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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF00623 - RNA_pol_Rpb1_2)
FAM  PF00623
PID  RNA_pol_Rpb1_2
DES  RNA polymerase Rpb1, domain 2
IPR  IPR000722
ANO  35
ALN  189
AID  0.431241
APH  (((((((((((((((Q9AXN0_9EUKA/328-493:0.20767,((((O77375_PLAF7/375-540:0.27862,RPB1_CAEEL/350-511:0.19508):0.05810,(RPB1_SCHPO/348-513:0.11288,Q9HGZ5_ASPOR/357-522:0.12974):0.06401):0.07888,O96446_9MICR/313-476:0.25106):0.05505,Q9AVW8_GUITH/327-492:0.24671):0.07987):0.08036,RPB1_TRYBB/350-513:0.35985):0.16418,((RPC1_YEAST/370-537:0.19313,(((Q9VXP9_DROME/357-524:0.16556,RPC1_HUMAN/358-525:0.13021):0.07356,RPC1_SCHPO/352-519:0.18663):0.06861,Q18566_CAEEL/354-521:0.23475):0.07101):0.04853,Q9LVH0_ARATH/359-525:0.30349):0.09746):0.09435,((Q9QTF4_RSIV/277-427:0.69520,Q26008_PLAFA/731-907:0.46310):0.14969,(O17628_CAEEL/473-653:0.47918,((RPA1_YEAST/473-653:0.27188,RPA1_HUMAN/434-614:0.22158):0.14629,RPA1_DROME/416-591:0.16570):0.08427):0.21799):0.13474):0.13460,RPO1_ASFB7/316-483:0.85542):0.07725,Q98RN1_GUITH/314-480:0.36381):0.26970,Q9AW39_GUITH/417-601:0.57052):0.68708,Q9AIH0_CARRU/318-460:0.32189):0.20306,O21238_RECAM/354-506:0.45488):0.27499,RPOC_THEMA/635-779:0.22421):0.08412,RPOC_THEAQ/620-765:0.21807):0.02862,(RPOC_XYLFA/344-486:0.16100,(RPOC_AQUAE/474-616:0.15986,(RPOC_BORBU/333-475:0.15092,RPOC_TREPA/333-475:0.12705):0.10785):0.05194):0.03244):0.08309,RPOC_CHLTR/347-489:0.11973):0.21484,RPOC_MYCPU/418-560:0.17700):0.19007,RPOC_MYCGE/407-558:0.13034,RPOC_UREPA/402-553:0.13765);
ATP  (((((((((((((((Q9AXN0_9EUKA/328-493,((((O77375_PLAF7/375-540,RPB1_CAEEL/350-511),(RPB1_SCHPO/348-513,Q9HGZ5_ASPOR/357-522)),O96446_9MICR/313-476),Q9AVW8_GUITH/327-492)),RPB1_TRYBB/350-513),((RPC1_YEAST/370-537,(((Q9VXP9_DROME/357-524,RPC1_HUMAN/358-525),RPC1_SCHPO/352-519),Q18566_CAEEL/354-521)),Q9LVH0_ARATH/359-525)),((Q9QTF4_RSIV/277-427,Q26008_PLAFA/731-907),(O17628_CAEEL/473-653,((RPA1_YEAST/473-653,RPA1_HUMAN/434-614),RPA1_DROME/416-591)))),RPO1_ASFB7/316-483),Q98RN1_GUITH/314-480),Q9AW39_GUITH/417-601),Q9AIH0_CARRU/318-460),O21238_RECAM/354-506),RPOC_THEMA/635-779),RPOC_THEAQ/620-765),(RPOC_XYLFA/344-486,(RPOC_AQUAE/474-616,(RPOC_BORBU/333-475,RPOC_TREPA/333-475)))),RPOC_CHLTR/347-489),RPOC_MYCPU/418-560),RPOC_MYCGE/407-558,RPOC_UREPA/402-553);
ATL  13.7066
DNO  33
DLN  567
DID  0.485823
DPH  ((((((((((((Q9AXN0_9EUKA/328-493:0.27633,(RPB1_TRYBB/350-513:0.38258,((((O17628_CAEEL/473-653:0.39997,RPA1_HUMAN/434-614:0.27302):0.09873,RPA1_DROME/416-591:0.19258):0.10268,(RPA1_YEAST/473-653:0.27678,Q9QTF4_RSIV/277-427:0.59116):0.07978):0.19123,(((Q9VXP9_DROME/357-524:0.20859,RPC1_HUMAN/358-525:0.19229):0.12244,(RPC1_SCHPO/352-519:0.20998,RPC1_YEAST/370-537:0.25822):0.10226):0.04728,Q9LVH0_ARATH/359-525:0.28555):0.06904):0.08029):0.10760):0.04890,(RPO1_ASFB7/316-483:0.72996,((RPB1_SCHPO/348-513:0.18668,Q9HGZ5_ASPOR/357-522:0.19843):0.06813,RPB1_CAEEL/350-511:0.26394):0.03656):0.03716):0.15346,O77375_PLAF7/375-540:0.25506):0.06394,Q9AVW8_GUITH/327-492:0.20759):0.05453,O96446_9MICR/313-476:0.27904):0.14352,Q98RN1_GUITH/314-480:0.32723):0.06939,(Q9AW39_GUITH/417-601:0.49126,Q26008_PLAFA/731-907:0.26615):0.08052):0.34123,Q9AIH0_CARRU/318-460:0.21365):0.09704,O21238_RECAM/354-506:0.28867):0.21524,(RPOC_CHLTR/347-489:0.17370,(RPOC_BORBU/333-475:0.19344,((RPOC_THEAQ/620-765:0.28707,(RPOC_THEMA/635-779:0.25736,RPOC_AQUAE/474-616:0.17395):0.07448):0.14243,RPOC_TREPA/333-475:0.16861):0.08644):0.11706):0.06700):0.12525,RPOC_MYCPU/418-560:0.19904):0.12521,RPOC_MYCGE/407-558:0.21261,RPOC_UREPA/402-553:0.18457);
DTP  ((((((((((((Q9AXN0_9EUKA/328-493,(RPB1_TRYBB/350-513,((((O17628_CAEEL/473-653,RPA1_HUMAN/434-614),RPA1_DROME/416-591),(RPA1_YEAST/473-653,Q9QTF4_RSIV/277-427)),(((Q9VXP9_DROME/357-524,RPC1_HUMAN/358-525),(RPC1_SCHPO/352-519,RPC1_YEAST/370-537)),Q9LVH0_ARATH/359-525)))),(RPO1_ASFB7/316-483,((RPB1_SCHPO/348-513,Q9HGZ5_ASPOR/357-522),RPB1_CAEEL/350-511))),O77375_PLAF7/375-540),Q9AVW8_GUITH/327-492),O96446_9MICR/313-476),Q98RN1_GUITH/314-480),(Q9AW39_GUITH/417-601,Q26008_PLAFA/731-907)),Q9AIH0_CARRU/318-460),O21238_RECAM/354-506),(RPOC_CHLTR/347-489,(RPOC_BORBU/333-475,((RPOC_THEAQ/620-765,(RPOC_THEMA/635-779,RPOC_AQUAE/474-616)),RPOC_TREPA/333-475)))),RPOC_MYCPU/418-560),RPOC_MYCGE/407-558,RPOC_UREPA/402-553);
DTL  12.2822
RID  0.428527
RPH  (((((((((((((((Q9AXN0_9EUKA/328-493:0.21341,((((O77375_PLAF7/375-540:0.27782,RPB1_CAEEL/350-511:0.19592):0.05894,(RPB1_SCHPO/348-513:0.11274,Q9HGZ5_ASPOR/357-522:0.12965):0.06331):0.07599,O96446_9MICR/313-476:0.25285):0.05249,Q9AVW8_GUITH/327-492:0.25143):0.07718):0.08156,RPB1_TRYBB/350-513:0.35494):0.17721,((((Q9VXP9_DROME/357-524:0.16540,RPC1_HUMAN/358-525:0.13146):0.08642,RPC1_SCHPO/352-519:0.17163):0.08485,RPC1_YEAST/370-537:0.19054):0.08321,Q9LVH0_ARATH/359-525:0.27831):0.09994):0.08601,((Q9QTF4_RSIV/277-427:0.69403,Q26008_PLAFA/731-907:0.45789):0.14490,(O17628_CAEEL/473-653:0.47868,((RPA1_YEAST/473-653:0.27229,RPA1_HUMAN/434-614:0.22163):0.14473,RPA1_DROME/416-591:0.16711):0.08421):0.22919):0.13787):0.12319,RPO1_ASFB7/316-483:0.85879):0.07510,Q98RN1_GUITH/314-480:0.36205):0.27592,Q9AW39_GUITH/417-601:0.56417):0.69052,Q9AIH0_CARRU/318-460:0.30955):0.21483,O21238_RECAM/354-506:0.44420):0.27676,RPOC_THEMA/635-779:0.21585):0.05930,((RPOC_BORBU/333-475:0.14472,RPOC_TREPA/333-475:0.13163):0.09762,RPOC_AQUAE/474-616:0.16035):0.03192):0.05372,RPOC_THEAQ/620-765:0.22691):0.08114,RPOC_CHLTR/347-489:0.13532):0.20200,RPOC_MYCPU/418-560:0.18376):0.18331,RPOC_MYCGE/407-558:0.13593,RPOC_UREPA/402-553:0.13077);
RTP  (((((((((((((((Q9AXN0_9EUKA/328-493,((((O77375_PLAF7/375-540,RPB1_CAEEL/350-511),(RPB1_SCHPO/348-513,Q9HGZ5_ASPOR/357-522)),O96446_9MICR/313-476),Q9AVW8_GUITH/327-492)),RPB1_TRYBB/350-513),((((Q9VXP9_DROME/357-524,RPC1_HUMAN/358-525),RPC1_SCHPO/352-519),RPC1_YEAST/370-537),Q9LVH0_ARATH/359-525)),((Q9QTF4_RSIV/277-427,Q26008_PLAFA/731-907),(O17628_CAEEL/473-653,((RPA1_YEAST/473-653,RPA1_HUMAN/434-614),RPA1_DROME/416-591)))),RPO1_ASFB7/316-483),Q98RN1_GUITH/314-480),Q9AW39_GUITH/417-601),Q9AIH0_CARRU/318-460),O21238_RECAM/354-506),RPOC_THEMA/635-779),((RPOC_BORBU/333-475,RPOC_TREPA/333-475),RPOC_AQUAE/474-616)),RPOC_THEAQ/620-765),RPOC_CHLTR/347-489),RPOC_MYCPU/418-560),RPOC_MYCGE/407-558,RPOC_UREPA/402-553);
RTL  13.1596
LNK  O17628_CAEEL/473-653:O17628:Z83219
LNK  O21238_RECAM/354-506:O21238:AF007261
LNK  O77375_PLAF7/375-540:O77375:Z98551
LNK  O96446_9MICR/313-476:O96446:AF060234
LNK  Q18566_CAEEL/354-521:Q18566:
LNK  Q26008_PLAFA/731-907:Q26008:L11172
LNK  Q98RN1_GUITH/314-480:Q98RN1:AF165818
LNK  Q9AIH0_CARRU/318-460:Q9AIH0:AF274444
LNK  Q9AVW8_GUITH/327-492:Q9AVW8:AJ010592
LNK  Q9AW39_GUITH/417-601:Q9AW39:AJ010592
LNK  Q9AXN0_9EUKA/328-493:Q9AXN0:AF315820
LNK  Q9HGZ5_ASPOR/357-522:Q9HGZ5:AB017184
LNK  Q9LVH0_ARATH/359-525:Q9LVH0:AB019231
LNK  Q9QTF4_RSIV/277-427:Q9QTF4:AB018418
LNK  Q9VXP9_DROME/357-524:Q9VXP9:AE003500
LNK  RPA1_DROME/416-591:P91875:AE003814
LNK  RPA1_HUMAN/434-614:O95602:U33460
LNK  RPA1_YEAST/473-653:P10964:J03530
LNK  RPB1_CAEEL/350-511:P16356:M29235
LNK  RPB1_SCHPO/348-513:P36594:X56564
LNK  RPB1_TRYBB/350-513:P17545:X13492
LNK  RPC1_HUMAN/358-525:O14802:AF021351
LNK  RPC1_SCHPO/352-519:O94666:AL035570
LNK  RPC1_YEAST/370-537:P04051:X03129
LNK  RPO1_ASFB7/316-483:P42486:Z21489
LNK  RPOC_AQUAE/474-616:O67763:AE000764
LNK  RPOC_BORBU/333-475:O51349:AE001144
LNK  RPOC_CHLTR/347-489:O84316:AE001304
LNK  RPOC_MYCGE/407-558:P47582:U39715
LNK  RPOC_MYCPU/418-560:Q98Q24:AL445565
LNK  RPOC_THEAQ/620-765:Q9KWU6:Y19223
LNK  RPOC_THEMA/635-779:P36252:X72695
LNK  RPOC_TREPA/333-475:O83270:AE001205
LNK  RPOC_UREPA/402-553:Q9PQV5:AE002118
LNK  RPOC_XYLFA/344-486:Q9PA87:
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.x.....xxxxxxxxxx.x.xx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxx...xxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  RPB1_CAEEL/350-511
ASQ  GKRVDFSARTVITADPNLPIDTVGVPRTIAQNLTFPEIVTPFNVDKLQELVNRGDTQYPGAK-----ENGARVDLRYHPR.A.....ADLHLQPGY-.-.--.....--RVERHMKDGDIIVFNRQPTLHKMSMMGHRVKILPW-..STFRMNLSVTSPYNADFDGDEMNLHLPQSLETRAEIEEIAMV
DSQ  GGAAAACGTGTGGATTTCTCTGCGCGTACCGTCATCACAGCCGATCCGAACCTGCCGATTGATACGGTCGGTGTGCCGAGAACTATTGCGCAGAATCTTACGTTCCCGGAAATTGTGACACCTTTTAATGTGGATAAGCTGCAGGAGTTGGTCAATCGTGGTGATACACAGTATCCTGGTGCCAAA---------------GAAAACGGAGCTCGAGTGGATCTTCGCTACCATCCGCGT...GCC...............GCCGATCTTCACCTCCAACCGGGATAC---...---...------...............------CGTGTCGAACGTCACATGAAAGATGGCGATATAATCGTCTTTAATCGTCAACCGACTCTCCACAAAATGTCAATGATGGGACATCGTGTCAAAATCCTCCCATGG---......AGTACATTCCGAATGAATTTGTCTGTCACATCACCGTACAATGCGGATTTCGATGGAGATGAGATGAATCTTCATTTGCCACAAAGTTTGGAGACCCGAGCCGAGATTGAGGAGATCGCTATGGTG
TRN  10010101100011001
NAM  Q9HGZ5_ASPOR/357-522
ASQ  GKRVDFSARTVITGDPNLSLDEVGVPKSIARTLTYPEVVTPYNIDKLQQLVSNGPNEHPGARYI-VRDNGERIDLRHAKR.A.....GGQQLLYGW-.-.--.....--KVERHVMDGDVILFNRQPSLHKESMMGHRVRVMPY-..STFRLNLSVTTPYNADFDGDEMNLHVPQSEESRAELLQLALV
DSQ  GGTAAGCGTGTGGATTTCTCAGCTCGTACTGTCATTACAGGTGATCCCAATCTGTCTCTTGACGAGGTTGGTGTGCCAAAAAGTATCGCAAGGACTTTGACATACCCCGAAGTTGTTACGCCATACAACATCGACAAATTGCAGCAGCTCGTCTCGAATGGTCCTAACGAGCACCCTGGAGCAAGGTATATC---GTGAGAGATAACGGTGAACGTATTGACCTGCGCCATGCTAAACGA...GCC...............GGAGGCCAACAACTACTGTACGGATGG---...---...------...............------AAGGTAGAGCGTCATGTCATGGATGGTGATGTGATTCTTTTCAATCGACAGCCCTCACTTCATAAGGAATCTATGATGGGTCACCGTGTTCGCGTTATGCCGTAC---......TCTACATTCAGGCTCAACTTGTCTGTGACTACTCCTTACAACGCCGATTTTGACGGCGATGAGATGAACTTGCATGTTCCTCAAAGTGAGGAGTCTCGCGCAGAACTACTCCAGCTTGCTCTGGTT
TRN  10010101100011001
NAM  RPB1_SCHPO/348-513
ASQ  GKRVDFSARTVITGDPNLSLDELGVPRSIAKTLTYPETVTPYNIYQLQELVRNGPDEHPGAKYI-IRDTGERIDLRYHKR.A.....GDIPLRYGW-.-.--.....--RVERHIRDGDVVIFNRQPSLHKMSMMGHRIRVMPY-..STFRLNLSVTSPYNADFDGDEMNMHVPQSEETRAEIQEITMV
DSQ  GGTAAACGGGTTGATTTTTCAGCTCGTACTGTGATTACCGGTGATCCAAATTTGTCGTTAGATGAACTCGGTGTTCCACGTAGTATTGCTAAGACACTTACTTATCCTGAAACTGTTACACCTTATAATATTTATCAATTGCAAGAATTAGTACGAAATGGTCCTGATGAGCATCCCGGTGCTAAATATATC---ATTCGTGATACAGGAGAGCGTATTGACTTGCGTTATCATAAACGT...GCT...............GGTGATATTCCTCTTAGGTACGGTTGG---...---...------...............------CGAGTTGAGCGGCATATTCGTGATGGCGATGTCGTTATTTTTAACAGACAGCCATCCCTTCACAAAATGAGTATGATGGGTCATAGGATTCGCGTAATGCCGTAC---......TCGACATTCCGATTAAACTTGTCAGTTACGTCTCCTTATAATGCTGACTTTGATGGTGATGAAATGAATATGCATGTCCCTCAGTCAGAAGAAACTCGTGCAGAAATTCAGGAAATTACTATGGTA
TRN  10010101110011000
NAM  O77375_PLAF7/375-540
ASQ  GKRVDFSARTVITGDPNLNIDYIGVPKSVAMTLTFCETVTPLNYDNLKKLVERGPYEWPGAKYI-IRDNGTKYDLRHVRR.N.....SEKELEYGY-.-.--.....--KVERHMTDEDYILFNRQPSLHKMSIMGHKAKILPY-..STFRLNLSVTSPYNADFDGDEMNLHLAQSHETRSEIKHLMIV
DSQ  GGTAAAAGAGTGGACTTTTCAGCAAGAACAGTTATTACAGGAGATCCAAATTTAAATATTGATTATATAGGTGTTCCTAAATCGGTAGCTATGACATTAACATTTTGTGAGACAGTAACACCTTTAAATTATGATAATTTAAAGAAGCTTGTAGAAAGGGGTCCATATGAATGGCCTGGAGCAAAATATATT---ATTAGAGATAATGGTACAAAATATGATTTAAGACATGTACGAAGA...AAT...............TCAGAGAAAGAATTAGAGTATGGATAT---...---...------...............------AAAGTAGAAAGACATATGACCGATGAAGATTATATTTTATTTAACAGACAGCCTTCATTACATAAAATGAGTATTATGGGTCATAAGGCCAAAATATTACCTTAT---......TCAACATTTCGTTTAAATTTATCAGTCACTTCACCGTATAATGCTGATTTTGATGGAGACGAAATGAACTTACATTTAGCTCAGTCACATGAAACAAGATCTGAGATTAAACATTTAATGATAGTA
TRN  10010101110011000
NAM  Q9AXN0_9EUKA/328-493
ASQ  GKRVDFSGRTVISPDPNLRLDQVGVPQTIAMNLTYPEVVTPFNVEKMRRLVMNGPNEYPGAKYI-ERLDGSKVNLAFVKN.R.....SDIHLNNGE-.-.--.....--KVIRHLLDGDYVIFNRQPSLHKMSIMGHRVKVMRY-..SSFRLNLSCTSPYNADFDGDEMNLHVPQSPQARAEVMQLMMV
DSQ  GGCAAACGTGTCGATTTTTCGGGACGCACTGTTATCTCTCCCGACCCAAACCTGCGTCTCGACCAAGTCGGTGTTCCGCAAACGATCGCGATGAATCTTACCTATCCTGAAGTTGTGACACCCTTTAACGTCGAAAAAATGAGGAGGTTGGTGATGAACGGCCCCAACGAGTACCCGGGCGCCAAGTACATA---GAAAGGCTCGACGGATCGAAAGTTAACCTCGCGTTTGTCAAAAAC...CGC...............TCAGATATTCACCTGAACAATGGCGAA---...---...------...............------AAAGTCATTCGTCATCTTCTTGATGGGGACTACGTTATTTTTAATCGACAGCCATCTCTTCACAAGATGAGTATTATGGGACATCGTGTAAAGGTCATGCGCTAC---......TCCAGTTTCCGTCTCAACTTGTCCTGTACCTCCCCGTATAACGCGGACTTTGACGGAGACGAGATGAATCTTCATGTCCCGCAGAGTCCCCAAGCAAGGGCAGAAGTCATGCAGCTTATGATGGTC
TRN  10010101100011001
NAM  O96446_9MICR/313-476
ASQ  GKRVDFSARSVITPDPNISVEEVGVPSEIAKIHTFPEIITPFNIDRLTKLVSNGPNEYPGANYV-IRNDGQRIDLNFNR-.-.....GDIKLEEGY-.-.--.....--VVERHMQDGDVVLFNRQPSLHKMSMMAHFVRVMEG-..KTFRLNLSCVSPYNADFDGDEMNLHMPQSYNSKAELEELCLV
DSQ  GGAAAAAGGGTAGATTTCAGTGCCAGGTCTGTAATTACGCCTGATCCGAATATTTCTGTAGAAGAAGTCGGAGTTCCTTCAGAGATTGCGAAGATCCACACTTTCCCAGAAATTATAACTCCTTTTAATATTGACCGCCTTACTAAACTTGTCTCAAATGGGCCAAATGAGTACCCCGGGGCGAATTATGTA---ATAAGAAATGACGGACAAAGAATAGACTTAAATTTCAATAGG---...---...............GGAGATATTAAGTTAGAAGAAGGTTAT---...---...------...............------GTAGTCGAGAGACACATGCAAGACGGAGATGTAGTTTTATTTAATAGACAACCTTCTTTACACAAAATGAGCATGATGGCTCATTTTGTCCGAGTCATGGAAGGC---......AAAACTTTTAGACTAAATTTGTCTTGTGTCTCGCCCTATAACGCGGATTTTGACGGGGACGAAATGAATCTTCACATGCCGCAAAGTTACAACAGTAAGGCGGAATTAGAAGAATTATGTTTAGTA
TRN  10010101110011000
NAM  Q9AVW8_GUITH/327-492
ASQ  GKRVDFSARTVITPDPNIKLDELGVPLSIAMNLTFPEIVTSFNIEYMKFLLYNGPYKHPGAKYL-IRNDNNRIDLRYVKY.L.....SNINLENGY-.-.--.....--CVERHLQNGDLVLFNRQPSLHKMSMMGHIVKVMKF-..STFRLNLSATSPYNADFDGDEMNLHFPQNVESKSELKNLLMV
DSQ  GGTAAGAGAGTTGATTTTTCAGCAAGAACTGTTATCACACCTGATCCGAATATTAAATTGGACGAACTGGGAGTACCACTATCAATTGCAATGAATCTTACCTTTCCAGAAATTGTAACTTCATTTAACATTGAATATATGAAATTTTTGCTCTATAATGGACCATATAAACATCCAGGAGCAAAATATTTG---ATAAGAAACGACAATAATAGAATAGATTTAAGATATGTAAAATAT...TTA...............TCAAATATAAACTTAGAAAATGGATAT---...---...------...............------TGTGTTGAAAGACACCTACAAAATGGAGATCTTGTTTTGTTTAATCGACAACCTTCATTACATAAAATGTCAATGATGGGGCACATTGTAAAAGTTATGAAATTT---......TCAACTTTTAGATTAAATTTATCAGCAACAAGTCCTTATAATGCAGATTTCGACGGAGATGAAATGAATTTACATTTTCCTCAAAACGTAGAATCTAAATCTGAGTTAAAAAACCTACTCATGGTT
TRN  10010101100011000
NAM  RPB1_TRYBB/350-513
ASQ  GKRVDFSARTVITGDPNIDVDEVGVPFSVAMTLTFPERVNTINKKRLTEFARR--TVYPSANYI-HHPNGTITKLALLRD.R.....SKVTLNIGD-.-.--.....--VVERHVINGDVVLFNRQPTLHRMSMMGHRVRVLNY-..NTFRLNLSCTTPYNADFDGDEMNLHVPQSLLTKAELIEMMMV
DSQ  GGGAAGCGGGTGGACTTCTCCGCTCGAACCGTCATCACAGGTGATCCGAACATTGACGTGGATGAAGTAGGTGTACCCTTTTCTGTCGCGATGACGCTTACATTCCCCGAGCGAGTGAACACAATAAATAAGAAGCGACTGACGGAGTTTGCCCGGCGC------ACGGTCTATCCGTCGGCGAATTACATA---CACCATCCGAATGGCACCATAACAAAACTCGCACTCTTGCGTGAC...CGC...............TCCAAGGTGACGCTAAACATCGGTGAC---...---...------...............------GTTGTGGAGAGGCATGTGATTAATGGGGATGTCGTCTTGTTCAACCGGCAGCCGACATTGCATCGCATGAGTATGATGGGCCACAGGGTTCGGGTTCTCAACTAT---......AACACTTTCCGGCTTAATCTCTCTTGTACCACACCATACAATGCTGACTTCGATGGTGACGAAATGAATTTGCACGTGCCGCAGAGTCTCTTAACGAAAGCAGAGCTGATTGAAATGATGATGGTT
TRN  10010101100011010
NAM  Q9LVH0_ARATH/359-525
ASQ  GKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVRYPD-GSSRTLVGDYRkR.....IADELAIGC-.-.--.....--IVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPW-..RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGV
DSQ  GGGAAGCGTGTCGAGTTCACTGGTAGAACTGTAATTTCACCTGATCCCAATCTGAAAATTACAGAGGTAGGAATTCCAATCCTTATGGCTCAGATCCTAACTTTTCCTGAATGTGTTTCTCGTCATAATATTGAGAAGTTGAGGCAATGTGTCCGTAATGGCCCTAATAAATACCCTGGTGCCAGAAATGTCAGATATCCAGAT---GGTTCTTCAAGGACTTTGGTTGGTGATTATCGCaagCGT...............ATTGCTGATGAACTGGCCATTGGCTGC---...---...------...............------ATAGTTGACCGCCATTTGCAAGAAGGAGATGTTGTTCTTTTTAACAGGCAACCGAGTCTGCATCGGATGTCTATCATGTGTCACAGGGCAAGAATAATGCCTTGG---......AGAACGTTGAGGTTCAACGAATCGGTTTGTAACCCATATAATGCTGATTTTGATGGTGATGAGATGAACATGCACGTACCACAAACAGAGGAGGCTCGGACAGAGGCTATTACATTGATGGGGGTA
TRN  10010101100011001
NAM  RPC1_YEAST/370-537
ASQ  GKRVDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGANYLLKRNEDARRNLRYGDRmK.....LAKNLQIGD-.-.--.....--VVERHLEDGDVVLFNRQPSLHRLSILSHYAKIRPW-..RTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGV
DSQ  GGTAAGCGTGTCGATTTTTCTGGTAGAACTGTTATTTCTCCGGACCCAAACTTGTCCATTGACGAGGTTGCTGTCCCAGATCGTGTTGCAAAAGTCTTGACGTATCCCGAAAAGGTAACAAGGTATAATAGACATAAATTACAAGAATTAATTGTAAATGGACCCAATGTCCATCCTGGGGCGAACTATTTACTGAAAAGAAACGAAGATGCAAGAAGAAACCTAAGATATGGTGATCGTatgAAG...............TTAGCCAAAAATTTACAAATTGGTGAT---...---...------...............------GTCGTCGAAAGACATTTAGAAGACGGTGATGTGGTCCTATTCAACCGTCAACCATCTTTGCATAGATTATCAATTTTATCGCATTATGCTAAGATTCGTCCTTGG---......AGAACCTTTAGATTAAATGAATGTGTTTGCACACCTTATAACGCTGACTTCGACGGTGACGAAATGAATTTGCATGTTCCACAAACCGAAGAGGCTCGTGCAGAAGCTATCAATTTAATGGGTGTG
TRN  10010101100011000
NAM  RPC1_SCHPO/352-519
ASQ  GKRVDFSGRTVISPDPNLRIDQVAVPYRIAKILTFPERVTTQNKKHLQDCIRNGPDVHPGANYVIDRESGFKRFLRFGNRnR.....IADDLKIGD-.-.--.....--IVERHLHDNDVVLFNRQPSLHKLSIMAHLVKVRPW-..RTLRFNECVCGPYNADFDGDEMNLHVPQTEEAKTEALELMGI
DSQ  GGAAAGCGTGTAGACTTTTCCGGCAGAACAGTTATTAGCCCGGATCCTAATTTACGAATTGATCAAGTTGCCGTTCCATATCGCATTGCTAAAATTTTGACATTTCCCGAAAGAGTCACAACTCAAAACAAGAAGCACTTACAGGATTGCATCAGAAATGGGCCCGATGTGCATCCAGGTGCAAACTATGTTATAGATCGAGAAAGCGGGTTTAAGCGCTTTTTGAGGTTTGGCAATAGAaacCGT...............ATTGCTGATGATTTGAAAATTGGTGAT---...---...------...............------ATCGTTGAGCGTCATCTACATGATAACGATGTAGTTTTGTTCAATCGTCAACCTTCACTCCATAAGTTATCAATCATGGCTCACTTGGTAAAGGTACGACCATGG---......CGTACCTTAAGATTTAATGAATGTGTATGCGGTCCCTACAATGCCGATTTTGATGGCGATGAAATGAATTTACATGTTCCTCAAACTGAGGAGGCAAAGACAGAAGCCTTGGAGTTGATGGGCATT
TRN  10010101110011000
NAM  RPC1_HUMAN/358-525
ASQ  GKRVDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHTQMKRFLKYGNReK.....MAQELKYGD-.-.--.....--IVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPH-..RTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGT
DSQ  GGAAAGAGAGTGGATTTTTCTGGCAGAACAGTCATCTCGCCCGACCCCAACCTCCGGATTGATGAGGTAGCTGTGCCAGTTCATGTGGCCAAAATTCTAACTTTTCCTGAGAAGGTAAACAAAGCAAACATCAATTTCTTGAGGAAACTGGTTCAAAACGGCCCTGAGGTTCACCCAGGAGCAAACTTCATTCAGCAGAGACATACGCAGATGAAAAGGTTTTTGAAATACGGAAATCGAgaaAAG...............ATGGCTCAAGAGCTCAAGTATGGTGAC---...---...------...............------ATCGTAGAGAGACACCTCATCGATGGAGATGTGGTGCTGTTCAATCGGCAGCCCTCGCTGCACAAATTGAGCATTATGGCTCATCTGGCCAGGGTCAAGCCCCAC---......CGGACCTTCAGATTTAATGAGTGTGTCTGTACACCCTATAATGCTGACTTTGATGGTGATGAAATGAACCTTCATCTTCCTCAAACAGAAGAAGCTAAAGCAGAGGCCCTTGTTCTGATGGGGACT
TRN  10010101100011011
NAM  Q9VXP9_DROME/357-524
ASQ  GKRVDFSGRTVISPDPNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYVQQRGSSFKKYLAYGNReK.....VAQELKCGD-.-.--.....--VVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQ-..RTFRFNECACTPYNADFDGDEMNLHLPQTEEARAEALILMGN
DSQ  GGAAAGAGAGTGGATTTCAGCGGACGCACTGTCATTTCACCAGATCCCAACTTGATGATCAACCAGGTTGGAGTACCAGTGCGCGTGGCCAAGATTCTCACATACCCCGAGCGCGTGAATCCAGCCAATATAAGGCACATGAGGGAACTGGTGCGCAACGGGCCAAGCATGCACCCGGGCGCCAACTATGTGCAGCAGCGAGGGTCGAGCTTTAAGAAGTACCTTGCCTACGGCAATCGTgagAAG...............GTGGCGCAGGAGCTGAAGTGCGGCGAC---...---...------...............------GTCGTGGAACGACATCTGCGCGACGGAGATATTGTGCTGTTTAATCGCCAGCCGTCGCTGCACAAGATGTCCATTATGTGCCATCGGGCCAAAGTGCAGCCGCAG---......AGGACATTTCGCTTTAATGAGTGTGCATGTACGCCATATAACGCCGATTTCGACGGCGATGAAATGAATCTACACTTGCCACAAACGGAGGAGGCCAGAGCCGAGGCACTCATTCTGATGGGCAAC
TRN  10010101100011001
NAM  Q18566_CAEEL/354-521
ASQ  GKRVDFSGRTVISPDPNLRIDQVGVPIHVAMTLTFPEIVNASNIEKMRQLVINGSDVHPGANYLVEKKTGNKKLLKYGKRdE.....LAKNLRMGD-.-.--.....--TIERHLDDNDVVLFNRQPSLHKISIMSHRAKVMPG-..RTFRFNECACTPYNADFDGDEMNLHLPQTYEAKAEASELMNV
NAM  Q98RN1_GUITH/314-480
ASQ  GKRVDFSARTVISPDPNLFLSQIGIPIIICKNLSFPEKLNFYNYERLKRCILRGNDRYPGVVSVITRD-NKKIFLNKSNKkN.....MMFFSKIGN-.-.--.....--SIQRHLVKNDIILFNRQPSLHRLSIMAHRIRIFKE-..KTFRLNHCVCKPYNADFDGDEMNLHVPQSETSRTEAITLLNS
DSQ  GGCAAAAGAGTTGATTTTTCTGCTAGAACTGTCATATCACCTGATCCAAATCTATTTTTATCTCAAATTGGAATTCCAATTATAATTTGCAAAAATTTATCTTTTCCTGAAAAATTGAATTTTTATAATTATGAAAGACTAAAAAGATGTATTTTAAGAGGCAATGATAGATACCCAGGAGTAGTTTCTGTCATAACTAGAGAT---AATAAAAAAATATTCTTGAATAAATCAAACAAAaaaAAT...............ATGATGTTTTTTTCCAAAATAGGAAAT---...---...------...............------TCGATACAAAGACATCTTGTTAAAAATGACATAATTCTATTTAATAGACAGCCATCTTTACATCGTCTATCTATCATGGCTCATAGAATTAGAATATTTAAAGAA---......AAAACATTCAGATTAAACCATTGTGTTTGTAAGCCCTATAATGCAGATTTTGACGGTGACGAAATGAACTTACATGTTCCTCAAAGTGAAACTTCTAGAACAGAAGCTATTACTCTTTTAAACTCG
TRN  10010101110011000
NAM  RPA1_HUMAN/434-614
ASQ  GKRVDSTARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMV-INEDGSRTALSAVDMtQr..eaVAKQLLTPATgApKPq...gTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEE..KVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACT
DSQ  GGAAAGCGAGTGGACTCGACTGCGCGCTCAGTCATCTGCCCAGACATGTACATCAACACCAACGAAATTGGAATTCCCATGGTGTTTGCCACAAAACTGACCTACCCACAGCCAGTTACCCCATGGAATGTTCAGGAACTTAGGCAAGCGGTCATCAACGGCCCTAATGTGCACCCAGGAGCCTCCATGGTC---ATCAATGAGGACGGCAGCCGCACAGCCCTGAGCGCTGTGGACATGaccCAGcga......gaggccGTGGCCAAGCAGCTTCTGACCCCAGCCACGgggGCAcctAAGCCCcag.........gggACAAAAATTGTGTGCCGGCATGTGAAGAATGGGGACATTCTGCTACTGAACCGACAGCCCACACTGCACAGACCCTCCATCCAGGCCCACCGTGCCCGCATCCTGCCTGAAGAG......AAAGTGCTGCGGCTCCACTATGCCAACTGCAAGGCCTATAATGCCGACTTTGATGGAGACGAGATGAATGCCCATTTCCCCCAGAGTGAGCTGGGCCGGGCCGAGGCCTACGTCCTGGCCTGCACT
TRN  10010101100011001
NAM  RPA1_DROME/416-591
ASQ  GKRVNYAARTVITPDPNINVDEIGIPDIFAKKLSYPVPVTEWNVTELRKMVMNGPDVHPGANYI-QDKNGFTTYIPADNAsKr..esLAKLLLS---.NpKD....gIKIVHRHVLNGDVLLLNRQPSLHKPSIMGHKARILHGE..KTFRLHYSNCKAYNADFDGDEMNAHYPQSEVARAEAYNLVNV
DSQ  GGCAAACGTGTTAATTACGCCGCTCGTACTGTCATTACGCCGGATCCCAATATAAATGTGGATGAGATTGGCATCCCAGATATTTTTGCGAAGAAACTGTCGTATCCCGTGCCCGTGACCGAATGGAATGTTACAGAGCTGCGCAAAATGGTTATGAACGGTCCGGACGTGCATCCCGGAGCGAACTATATA---CAGGACAAGAACGGATTCACCACATATATACCGGCGGACAATGCCtccAAGcgt......gagagtTTGGCCAAGCTACTTTTGTCG---------...AATcccAAGGAT............ggcATTAAGATCGTTCATCGGCATGTTCTCAATGGCGACGTCCTACTGCTTAACCGACAGCCCTCGCTGCATAAGCCATCGATTATGGGTCACAAGGCTCGCATTTTGCATGGTGAG......AAGACTTTCCGTCTACACTACTCAAACTGCAAGGCATACAACGCCGATTTTGATGGCGATGAAATGAATGCCCACTATCCGCAGAGTGAGGTGGCGAGGGCGGAAGCTTACAACCTAGTGAATGTG
TRN  10010101100011001
NAM  RPA1_YEAST/473-653
ASQ  GKRVNYAARSVISPDPNIETNEIGVPPVFAVKLTYPEPVTAYNIAELRQAVINGPDKWPGATQI-QNEDGSLVSLIGMSVeQr..kaLANQLLTPSSnVsTHt...lNKKVYRHIKNRDVVLMNRQPTLHKASMMGHKVRVLPNE..KTLRLHYANTGAYNADFDGDEMNMHFPQNENARAEALNLANT
DSQ  GGTAAGCGTGTTAACTATGCCGCTCGTTCTGTTATTTCTCCAGACCCAAATATCGAAACTAATGAAATTGGTGTCCCACCTGTTTTTGCTGTTAAATTGACTTATCCAGAACCAGTAACGGCTTATAACATAGCAGAGTTGCGTCAAGCTGTTATTAATGGCCCTGATAAATGGCCAGGTGCCACTCAAATA---CAGAACGAAGATGGTTCTTTGGTCTCTTTGATCGGTATGTCTGTAgagCAAcgt......aaggcaTTAGCTAACCAACTATTGACACCATCTTCAaacGTTtctACTCATact.........ttgAATAAAAAGGTTTACCGTCACATCAAGAACAGAGATGTTGTTTTAATGAACCGTCAACCGACCTTACATAAAGCCTCCATGATGGGTCACAAAGTTAGGGTGTTACCAAATGAA......AAGACTTTGAGATTACATTATGCTAATACAGGTGCTTATAATGCAGATTTCGATGGTGATGAAATGAACATGCATTTTCCACAAAACGAAAATGCTAGAGCAGAAGCACTAAACTTAGCTAATACT
TRN  10010101110011000
NAM  O17628_CAEEL/473-653
ASQ  GKRVNFACRSVITPDPYLDIDEIGIPDIFAKKLTFTEPVNAFNVNEMKGLLRQGPHQHPGANFF-VEPSGKKTMLGDKPEeKkrrmqMAKTLNAATTeNlRQ.....TPKVLRHMKNGDMIMMNRQPSLHKPSILGHRARVLTGQ..RALRMNYAPCKAYNADFDGDEMNGHLVQSHIAQTEVREIANV
DSQ  GGAAAACGAGTCAACTTTGCTTGTCGATCAGTCATCACTCCGGATCCCTACCTGGATATTGATGAGATCGGAATTCCGGATATTTTCGCGAAAAAGCTCACTTTCACAGAGCCAGTGAATGCTTTTAACGTGAACGAGATGAAGGGGCTTCTCCGCCAAGGCCCCCACCAGCACCCGGGAGCCAATTTCTTC---GTGGAGCCTTCCGGCAAGAAGACGATGCTCGGTGATAAGCCTGAAgagAAGaagcgtcggatgcaaATGGCCAAAACCCTCAACGCGGCGACCACAgaaAACctcCGCCAA...............ACGCCAAAAGTGTTGAGACACATGAAAAACGGCGATATGATCATGATGAATCGTCAGCCATCGCTTCACAAGCCGTCGATCCTCGGCCACCGAGCCCGTGTGCTCACCGGACAG......CGGGCTCTTCGGATGAACTACGCGCCTTGCAAGGCCTACAATGCGGATTTCGATGGAGACGAGATGAACGGACACTTGGTGCAATCACATATCGCGCAGACGGAAGTTCGCGAGATTGCGAACGTC
TRN  10010101100011001
NAM  Q26008_PLAFA/731-907
ASQ  GKRVNNCARTVISPDTFIETNQIGMPIEFAKVLTIDEYITQNNFTYIKKLIENGPNIYPGALSY-RDSNGRVFKLSHKYEdRl...kVIEKIEKLNFqTeNS.....-YILHRHARDGDVVIMNRQPTLHKFSIMAHYLKIFEKE..KVFRLNYVNCSSYNADFDGDEMNLHLLQTPLARAEATHLMNC
DSQ  GGGAAAAGAGTAAATAATTGTGCAAGAACAGTTATATCTCCAGATACATTTATTGAAACAAATCAAATAGGAATGCCTATAGAATTTGCAAAGGTGTTAACTATAGATGAATATATAACACAAAATAATTTTACTTATATAAAAAAGTTAATAGAAAATGGACCAAATATATATCCAGGTGCACTTAGCTAT---AGAGATTCAAATGGTAGAGTATTTAAACTATCACATAAATATGAAgatAGAtta.........aaaGTTATTGAAAAAATAGAAAAATTGAATTTCcaaACCgaaAATTCT...............---TATATACTTCATAGACATGCACGTGATGGAGATGTAGTAATAATGAATAGACAACCTACATTACATAAATTTTCTATTATGGCCCATTATTTGAAAATATTTGAAAAAGAA......AAAGTTTTTAGATTAAATTATGTTAATTGTAGTTCATATAATGCAGATTTTGATGGAGATGAAATGAATTTACATTTGTTACAAACACCATTAGCTAGAGCTGAAGCAACACATTTAATGAATTGT
TRN  10010101110011000
NAM  Q9QTF4_RSIV/277-427
ASQ  GKRRNYTARSVVGPESTLALDQVGVPPQVADTLTIEEPVTKYNIEHVRRMRATGHLKA------LYDVDGQVRHVVRC--.-.....----------.-.--.....GLTLHRSLRDGDVVVLNRQPTLHRNSMLGMRVKVLPG-..NTIRVNLAVTHGFNMDFDGDEGNLYLPRSLSARAEVATLMSP
DSQ  GGCAAGCGCCGTAACTACACTGCACGGTCTGTGGTAGGGCCCGAGAGCACCTTAGCACTAGATCAGGTTGGTGTGCCTCCGCAAGTGGCAGACACCTTGACCATAGAAGAGCCCGTGACCAAGTACAACATAGAACATGTGCGACGGATGCGCGCCACCGGTCACCTCAAGGCG------------------CTGTACGATGTGGATGGCCAGGTGAGGCATGTGGTGAGATGT------...---...............------------------------------...---...------...............GGTTTGACACTTCACCGCAGCTTGCGGGACGGCGACGTCGTGGTGCTCAACAGGCAGCCCACATTGCATCGCAACTCCATGCTAGGCATGCGTGTGAAGGTGCTGCCGGGC---......AACACCATACGGGTGAATCTAGCTGTCACGCACGGTTTCAACATGGATTTTGACGGGGACGAAGGCAACTTGTACTTGCCCCGCAGTCTGTCGGCACGTGCAGAAGTGGCCACCCTCATGTCACCA
TRN  10010101100011000
NAM  Q9AW39_GUITH/417-601
ASQ  GKRVLNSARSVIAPDPFLKTFEVGVPKEFAKDLYVPESINLINILKVFLDFLKIKNFKKKKL-ILEILNGNKISISQQDFlFkl.kkISISYKYFKLfSlFSknkygFNKFLRNLKKNDISILNRQPSLHKTSIMAHKVRILKSS..KCLKLHYSNCNSYNADFDGDEMNLHIPQNYLSISESLYIAYV
DSQ  GGAAAACGTGTGTTAAATTCTGCTAGGTCAGTAATAGCCCCCGATCCATTTCTTAAAACTTTTGAAGTTGGTGTTCCAAAGGAATTTGCAAAAGACTTATATGTTCCCGAATCTATAAACTTGATAAATATACTAAAAGTTTTTTTGGATTTTCTCAAAATTAAAAACTTTAAAAAGAAAAAACTT---ATTTTAGAAATATTAAATGGAAATAAAATTTCAATTTCACAACAAGATTTCttaTTCaaactt...aagaaaATATCTATATCGTATAAATATTTTAAACTAttcTCAttaTTTTCAaaaaataagtatggaTTTAATAAATTTTTGAGAAATCTAAAAAAAAACGACATTTCTATTTTAAATAGACAGCCATCTTTGCACAAAACATCTATTATGGCGCATAAAGTGAGAATTTTAAAGTCAAGT......AAATGTTTAAAATTACATTATTCAAATTGTAATTCATATAATGCTGATTTCGATGGCGATGAAATGAACTTGCATATACCTCAAAATTATCTGTCAATTTCAGAATCTCTATATATAGCATACGTT
TRN  10010101100011000
NAM  RPO1_ASFB7/316-483
ASQ  GSQVWSISRSTICGNSDLHLDEVGYPISFARTLQVAETVQHYNINRLMPYFLNGKRQYPGCSRVYKQITQSVHDIEGLKQ.-.....-DFRLEVGD-.-.--.....--ILYRDVVTGDVAFFNRQPSLERSSIGVHRIVVLENPkiSTFQMNVSACAWYNADFDGDQMNLWVPWSVMSRVEAELLCSV
DSQ  GGCAGCCAGGTATGGTCGATCAGCCGGTCCACCATCTGCGGGAACTCAGACCTTCACCTGGACGAGGTTGGCTATCCCATTTCCTTTGCACGAACGCTGCAAGTTGCGGAAACAGTGCAACATTATAATATTAATAGATTAATGCCCTATTTTTTAAATGGAAAGCGCCAGTACCCTGGTTGTTCAAGAGTGTATAAGCAAATAACACAATCCGTTCACGATATTGAGGGTCTCAAACAA...---...............---GACTTTAGGCTGGAGGTAGGAGAC---...---...------...............------ATCCTTTACCGTGATGTCGTCACTGGCGACGTCGCGTTTTTTAATCGCCAGCCTTCTCTCGAACGAAGCAGCATAGGGGTTCACCGGATTGTCGTTCTTGAAAACCCAaaaattTCTACGTTTCAAATGAATGTCAGCGCATGTGCCTGGTATAATGCGGACTTTGATGGGGATCAGATGAATCTCTGGGTTCCCTGGAGCGTCATGAGCCGCGTTGAGGCCGAACTACTTTGTTCTGTG
TRN  10010101100011000
NAM  RPOC_UREPA/402-553
ASQ  GKRVDYSGRSVIVVGPELKMYEVGIPALMILKLFRPYIISELIRKRDELGNEIQPICA--------NIKLAEQKILAQ--.-.....-DNEIW----.-.--.....--PVVEKVIKQRPVILNRAPTLHRLGIQAFEPKMVDG-..KAIRLHPLVTTAFNADFDGDQMAVHIPLSKEAVAEARSILLA
DSQ  GGAAAACGTGTTGACTATTCAGGTCGTTCTGTAATTGTTGTTGGTCCTGAATTAAAAATGTATGAAGTAGGAATTCCTGCTTTAATGATTTTAAAATTATTTAGACCATATATTATTTCTGAATTAATACGTAAACGTGATGAATTAGGTAATGAAATTCAACCAATTTGTGCC------------------------AATATTAAATTAGCAGAACAAAAAATTCTTGCGCAA------...---...............---GATAATGAGATTTGA------------...---...------...............------CCCGTTGTTGAAAAAGTTATTAAGCAACGTCCTGTAATTTTAAACCGTGCACCAACCTTACACCGTTTAGGGATCCAAGCTTTTGAACCAAAAATGGTGGACGGT---......AAAGCTATTCGTTTACATCCTCTAGTTACAACCGCTTTTAATGCGGATTTTGACGGAGACCAAATGGCTGTTCATATCCCCTTATCCAAAGAAGCAGTGGCTGAAGCACGATCAATTTTATTAGCC
TRN  00010000000000000
NAM  RPOC_MYCGE/407-558
ASQ  GKRVDYSGRSVIVVGPELKMYEVGIPALMILKLFKPFIIHGLINKFDENGNEIRPIAA--------SIRQAEDMIKNQ--.-.....-DDLIW----.-.--.....--GIVYDVIKDRPVLLNRAPTLHRLGIQAFEPRIVDG-..KAIRLHPLVTTAFNADFDGDQMAVHVPLSENAVNEARAVLLA
DSQ  GGTAAAAGAGTTGATTATTCAGGTAGAAGTGTAATTGTGGTTGGCCCTGAATTGAAGATGTATGAAGTTGGGATCCCAGCACTAATGATCTTAAAGCTGTTTAAACCCTTTATTATCCATGGATTGATCAATAAGTTTGATGAAAATGGTAATGAGATTAGACCAATTGCCGCT------------------------TCCATCAGACAAGCTGAAGATATGATTAAAAACCAG------...---...............---GATGATCTTATCTGG------------...---...------...............------GGAATAGTTTATGATGTTATCAAAGATCGTCCCGTTTTACTAAATCGTGCTCCAACCCTACATAGGTTAGGGATCCAAGCATTTGAACCAAGAATTGTTGATGGT---......AAAGCAATTAGATTACACCCATTAGTAACTACTGCATTTAATGCTGATTTTGATGGTGATCAGATGGCAGTTCATGTTCCTTTAAGTGAGAATGCAGTTAATGAAGCAAGAGCTGTTCTGCTTGCA
TRN  10010101100011000
NAM  RPOC_MYCPU/418-560
ASQ  GKRVDYSGRSVIVVGPELKMNQVGIPREMAAKLFEPWIIKELID---------QEITL--------SVKSARKLIDNL--.-.....-NPIIW----.-.--.....--PHVAKVIQGRPVLLNRAPTLHRLSIQAFEPVLIRG-..KAIKLHPLVTTAFNADFDGDQMAVHVPISDEAVREAKELLFA
DSQ  GGAAAAAGGGTTGACTATTCAGGAAGAAGTGTTATTGTTGTTGGTCCTGAATTAAAAATGAACCAAGTTGGTATTCCAAGGGAAATGGCTGCTAAATTATTTGAGCCATGAATTATTAAAGAATTAATAGAT---------------------------CAAGAAATTACCTTA------------------------AGTGTTAAAAGTGCTCGTAAATTAATTGATAATTTA------...---...............---AATCCAATTATTTGA------------...---...------...............------CCTCATGTTGCAAAAGTTATCCAAGGAAGACCTGTTCTTTTAAACCGTGCTCCTACATTGCATCGTCTTTCAATTCAAGCTTTTGAGCCAGTTTTAATTAGAGGT---......AAGGCTATTAAACTTCATCCACTTGTAACTACAGCTTTTAACGCTGACTTTGATGGTGATCAAATGGCGGTTCATGTTCCTATTAGTGATGAAGCTGTTAGAGAAGCTAAAGAATTGCTTTTTGCT
TRN  00010000000000000
NAM  RPOC_CHLTR/347-489
ASQ  GKRVDYSGRSVIIVGPELKFNQCGLPKEMALELFEPFIIKRLKDQGSVY-----------------TIRSAKKMIQRG--.-.....-APEVW----.-.--.....--DVLEEIIKGHPVLLNRAPTLHRLGIQAFEPVLIEG-..KAIRVHPLVCAAFNADFDGDQMAVHVPLSIEAQLEAKVLMMA
DSQ  GGTAAACGAGTGGATTACTCCGGACGTTCAGTGATTATTGTTGGTCCTGAATTGAAGTTTAATCAGTGCGGTTTGCCTAAGGAAATGGCTCTGGAATTGTTTGAGCCATTTATTATCAAACGATTAAAGGATCAGGGTAGTGTTTAT---------------------------------------------------ACTATTCGTTCAGCAAAGAAGATGATTCAGCGGGGG------...---...............---GCTCCAGAAGTTTGG------------...---...------...............------GATGTTCTTGAAGAAATAATTAAAGGGCATCCAGTTTTACTAAACCGAGCTCCTACTTTGCACCGATTAGGGATACAGGCTTTTGAGCCAGTATTGATTGAAGGG---......AAGGCTATTCGGGTCCATCCTCTGGTATGTGCAGCGTTCAATGCTGACTTTGATGGAGACCAAATGGCTGTTCACGTGCCTCTCTCCATCGAGGCGCAGTTAGAAGCTAAGGTTTTGATGATGGCT
TRN  10010101100011000
NAM  RPOC_TREPA/333-475
ASQ  GKRVDYSGRSVIVVGPELKLWQCGLPTKMALELFKPFIMKKLVEKEIVS-----------------NIKKAKMLVEQE--.-.....-SPKVF----.-.--.....--SVLDEVVKEHPVMLNRAPTLHRLGIQAFEPVLVEG-..KAIRLHPLVCKPFNADFDGDQMAVHVPLTQAAQMECWTLMLS
DSQ  GGCAAGCGGGTCGACTATTCCGGGCGTTCGGTTATCGTAGTGGGGCCTGAACTTAAGTTGTGGCAGTGCGGGTTGCCTACAAAAATGGCGCTTGAGCTGTTTAAGCCCTTTATTATGAAAAAGCTGGTTGAGAAAGAAATTGTCTCG---------------------------------------------------AACATCAAAAAGGCAAAGATGCTCGTGGAACAAGAG------...---...............---TCGCCGAAGGTATTT------------...---...------...............------TCGGTGTTGGATGAAGTGGTAAAAGAGCATCCAGTTATGCTTAATCGGGCGCCGACATTGCATCGATTGGGCATTCAGGCTTTTGAGCCGGTGTTGGTGGAGGGG---......AAGGCGATTCGTCTTCATCCGCTTGTGTGTAAACCTTTTAATGCTGATTTTGATGGGGATCAAATGGCGGTGCATGTGCCGCTGACGCAGGCGGCACAGATGGAGTGTTGGACGCTCATGTTGTCG
TRN  11011101101011011
NAM  RPOC_BORBU/333-475
ASQ  GKRVDYSGRSVIVVGPELKLHQCGLPAKMALELFKPFVIRRLIESEAVF-----------------NIKRAKNLIEQE--.-.....-VDEVW----.-.--.....--QILDLVIKEHPILLNRAPTLHRLGIQAFEPVLVEG-..KAIKLHPLVCHAYNADFDGDQMAVHVPLTPAAQAESWALMLS
DSQ  GGTAAAAGAGTAGATTATTCTGGTCGTTCTGTTATTGTTGTTGGACCTGAGCTTAAGCTACATCAATGTGGATTGCCTGCAAAAATGGCCCTTGAGCTTTTTAAGCCTTTTGTGATAAGAAGACTGATTGAGAGTGAAGCTGTTTTT---------------------------------------------------AATATCAAAAGAGCAAAGAATTTAATAGAGCAAGAA------...---...............---GTAGATGAGGTGTGG------------...---...------...............------CAAATTTTAGATCTTGTTATCAAAGAGCATCCTATTCTTTTAAATAGGGCACCCACTCTTCATAGACTTGGAATTCAAGCTTTTGAACCTGTGTTAGTTGAGGGT---......AAGGCAATAAAATTACATCCTCTTGTTTGTCATGCATACAATGCCGATTTTGATGGTGATCAAATGGCGGTACATGTGCCTCTTACTCCGGCAGCACAAGCTGAAAGTTGGGCTTTAATGCTTTCA
TRN  10010101100011000
NAM  RPOC_AQUAE/474-616
ASQ  GKRVDYSGRSVIVVGPELQMHQCGLPKIMALELFKPFVYRRLEEKGYAT-----------------SIKHAKRLVEQK--.-.....-TPEVW----.-.--.....--ECLEEVVKEHPVLLNRAPTLHRPSIQAFEPVLVEG-..KAIQLHPLVCPPFNADFDGDQMAVHVPLGIEAQLESYILMLS
DSQ  GGAAAGAGAGTTGACTATTCAGGACGTTCCGTTATAGTCGTCGGTCCAGAACTCCAGATGCACCAGTGCGGTCTTCCCAAGATAATGGCCCTCGAACTCTTCAAACCCTTCGTATACAGGAGACTGGAAGAAAAAGGGTATGCGACT---------------------------------------------------TCCATAAAACACGCAAAGAGACTCGTAGAGCAAAAG------...---...............---ACACCCGAAGTATGG------------...---...------...............------GAGTGCCTTGAAGAAGTGGTCAAAGAACACCCCGTTCTGCTAAACCGTGCTCCAACGCTCCACAGACCTTCAATTCAGGCTTTTGAACCCGTTCTCGTAGAAGGA---......AAAGCCATACAGCTACACCCCCTCGTTTGCCCGCCCTTTAACGCGGACTTTGACGGAGACCAAATGGCCGTACACGTCCCCCTCGGAATAGAGGCTCAGCTTGAGTCTTACATACTTATGCTCTCC
TRN  10010101100011001
NAM  RPOC_XYLFA/344-486
ASQ  GKRVDYSARSVIIVGPNLRLHQCGLPKKMALELFKPFVFAKLQRRGLAT-----------------TIKAAKKLVERE--.-.....-EAEVW----.-.--.....--DILEEVISEHPVVLNRAPTLHRQGIQAFEPVLIEG-..KAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARALMMS
NAM  RPOC_THEAQ/620-765
ASQ  GKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLKKMEEKAFAP-----------------NVKAARRMLERQRD.-.....IKDEVW----.-.--.....--DALEEVIHGKVVLLNRAPTLHRLGIQAFQPVLVEG-..QSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLS
DSQ  GGCAAACGGGTGGACTACTCGGGCCGGAGCGTGATCGTGGTGGGGCCCCAGCTCAAGCTCCACCAGTGCGGCCTGCCCAAGCGCATGGCCCTGGAGCTCTTCAAGCCCTTCCTCCTCAAGAAGATGGAGGAGAAGGCATTCGCCCCC---------------------------------------------------AACGTGAAGGCGGCCAGGCGCATGCTGGAGCGCCAGCGGGAC...---...............ATCAAGGACGAGGTGTGG------------...---...------...............------GACGCCCTCGAGGAGGTCATCCACGGCAAGGTGGTCCTCCTGAACCGGGCCCCTACCCTGCATCGCCTGGGGATCCAGGCCTTCCAGCCCGTTTTGGTGGAGGGG---......CAGTCCATCCAGCTCCACCCCCTGGTCTGCGAGGCCTTCAACGCCGACTTTGACGGGGACCAGATGGCCGTCCACGTCCCCCTTTCCTCCTTCGCCCAGGCCGAGGCCCGGATCCAGATGCTCTCC
TRN  10010101100011011
NAM  RPOC_THEMA/635-779
ASQ  GKRVDYSGRAVIVVGPNLKIHQCGIPKKMAMELFKPFVLAKLLGEGSSSK----------------TMRKVKKAIIEK--.-.....EMPEAW----.-.--.....--EVLEEVIKGSVVLLNRAPTLHRMSIQAFEPKLVEG-..NAIQLHPVVCPPFNADFDGDQMAVHVPLSAAAQAEARFLMLS
DSQ  GGAAAGCGTGTGGATTACTCTGGAAGAGCGGTTATTGTCGTGGGCCCAAATCTGAAGATACACCAGTGCGGTATTCCAAAGAAAATGGCAATGGAGCTCTTCAAACCGTTTGTTCTGGCGAAACTCCTTGGAGAGGGTTCTTCCAGCAAA------------------------------------------------ACCATGAGAAAGGTCAAGAAAGCGATCATAGAAAAA------...---...............GAGATGCCGGAAGCCTGG------------...---...------...............------GAAGTGCTTGAAGAAGTGATAAAGGGAAGCGTCGTTCTTTTGAACAGAGCTCCCACACTCCACAGGATGTCAATTCAGGCGTTTGAACCAAAACTCGTTGAAGGA---......AACGCCATACAGCTCCATCCTGTCGTGTGTCCACCATTCAACGCGGATTTTGACGGTGACCAGATGGCGGTTCATGTACCGCTTTCGGCCGCGGCGCAGGCAGAGGCAAGATTTCTCATGCTTTCG
TRN  10010101100011001
NAM  Q9AIH0_CARRU/318-460
ASQ  GKRVDFSGRSVITVEPNLFLYECKIPIYIALELFKPILYYELKKKKIITTIS-FIDDY--------YKKNKKQIIL----.-.....----------.-.--.....---LLKNKVKSYFIMLNRAPTLHRMNFQSFKILLTED-..KTIKIHPLVCLSYNADFDGDQMAIHLPLTNNAKVESNYLLLS
DSQ  GGTAAGAGAGTTGATTTTTCAGGAAGATCAGTAATTACTGTTGAACCAAATTTGTTTTTATATGAATGTAAAATTCCAATTTATATAGCATTAGAATTATTTAAACCAATTTTATATTATGAACTAAAAAAAAAAAAAATAATTACTACTATAAGT---TTCATAGATGATTAT------------------------TATAAAAAAAATAAAAAACAAATAATTTTA------------...---...............------------------------------...---...------...............---------TTATTAAAAAATAAAGTTAAAAGTTATTTCATAATGCTAAATAGAGCACCTACTTTGCATAGAATGAATTTTCAATCTTTTAAAATTTTATTAACTGAAGAT---......AAAACTATTAAAATACATCCACTTGTTTGTTTAAGTTATAATGCAGATTTTGATGGAGATCAAATGGCAATACATTTACCACTAACAAATAATGCAAAAGTAGAATCTAATTATTTATTATTATCA
TRN  10010101110011000
NAM  O21238_RECAM/354-506
ASQ  GKRINFSGRTVITSGPRLHLNQCGLPIELVLELFKPFIILKMRDLNICSQTS-LKNLK--------TYDDFKQILFNKF-.-.....TINLVF----.-.--.....--KLINSIISKHPVLLNRAPTLHRMNIQTFSPLLIYT-..KAIQLHPLVCSSFNADFDGDTMAIYIPHTLRSQIESRVLMMS
DSQ  GGTAAACGAATAAATTTTTCTGGTAGAACTGTTATAACATCAGGACCTAGATTACATCTAAATCAATGTGGATTACCTATTGAATTAGTATTGGAATTATTTAAACCATTTATTATTTTAAAAATGCGTGACTTAAATATTTGTTCACAAACATCT---TTAAAAAATTTAAAA------------------------ACGTATGATGATTTTAAACAAATACTATTTAATAAATTT---...---...............ACAATTAATTTAGTTTTT------------...---...------...............------AAATTAATTAATAGTATTATAAGTAAACATCCAGTATTGTTGAATAGAGCTCCAACACTACATAGAATGAATATACAGACATTTTCTCCGTTATTAATTTATACA---......AAAGCAATACAATTACATCCACTAGTTTGTTCTTCTTTTAATGCTGATTTTGATGGTGATACAATGGCTATATATATACCACATACATTGAGATCGCAGATAGAATCTAGAGTTTTAATGATGTCT
TRN  10010101110011000
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