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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF00541 - Adeno_knob)
FAM  PF00541
PID  Adeno_knob
DES  Adenoviral fibre protein (knob domain)
IPR  IPR000978
ANO  9
ALN  255
AID  0.331827
APH  ((((FIBP_ADE12/410-587:0.20481,(FIB1_ADE40/373-547:0.75327,FIB2_ADE40/233-387:0.70568):0.22196):0.34953,(FIBP_ADE02/401-582:0.28184,(FIBP_ADE08/182-362:0.30291,FIBP_ADE15/182-367:0.27911):0.33971):0.17876):0.13887,FIBP_ADEM1/388-612:1.42683):0.67840,FIBP_ADE03/133-318:0.43714,FIBP_ADE07/152-342:0.34301);
ATP  ((((FIBP_ADE12/410-587,(FIB1_ADE40/373-547,FIB2_ADE40/233-387)),(FIBP_ADE02/401-582,(FIBP_ADE08/182-362,FIBP_ADE15/182-367))),FIBP_ADEM1/388-612),FIBP_ADE03/133-318,FIBP_ADE07/152-342);
ATL  6.64185
DNO  8
DLN  765
DID  0.459177
DPH  ((((FIBP_ADE15/182-367:0.24731,FIBP_ADE08/182-362:0.18416):0.23300,FIBP_ADE02/401-582:0.25746):0.08199,(FIBP_ADE12/410-587:0.26538,(FIB2_ADE40/233-387:0.48684,FIB1_ADE40/373-547:0.44753):0.15271):0.19057):0.16896,FIBP_ADE03/133-318:0.47142,FIBP_ADEM1/388-612:0.74798);
DTP  ((((FIBP_ADE15/182-367,FIBP_ADE08/182-362),FIBP_ADE02/401-582),(FIBP_ADE12/410-587,(FIB2_ADE40/233-387,FIB1_ADE40/373-547))),FIBP_ADE03/133-318,FIBP_ADEM1/388-612);
DTL  3.93531
RID  0.334962
RPH  ((((FIBP_ADE15/182-367:0.28041,FIBP_ADE08/182-362:0.30072):0.33567,FIBP_ADE02/401-582:0.28492):0.19646,(FIBP_ADE12/410-587:0.20531,(FIB2_ADE40/233-387:0.70468,FIB1_ADE40/373-547:0.74908):0.21844):0.33312):0.30593,FIBP_ADE03/133-318:0.93662,FIBP_ADEM1/388-612:1.21318);
RTP  ((((FIBP_ADE15/182-367,FIBP_ADE08/182-362),FIBP_ADE02/401-582),(FIBP_ADE12/410-587,(FIB2_ADE40/233-387,FIB1_ADE40/373-547))),FIBP_ADE03/133-318,FIBP_ADEM1/388-612);
RTL  6.06454
LNK  FIB1_ADE40/373-547:P18047:M28822
LNK  FIB2_ADE40/233-387:P18048:L19443
LNK  FIBP_ADE02/401-582:P03275:J01917
LNK  FIBP_ADE03/133-318:P04501:X01998
LNK  FIBP_ADE07/152-342:P15141:
LNK  FIBP_ADE08/182-362:P36845:X74660
LNK  FIBP_ADE12/410-587:P36711:X73487
LNK  FIBP_ADE15/182-367:P36847:X72935
LNK  FIBP_ADEM1/388-612:P19721:M30594
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  FIBP_ADEM1/388-612
ASQ  LWT-GLPIGNNGTFHTKQ---DCKIFLSLTRLGPMVHGTFMLQAPQYELTTNGMREITFSFNSTGGLEQPAPVTYWGALDPPPTAKAAEIENQKRVKKRAAPDPPVEPPPKRRGDLAVLFAKVAEQAMELAKEQAVQAQPPEHVNTDWADHMNLLRFMPNTLVYP.------TAATIAANLQFHDTRL-----SLRRATLKIRLNGSPD----.--SAYQLGFMLELVGTQS-------ASIVTDTISFWYYAED
DSQ  CTGTGGACA---GGCCTTCCCATTGGGAATAATGGCACTTTTCACACCAAACAA---------GACTGCAAAATTTTTTTAAGTCTGACTCGCTTGGGGCCCATGGTTCACGGAACATTTATGCTGCAAGCTCCACAGTATGAACTAACAACCAACGGCATGAGAGAAATTACTTTTAGTTTTAACTCCACTGGAGGACTAGAACAACCCGCTCCCGTAACATACTGGGGTGCCCTAGATCCTCCCCCCACAGCTAAAGCAGCTGAAATAGAAAACCAGAAGCGCGTGAAAAAACGCGCTGCTCCCGATCCCCCCGTAGAACCACCGCCCAAACGACGAGGAGATCTAGCAGTTCTCTTTGCAAAAGTTGCAGAGCAGGCAATGGAGCTTGCCAAAGAGCAGGCAGTTCAGGCCCAACCCCCAGAACATGTTAACACTGATTGGGCCGACCACATGAACCTGCTGCGTTTCATGCCCAATACCTTGGTGTACCCC...------------------ACCGCGGCCACAATTGCTGCTAATCTTCAATTCCATGATACCCGCCTA---------------AGTCTTAGAAGGGCAACCCTCAAAATAAGACTGAATGGCAGTCCAGAC------------...------TCTGCCTACCAACTGGGGTTTATGCTGGAATTGGTTGGAACCCAATCT---------------------GCATCTATTGTTACTGACACTATAAGTTTTTGGTACTATGCTGAAGAC
TRN  10010101100011010
NAM  FIBP_ADE15/182-367
ASQ  LWTTPDPS-PNCKIIEDK---DSKLTLILTKCGSQILGSVSLLV-----VKGKFSNINNTTNPNE---ADKQITVKLLFDANGVLKQGST--------------------------------MDSSYWNYRSDNSNLS----------QPYKKAVGFMPSKTAYPkQTKPTNKEISQAKNKIVSNVYLGG--KIDQPCVIIISFNEEAD----.--SDYSIVFYFKWYKTYEN------VQFDSSSFNFSYIAQE
DSQ  TTATGGACAACTCCAGATCCATCT---CCAAATTGCAAGATAATTGAGGATAAA---------GACTCAAAACTAACTTTAATTCTCACAAAGTGTGGAAGTCAGATTCTAGGAAGCGTGTCTTTGTTGGTA---------------GTCAAGGGAAAATTCAGTAATATAAATAATACCACAAATCCAAATGAA---------GCTGATAAACAAATCACAGTTAAGTTGTTGTTTGATGCAAACGGAGTTCTTAAACAGGGCTCTACT------------------------------------------------------------------------------------------------ATGGATTCTTCATATTGGAATTATAGAAGTGATAATTCCAATTTATCC------------------------------CAACCATACAAAAAAGCAGTTGGATTCATGCCTAGTAAGACTGCTTATCCTaaaCAAACCAAACCAACCAACAAAGAAATAAGTCAGGCAAAAAATAAAATTGTAAGCAATGTGTATCTTGGAGGT------AAAATTGATCAACCATGTGTTATTATAATTTCTTTTAATGAAGAAGCTGAC------------...------AGTGACTATTCTATTGTGTTTTACTTTAAATGGTACAAAACTTATGAAAAT------------------GTTCAGTTTGACTCTTCATCCTTTAACTTCTCCTACATCGCCCAAGAA
TRN  10010101110011000
NAM  FIBP_ADE08/182-362
ASQ  LWTTPDTS-PNCRIDQDK---DSKLSLVLTKCGSQILANVSLIV-----VAGRYKIINNNTNP-----ALKGFTIKLLFDKNGVLMESSN--------------------------------LGKSYWNFRNQNSIMS----------TAYEKAIGFMPNLVAYP.--KPTTGSKKYARDIVYGNIYLGG--KPHQPVTIKTTFNQETG----.--CEYSITFDFSWAKTYVN------VEFETTSFTFSYIAQE
DSQ  CTATGGACAACTCCAGACACATCT---CCAAATTGCAGAATTGATCAGGATAAG---------GACTCTAAGCTAAGTTTGGTCCTTACAAAGTGTGGAAGTCAAATATTAGCCAATGTGTCATTAATTGTT---------------GTAGCTGGAAGGTACAAAATTATCAATAACAATACTAATCCA---------------GCTCTTAAAGGATTTACCATTAAATTGTTGTTTGATAAAAATGGAGTCCTTATGGAATCTTCAAAT------------------------------------------------------------------------------------------------CTTGGTAAATCATATTGGAACTTTCGAAATCAAAATTCAATTATGTCA------------------------------ACAGCTTATGAAAAAGCTATTGGTTTTATGCCTAATTTGGTAGCCTATCCA...------AAACCTACCACTGGCTCTAAAAAATATGCAAGAGATATAGTTTATGGAAACATCTACCTTGGCGGA------AAGCCACATCAACCAGTAACCATTAAAACTACCTTTAACCAGGAAACTGGA------------...------TGTGAATACTCTATTACATTTGATTTTAGTTGGGCCAAAACTTATGTAAAT------------------GTTGAATTTGAAACTACCTCTTTTACCTTTTCCTATATTGCCCAAGAA
TRN  10010101110011000
NAM  FIBP_ADE02/401-582
ASQ  LWTTPDPS-PNCRIHSDN---DCKFTLVLTKCGSQVLATVAALA-----VSGDLSSMTGTVAS---------VSIFLRFDQNGVLMENSS--------------------------------LKKHYWNFRNGNSTNA----------NPYTNAVGFMPNLLAYP.-----KTQSQTAKNNIVSQVYLHG--DKTKPMILTITLNGTSESTETsEVSTYSMSFTWSWESGKYTT-----ETFATNSYTFSYIAQE
DSQ  CTGTGGACAACCCCAGACCCATCT---CCTAACTGCAGAATTCATTCAGATAAT---------GACTGCAAATTTACTTTGGTTCTTACAAAATGTGGGAGTCAAGTACTAGCTACTGTAGCTGCTTTGGCT---------------GTATCTGGAGATCTTTCATCCATGACAGGCACCGTTGCAAGT---------------------------GTTAGTATATTCCTTAGATTTGACCAAAACGGTGTTCTAATGGAGAACTCCTCA------------------------------------------------------------------------------------------------CTTAAAAAACATTACTGGAACTTTAGAAATGGGAACTCAACTAATGCA------------------------------AATCCATACACAAATGCAGTTGGATTTATGCCTAACCTTCTAGCCTATCCA...---------------AAAACCCAAAGTCAAACTGCTAAAAATAACATTGTCAGTCAAGTTTACTTGCATGGT------GATAAAACTAAACCTATGATACTTACCATTACACTTAATGGCACTAGTGAATCCACAGAAACTagcGAGGTAAGCACTTACTCTATGTCTTTTACATGGTCCTGGGAAAGTGGAAAATACACCACT---------------GAAACTTTTGCTACCAACTCTTACACCTTCTCCTACATTGCCCAGGAA
TRN  10010101100011001
NAM  FIBP_ADE12/410-587
ASQ  LWTTPDPP-PNCSLIQEL---DAKLTLCLTKNGSIVNGIVSLVG-----VKGNLLNIQSTTTT---------VGVHLVFDEQGRLITSTPTA-----------------------------LVPQASWGYRQGQSVST----------NTVTNGLGFMPNVSAYP.-----RPNASEAKSQMVSLTYLQG--DTSKPITMKVAFNGITSL---.--NGYSLTFMWSGLSNYIN------QPFSTPSCSFSYITQE
DSQ  CTGTGGACAACTCCTGACCCACCA---CCAAACTGCAGCCTCATACAAGAGCTA---------GATGCAAAACTCACCCTGTGCTTAACAAAAAACGGATCTATTGTTAATGGCATTGTAAGTTTAGTGGGT---------------GTTAAGGGTAATCTCCTAAATATCCAAAGTACTACTACCACT---------------------------GTAGGAGTGCATTTAGTGTTTGATGAACAGGGAAGATTAATCACATCAACCCCTACTGCC---------------------------------------------------------------------------------------CTGGTTCCCCAAGCTTCGTGGGGATATAGACAAGGCCAATCAGTGTCTACC------------------------------AATACTGTTACCAATGGTCTAGGTTTTATGCCTAATGTGAGTGCTTACCCT...---------------AGACCAAATGCCAGTGAGGCTAAAAGCCAAATGGTAAGTCTCACGTACTTACAGGGA------GATACATCTAAACCTATAACAATGAAAGTTGCATTTAATGGCATTACGTCGCTA---------...------AATGGATACTCTTTAACATTCATGTGGTCAGGTCTATCAAACTATATAAAT------------------CAGCCTTTCTCTACACCATCCTGCTCCTTTTCTTACATTACCCAAGAA
TRN  10010101100011000
NAM  FIBP_ADE07/152-342
ASQ  LWTGVNPTTANCQIMASSESNDCKLILTLVKTGGLVTAFVYVIG-----VSNDFNMLTTHKNIN--------FTAELFFDSTGNLLTSLS--------------------------------SLKTPLNHKSGQNMAT----------GALTNAKGFMPSTTAYP.----FNVNSREKENYIYGTCYYTASDHTAFPIDISVMLNQRALNNE-.--TSYCIRVTWSWNTGVAPEVQTSATTLVTSPFTFYYIRED
NAM  FIBP_ADE03/133-318
ASQ  LWTGPKPE-ANCIIEYGKQNPDSKLTLILVKNGGIVNGYVTLMG-----ASDYVNTLFKNKNVS--------INVELYFDATGHILPDSS--------------------------------SLKTDLELKYKQ--------------TADFSARGFMPSTTAYP.--FVLPNAGTHNENYIFGQCYYKASDGALFPLEVTVMLNKRLPDSR-.--TSYVMTFLWSLNAGLAPE--TTQATLITSPFTFSYIRED
DSQ  TTATGGACAGGTCCAAAACCAGAA---GCCAACTGCATAATTGAATACGGGAAACAAAACCCAGATAGCAAACTAACTTTAATCCTTGTAAAAAATGGAGGAATTGTTAATGGATATGTAACGCTAATGGGA---------------GCCTCAGACTACGTTAACACCTTATTTAAAAACAAAAATGTCTCC------------------------ATTAATGTAGAACTATACTTTGATGCCACTGGTCATATATTACCAGACTCATCT------------------------------------------------------------------------------------------------TCTCTTAAAACAGATCTAGAACTAAAATACAAGCAA------------------------------------------ACCGCTGACTTTAGTGCAAGAGGTTTTATGCCAAGTACTACAGCGTATCCA...------TTTGTCCTTCCTAATGCGGGAACACATAATGAAAATTATATTTTTGGTCAATGCTACTACAAAGCAAGCGATGGTGCCCTTTTTCCGTTGGAAGTTACTGTTATGCTTAATAAACGCCTGCCAGATAGTCGC---...------ACATCCTATGTTATGACTTTTTTATGGTCCTTGAATGCTGGTCTAGCTCCAGAA------ACTACTCAGGCAACCCTCATAACCTCCCCATTTACCTTTTCCTATATTAGAGAAGAT
TRN  10010101100011000
NAM  FIB2_ADE40/233-387
ASQ  IWS-ISPT-PNCSIYETQ---DANLFLCLTKNGAHVLGTITIKG-----LKGALREMNDNA-----------LSVKLPFDNQGNLLNCAL---------------------------------ESSTWRYQETN--------------AVASNALTFMPNSTVYP.-----RNKTADPGNMLIQ---------ISPNITFSVVYNEIN-----.--SGYAFTFKWSAEPG---------KPFHPPTAVFCYITEQ
DSQ  ATTTGGTCT---ATCTCGCCTACG---CCTAACTGCTCCATCTATGAAACCCAA---------GATGCAAATCTATTTCTTTGTCTAACTAAAAACGGAGCTCACGTGTTAGGTACTATAACAATTAAAGGT---------------CTTAAAGGAGCACTGCGGGAAATGAACGATAACGCT---------------------------------TTATCTGTAAAACTTCCCTTTGACAATCAGGGAAATTTACTCAACTGTGCCTTG---------------------------------------------------------------------------------------------------GAATCATCCACCTGGCGTTACCAGGAAACCAAC------------------------------------------GCAGTGGCCTCTAATGCCTTAACATTTATGCCCAACAGTACAGTGTATCCC...---------------CGAAACAAAACCGCCGACCCAGGCAACATGCTCATCCAA---------------------------ATCTCGCCTAACATCACCTTCAGTGTCGTCTACAACGAGATAAAC---------------...------AGTGGGTATGCTTTTACGTTTAAATGGTCAGCCGAACCGGGA---------------------------AAACCTTTTCACCCACCCACCGCTGTATTTTGCTACATAACTGAACAA
TRN  10010101100011000
NAM  FIB1_ADE40/373-547
ASQ  LWTTADPS-PNATFYESL---DAKVWLVLVKCNGMVNGTISIKA-----QKGTLLKPTASFIS---------FVMYFYSDGTWRKNYPVFDNEG--------------------------ILANSATWGYRQGQSAN-----------TNVSNAVEFMPSSKRYP.-----NEKGSEVQNMALTYTFLQG--DPNMAISFQSIYNHAI-----.--EGYSLKFTWRVRNN---------ERFDIPCCSFSYVTEQ
DSQ  CTATGGACCACCGCGGACCCGTCT---CCTAACGCCACTTTTTATGAATCACTA---------GACGCCAAAGTGTGGCTAGTTTTAGTAAAATGCAACGGCATGGTTAACGGGACCATATCCATTAAAGCT---------------CAAAAAGGCACTTTACTTAAACCCACAGCTAGCTTTATTTCC---------------------------TTTGTCATGTATTTTTACAGCGACGGAACGTGGAGGAAAAACTATCCCGTGTTTGACAACGAAGGA------------------------------------------------------------------------------ATACTAGCAAACAGTGCCACATGGGGTTATCGACAAGGACAGTCTGCCAAC---------------------------------ACTAACGTTTCCAATGCTGTAGAATTTATGCCTAGCTCTAAAAGGTATCCC...---------------AATGAAAAAGGTTCTGAAGTTCAGAACATGGCTCTTACCTACACTTTTTTGCAAGGT------GACCCTAACATGGCCATATCTTTTCAGAGCATTTATAATCATGCAATA---------------...------GAAGGCTACTCATTAAAATTCACCTGGCGCGTTCGAAATAAT---------------------------GAACGTTTTGACATCCCCTGTTGCTCATTTTCTTATGTAACAGAACAA
TRN  10010101110011000
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