBP2_HUMAN/1351-1381)),SOL_DROME/704-733),NRP1_YEAST/581-610),RBM5_HUMAN/181-210),NRP1_YEAST/355-384),EWS_HUMAN/518-549,FUS_HUMAN/422-453);
ATL  17.774
DNO  22
DLN  99
DID  0.426007
DPH  ((NU153_HUMAN/657-687:0.25275,(((EWS_HUMAN/518-549:0.13581,FUS_HUMAN/422-453:0.13135):0.26445,((NRP1_YEAST/581-610:0.00000,SOL_DROME/927-956:0.70678):0.16795,NRP1_YEAST/355-384:0.61853):0.10214):0.03734,((RBM5_HUMAN/181-210:0.36845,SOL_DROME/704-733:0.54460):0.00000,((MDM2_HUMAN/299-328:0.58785,(SOL_DROME/6-35:0.26020,SOL_DROME/135-164:0.55095):0.21420):0.00000,(SOL_DROME/744-774:0.41019,SOL_DROME/643-673:0.71452):0.29486):0.40763):0.38649):0.38483):0.17725,(RBP2_HUMAN/1351-1381:0.35105,((RBP2_HUMAN/1415-1444:0.29394,(RBP2_HUMAN/1479-1508:0.13207,(RBP2_HUMAN/1543-1572:0.07029,RBP2_HUMAN/1606-1635:0.10447):0.03616):0.14044):0.00000,RBP2_HUMAN/1781-1810:0.31664):0.07926):0.15364,(NU153_HUMAN/722-751:0.15849,(NU153_HUMAN/851-880:0.24702,NU153_HUMAN/793-822:0.39383):0.14892):0.07996);
DTP  ((NU153_HUMAN/657-687,(((EWS_HUMAN/518-549,FUS_HUMAN/422-453),((NRP1_YEAST/581-610,SOL_DROME/927-956),NRP1_YEAST/355-384)),((RBM5_HUMAN/181-210,SOL_DROME/704-733),((MDM2_HUMAN/299-328,(SOL_DROME/6-35,SOL_DROME/135-164)),(SOL_DROME/744-774,SOL_DROME/643-673))))),(RBP2_HUMAN/1351-1381,((RBP2_HUMAN/1415-1444,(RBP2_HUMAN/1479-1508,(RBP2_HUMAN/1543-1572,RBP2_HUMAN/1606-1635))),RBP2_HUMAN/1781-1810)),(NU153_HUMAN/722-751,(NU153_HUMAN/851-880,NU153_HUMAN/793-822)));
DTL  10.4253
RID  0.322185
RPH  (((((((((((MDM2_HUMAN/299-328:1.17702,SOL_DROME/6-35:0.64767):0.81315,SOL_DROME/135-164:0.32252):0.32592,SOL_DROME/643-673:2.24711):0.83798,SOL_DROME/927-956:0.07599):1.00043,SOL_DROME/744-774:0.87825):0.08516,(((((NU153_HUMAN/722-751:0.29204,NU153_HUMAN/793-822:0.48521):0.07663,NU153_HUMAN/851-880:0.18265):0.17018,((RBP2_HUMAN/1479-1508:0.13294,((RBP2_HUMAN/1543-1572:0.16867,RBP2_HUMAN/1415-1444:0.37145):0.06269,RBP2_HUMAN/1606-1635:0.03134):0.09332):0.12178,RBP2_HUMAN/1781-1810:0.36815):0.14501):0.18271,NU153_HUMAN/657-687:0.33765):0.06565,RBP2_HUMAN/1351-1381:0.50270):0.39956):0.16822,SOL_DROME/704-733:0.83656):0.39429,NRP1_YEAST/581-610:0.20681):0.29071,RBM5_HUMAN/181-210:0.91347):0.19261,NRP1_YEAST/355-384:0.44928):0.36391,EWS_HUMAN/518-549:0.07556,FUS_HUMAN/422-453:0.19242);
RTP  (((((((((((MDM2_HUMAN/299-328,SOL_DROME/6-35),SOL_DROME/135-164),SOL_DROME/643-673),SOL_DROME/927-956),SOL_DROME/744-774),(((((NU153_HUMAN/722-751,NU153_HUMAN/793-822),NU153_HUMAN/851-880),((RBP2_HUMAN/1479-1508,((RBP2_HUMAN/1543-1572,RBP2_HUMAN/1415-1444),RBP2_HUMAN/1606-1635)),RBP2_HUMAN/1781-1810)),NU153_HUMAN/657-687),RBP2_HUMAN/1351-1381)),SOL_DROME/704-733),NRP1_YEAST/581-610),RBM5_HUMAN/181-210),NRP1_YEAST/355-384),EWS_HUMAN/518-549,FUS_HUMAN/422-453);
RTL  17.6679
LNK  EWS_HUMAN/518-549:Q01844:X66899
LNK  FUS_HUMAN/422-453:P35637:S62140
LNK  MDM2_HUMAN/299-328:Q00987:M92424
LNK  NRP1_YEAST/355-384:P32770:X68020
LNK  NRP1_YEAST/581-610:P32770:X68020
LNK  NU153_HUMAN/657-687:P49790:Z25535
LNK  NU153_HUMAN/722-751:P49790:Z25535
LNK  NU153_HUMAN/793-822:P49790:Z25535
LNK  NU153_HUMAN/851-880:P49790:Z25535
LNK  NU153_RAT/789-818:P49791:
LNK  RBM5_HUMAN/181-210:P52756:U23946
LNK  RBP2_HUMAN/1351-1381:P49792:L41840
LNK  RBP2_HUMAN/1415-1444:P49792:L41840
LNK  RBP2_HUMAN/1479-1508:P49792:L41840
LNK  RBP2_HUMAN/1543-1572:P49792:L41840
LNK  RBP2_HUMAN/1606-1635:P49792:L41840
LNK  RBP2_HUMAN/1781-1810:P49792:L41840
LNK  SOL_DROME/135-164:P27398:M64084
LNK  SOL_DROME/6-35:P27398:M64084
LNK  SOL_DROME/643-673:P27398:M64084
LNK  SOL_DROME/704-733:P27398:M64084
LNK  SOL_DROME/744-774:P27398:M64084
LNK  SOL_DROME/927-956:P27398:AE003568
AMK  xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  SOL_DROME/643-673
ASQ  RSK-MWIC.IKCSYAYNRLWLQTCEMCEAKAEQ
DSQ  CGCAGTAAG---ATGTGGATATGC...ATCAAATGTTCCTATGCCTACAACCGACTCTGGCTCCAGACTTGCGAGATGTGCGAGGCCAAAGCCGAACAG
TRN  10010101110011011
NAM  SOL_DROME/135-164
ASQ  LNR-RWVC.-HACGTDNSSVTWHCLICDTVSYL
DSQ  CTGAATCGG---CGGTGGGTGTGC...---CACGCCTGCGGCACGGACAACAGCTCGGTCACCTGGCACTGCCTCATCTGTGACACGGTCAGCTATCTG
TRN  11011111101111111
NAM  SOL_DROME/6-35
ASQ  SVL-QWSC.-TKCNTINPTESLKCFNCGTVRKV
DSQ  TCCGTGCTG---CAGTGGTCGTGC...---ACCAAATGTAACACTATCAATCCCACGGAGTCGCTCAAGTGCTTCAATTGCGGCACCGTCCGCAAGGTG
TRN  11011101101011011
NAM  MDM2_HUMAN/299-328
ASQ  LAD-YWKC.-TSCNEMNPPLPSHCNRCWALREN
DSQ  TTAGCTGAC---TATTGGAAATGC...---ACTTCATGCAATGAAATGAATCCCCCCCTTCCATCACATTGCAACAGATGTTGGGCCCTTCGTGAGAAT
TRN  10010101110011000
NAM  RBP2_HUMAN/1781-1810
ASQ  RKG-QWDC.-SVCCVQNESSSLKCVACDASKPT
DSQ  AGGAAAGGA---CAGTGGGATTGT...---AGTGTTTGCTGTGTACAAAATGAGAGTTCTTCCTTAAAATGTGTGGCTTGTGATGCCTCTAAACCAACT
TRN  10110101110011010
NAM  RBP2_HUMAN/1606-1635
ASQ  KEG-QWDC.-SVCLVRNEASATKCIACQNPGKQ
DSQ  AAGGAGGGA---CAGTGGGATTGC...---AGTGTGTGCTTAGTAAGAAATGAAGCCAGTGCTACCAAATGTATTGCTTGTCAGAATCCAGGTAAACAA
TRN  10110101110011010
NAM  RBP2_HUMAN/1479-1508
ASQ  KEG-QWDC.-SACLVQNEGSSTKCAACQNPRKQ
DSQ  AAGGAAGGA---CAGTGGGATTGC...---AGTGCATGTTTGGTACAAAATGAGGGGAGCTCTACAAAATGTGCTGCTTGTCAGAATCCGAGAAAACAG
TRN  10110101110011011
NAM  RBP2_HUMAN/1543-1572
ASQ  KEG-QWDC.-SSCLVRNEANATRCVACQNPDKP
DSQ  AAGGAAGGA---CAGTGGGATTGC...---AGTTCATGCTTAGTGCGAAATGAAGCAAATGCTACAAGATGTGTTGCTTGTCAGAATCCGGATAAACCA
TRN  10110101110011000
NAM  RBP2_HUMAN/1415-1444
ASQ  KEG-HWDC.-SICLVRNEPTVSRCIACQNTKSA
DSQ  AAAGAAGGT---CACTGGGATTGT...---AGTATTTGTTTAGTAAGAAATGAACCTACTGTATCTAGGTGCATTGCGTGTCAGAATACAAAATCTGCT
TRN  10110101110011010
NAM  RBP2_HUMAN/1351-1381
ASQ  KEGSWWHC.-NSCSLKNASTAKKCVSCQNLNPS
DSQ  AAAGAAGGGTCTTGGTGGCATTGT...---AACAGCTGCTCATTAAAGAATGCTTCAACTGCTAAGAAATGTGTATCATGCCAAAATCTAAACCCAAGC
TRN  11011101111011000
NAM  NU153_HUMAN/657-687
ASQ  KAGSSWQC.-DTCLLQNKVTDNKCIACQAAKLS
DSQ  AAAGCTGGGTCATCATGGCAGTGT...---GATACATGTCTACTCCAGAACAAAGTTACAGACAACAAATGCATAGCCTGTCAAGCAGCAAAATTGTCA
TRN  10010101110011001
NAM  NU153_RAT/789-818
ASQ  PVG-SWEC.-PVCCVSNKAEDSRCVSCTSEKPG
NAM  NU153_HUMAN/793-822
ASQ  PIG-SWEC.-SVCCVSNNAEDNKCVSCMSEKPG
DSQ  CCCATTGGA---TCTTGGGAGTGT...---TCAGTATGCTGTGTTTCTAATAATGCAGAAGACAATAAGTGTGTGTCCTGTATGTCTGAGAAACCAGGA
TRN  11111101111011001
NAM  NU153_HUMAN/851-880
ASQ  PEG-SWDC.-ELCLVQNKADSTKCLACESAKPG
DSQ  CCCGAGGGA---AGCTGGGACTGT...---GAATTGTGCCTAGTGCAGAATAAGGCAGACTCTACCAAATGTTTGGCATGTGAAAGTGCAAAGCCAGGC
TRN  11011101111011011
NAM  NU153_HUMAN/722-751
ASQ  VIG-TWDC.-DTCLVQNKPEAIKCVACETPKPG
DSQ  GTGATAGGC---ACTTGGGATTGT...---GATACCTGTTTAGTGCAAAATAAACCTGAAGCAATAAAATGTGTAGCCTGTGAAACACCGAAACCTGGA
TRN  10010101110011010
NAM  RBM5_HUMAN/181-210
ASQ  KFE-DWLC.-NKCCLNNFRKRLKCFRCGADKFD
DSQ  AAGTTTGAA---GATTGGCTTTGT...---AACAAGTGCTGCCTTAACAATTTCAGGAAAAGACTAAAATGCTTCCGATGTGGAGCAGACAAGTTTGAC
TRN  10010101110011011
NAM  FUS_HUMAN/422-453
ASQ  RAG-DWKCpNPTCENMNFSWRNECNQCKAPKPD
DSQ  CGAGCTGGT---GACTGGAAGTGTcctAATCCCACCTGTGAGAATATGAACTTCTCTTGGAGGAATGAATGCAACCAGTGTAAGGCCCCTAAACCAGAT
TRN  10110101110011011
NAM  EWS_HUMAN/518-549
ASQ  RAG-DWQCpNPGCGNQNFAWRTECNQCKAPKPE
DSQ  CGAGCTGGA---GACTGGCAGTGTcccAATCCGGGTTGTGGAAACCAGAACTTCGCCTGGAGAACAGAGTGCAACCAGTGTAAGGCCCCAAAGCCTGAA
TRN  10110101110011011
NAM  NRP1_YEAST/355-384
ASQ  RPG-DWNC.-PSCGFSNFQRRTACFRCSFPAPS
DSQ  AGACCAGGT---GACTGGAATTGC...---CCATCTTGTGGTTTTTCAAACTTTCAAAGACGTACTGCATGTTTTAGATGTTCTTTTCCGGCACCATCA
TRN  10110101110011001
NAM  NRP1_YEAST/581-610
ASQ  RAG-DWKC.-STCTYHNFAKNVVCLRCGGPKSI
DSQ  AGAGCAGGA---GATTGGAAGTGT...---TCCACGTGCACGTATCATAACTTTGCTAAAAACGTAGTGTGCTTACGCTGTGGTGGTCCAAAATCAATA
TRN  10010101110011000
NAM  SOL_DROME/927-956
ASQ  STK-KWQC.-PACTYDNCAASVVCDICSSPRGL
DSQ  AGCACAAAG---AAGTGGCAGTGT...---CCCGCGTGCACGTACGATAACTGTGCCGCTTCCGTCGTTTGTGACATCTGCTCGAGTCCGCGCGGCCTG
TRN  11011111101111111
NAM  SOL_DROME/744-774
ASQ  RKGEFWTC.-SHCTLKNSLHSPVCSACKSHRQP
DSQ  CGAAAGGGCGAGTTCTGGACCTGC...---AGCCACTGTACGCTCAAGAACTCGCTGCACTCGCCGGTCTGCAGTGCCTGCAAGTCCCACCGCCAGCCG
TRN  11011111101111111
NAM  SOL_DROME/704-733
ASQ  RDE-PWTC.-KKCTLVNYSTAMACVVCGGSKLK
DSQ  CGCGACGAG---CCATGGACCTGC...---AAGAAGTGCACCCTGGTTAACTACTCGACAGCAATGGCCTGCGTGGTGTGCGGCGGCTCCAAGCTGAAA
TRN  11011101101011011
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