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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF00513 - Late_protein_L2)
FAM  PF00513
PID  Late_protein_L2
DES  Late Protein L2
IPR  IPR000784
ANO  29
ALN  588
AID  0.451235
APH  (VL2_HPV13/5-456:0.09041,(VL2_HPV11/4-448:0.17002,(VL2_HPV07/5-455:0.34026,(((((VL2_HPV52/5-457:0.18860,VL2_HPV33/5-458:0.16742):0.11362,(VL2_HPV35/5-460:0.19670,(VL2_HPV16/5-464:0.23163,VL2_HPV31/5-457:0.24043):0.05191):0.12799):0.09984,VL2_HPV34/5-464:0.34475):0.10723,(VL2_HPV42/5-468:0.15747,VL2_HPV32/5-467:0.21064):0.23686):0.04419,(((((VL2_HPV39/5-461:0.19721,VL2_HPV18/5-453:0.21098):0.09618,((VL2_HPV51/5-459:0.17883,VL2_HPV26/5-463:0.25786):0.11113,(VL2_HPV56/5-455:0.16080,VL2_HPV30/5-454:0.08518):0.20728):0.08299):0.09323,VL2_HPV03/5-464:0.23375):0.08888,VL2_HPV27/3-455:0.32809):0.07534,(((VL2_HPV63/3-504:0.35548,VL2_HPV1A/3-507:0.32904):0.25265,(((VL2_HPV49/3-521:0.19093,(VL2_HPV15/3-533:0.13633,VL2_HPV09/3-533:0.09765):0.14846):0.05077,(VL2_HPV14/3-519:0.12140,VL2_HPV05/3-518:0.12784):0.06466):0.29678,VL2_HPV04/3-520:0.74350):0.18670):0.23980,VL2_CRPVK/4-480:0.77388):0.57214):0.15763):0.12360):0.17517):0.10970,VL2_PCPV1/5-456:0.15800);
ATP  (VL2_HPV13/5-456,(VL2_HPV11/4-448,(VL2_HPV07/5-455,(((((VL2_HPV52/5-457,VL2_HPV33/5-458),(VL2_HPV35/5-460,(VL2_HPV16/5-464,VL2_HPV31/5-457))),VL2_HPV34/5-464),(VL2_HPV42/5-468,VL2_HPV32/5-467)),(((((VL2_HPV39/5-461,VL2_HPV18/5-453),((VL2_HPV51/5-459,VL2_HPV26/5-463),(VL2_HPV56/5-455,VL2_HPV30/5-454))),VL2_HPV03/5-464),VL2_HPV27/3-455),(((VL2_HPV63/3-504,VL2_HPV1A/3-507),(((VL2_HPV49/3-521,(VL2_HPV15/3-533,VL2_HPV09/3-533)),(VL2_HPV14/3-519,VL2_HPV05/3-518)),VL2_HPV04/3-520)),VL2_CRPVK/4-480))))),VL2_PCPV1/5-456);
ATL  10.9398
DNO  26
DLN  1764
DID  0.522199
DPH  (((((((((VL2_HPV18/5-453:0.21400,VL2_HPV39/5-461:0.22418):0.07148,(VL2_HPV26/5-463:0.26931,(VL2_HPV30/5-454:0.11763,VL2_HPV56/5-455:0.15451):0.13807):0.05288):0.05252,(VL2_HPV03/5-464:0.21953,VL2_HPV27/3-455:0.34653):0.07344):0.10265,((VL2_HPV32/5-467:0.31814,(VL2_HPV07/5-455:0.28176,(VL2_HPV11/4-448:0.17907,(VL2_HPV13/5-456:0.09403,VL2_PCPV1/5-456:0.12573):0.11813):0.12818):0.07899):0.06143,(VL2_HPV34/5-464:0.28835,((VL2_HPV31/5-457:0.23265,(VL2_HPV16/5-464:0.18100,VL2_HPV35/5-460:0.18273):0.04060):0.07976,(VL2_HPV33/5-458:0.15865,VL2_HPV52/5-457:0.19296):0.09558):0.06758):0.07193):0.06267):0.37821,(VL2_HPV1A/3-507:0.31555,VL2_HPV63/3-504:0.31134):0.16255):0.06939,VL2_HPV04/3-520:0.47536):0.20962,(VL2_HPV05/3-518:0.19711,VL2_HPV14/3-519:0.19785):0.05787):0.04266,VL2_HPV49/3-521:0.19210):0.11798,VL2_HPV09/3-533:0.14517,VL2_HPV15/3-533:0.15460);
DTP  (((((((((VL2_HPV18/5-453,VL2_HPV39/5-461),(VL2_HPV26/5-463,(VL2_HPV30/5-454,VL2_HPV56/5-455))),(VL2_HPV03/5-464,VL2_HPV27/3-455)),((VL2_HPV32/5-467,(VL2_HPV07/5-455,(VL2_HPV11/4-448,(VL2_HPV13/5-456,VL2_PCPV1/5-456)))),(VL2_HPV34/5-464,((VL2_HPV31/5-457,(VL2_HPV16/5-464,VL2_HPV35/5-460)),(VL2_HPV33/5-458,VL2_HPV52/5-457))))),(VL2_HPV1A/3-507,VL2_HPV63/3-504)),VL2_HPV04/3-520),(VL2_HPV05/3-518,VL2_HPV14/3-519)),VL2_HPV49/3-521),VL2_HPV09/3-533,VL2_HPV15/3-533);
DTL  8.10544
RID  0.457881
RPH  (((((((VL2_HPV34/5-464:0.36311,((VL2_HPV35/5-460:0.19579,(VL2_HPV16/5-464:0.23274,VL2_HPV31/5-457:0.23954):0.05495):0.11666,(VL2_HPV33/5-458:0.17060,VL2_HPV52/5-457:0.18586):0.11714):0.09147):0.10162,(VL2_HPV32/5-467:0.40408,(VL2_HPV07/5-455:0.33515,(VL2_HPV11/4-448:0.17247,(VL2_HPV13/5-456:0.08630,VL2_PCPV1/5-456:0.16139):0.10719):0.17399):0.11119):0.05275):0.12797,((VL2_HPV03/5-464:0.25243,((VL2_HPV18/5-453:0.20678,VL2_HPV39/5-461:0.19605):0.09803,(VL2_HPV26/5-463:0.32459,(VL2_HPV30/5-454:0.08459,VL2_HPV56/5-455:0.16083):0.20436):0.07746):0.08472):0.07573,VL2_HPV27/3-455:0.31225):0.11874):0.76012,(VL2_HPV04/3-520:0.71232,(VL2_HPV1A/3-507:0.33467,VL2_HPV63/3-504:0.34622):0.37013):0.11723):0.25958,(VL2_HPV05/3-518:0.12920,VL2_HPV14/3-519:0.11953):0.06738):0.04510,VL2_HPV49/3-521:0.19089):0.15009,VL2_HPV09/3-533:0.09882,VL2_HPV15/3-533:0.13489);
RTP  (((((((VL2_HPV34/5-464,((VL2_HPV35/5-460,(VL2_HPV16/5-464,VL2_HPV31/5-457)),(VL2_HPV33/5-458,VL2_HPV52/5-457))),(VL2_HPV32/5-467,(VL2_HPV07/5-455,(VL2_HPV11/4-448,(VL2_HPV13/5-456,VL2_PCPV1/5-456))))),((VL2_HPV03/5-464,((VL2_HPV18/5-453,VL2_HPV39/5-461),(VL2_HPV26/5-463,(VL2_HPV30/5-454,VL2_HPV56/5-455)))),VL2_HPV27/3-455)),(VL2_HPV04/3-520,(VL2_HPV1A/3-507,VL2_HPV63/3-504))),(VL2_HPV05/3-518,VL2_HPV14/3-519)),VL2_HPV49/3-521),VL2_HPV09/3-533,VL2_HPV15/3-533);
RTL  9.64616
LNK  VL2_CRPVK/4-480:P03108:
LNK  VL2_HPV03/5-464:P36744:X74462
LNK  VL2_HPV04/3-520:Q07862:X70827
LNK  VL2_HPV05/3-518:P06918:M17463
LNK  VL2_HPV07/5-455:P36745:X74463
LNK  VL2_HPV09/3-533:P36746:X74464
LNK  VL2_HPV11/4-448:P04013:M14119
LNK  VL2_HPV13/5-456:Q02275:X62843
LNK  VL2_HPV14/3-519:P36749:X74467
LNK  VL2_HPV15/3-533:P36750:X74468
LNK  VL2_HPV16/5-464:P03107:K02718
LNK  VL2_HPV18/5-453:P06793:X05015
LNK  VL2_HPV1A/3-507:P03105:V01116
LNK  VL2_HPV26/5-463:P36754:X74472
LNK  VL2_HPV27/3-455:P36755:X74473
LNK  VL2_HPV30/5-454:P36756:X74474
LNK  VL2_HPV31/5-457:P17389:J04353
LNK  VL2_HPV32/5-467:P36757:X74475
LNK  VL2_HPV33/5-458:P06418:M12732
LNK  VL2_HPV34/5-464:P36758:X74476
LNK  VL2_HPV35/5-460:P27234:X74477
LNK  VL2_HPV39/5-461:P24839:M62849
LNK  VL2_HPV42/5-468:P27235:
LNK  VL2_HPV49/3-521:P36762:X74480
LNK  VL2_HPV51/5-459:P26539:
LNK  VL2_HPV52/5-457:P36763:X74481
LNK  VL2_HPV56/5-455:P36765:X74483
LNK  VL2_HPV63/3-504:Q07863:X70828
LNK  VL2_PCPV1/5-456:Q02276:X62844
AMK  xx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxx.......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxxxxxxxxxxxxxxx..xxxxxxxxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..x..xxxxxxxxxxxxxxxxxxxxxxxxx.xx.xxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx
DMK  xxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx......xxx......xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  VL2_PCPV1/5-456
ASQ  R-.-PRRRKRASATQLYQTCKASGTCPPDIIAKVEQNTLADKILKWGSLGVFFGGLGIGTGSGTGGRTGYVPVQT----APRPAIPFGPTARPPIIVD-----------TVGPSDSSIVSLVEDST.....---.......------IINSAASDFVPPIRE---GFEISTSET...TTPAILDVS----VTTHN-TTSTSIFKNPAFAEPSIVQSQP-SVEASGHVLTSTY--TSTISSHS.........---VEDIPLDTFIVSSS..DS-NPASSTPVPTPVARPRLG..-LYSKALQQ-VQVTNPAFLSSPQR--..LITFDNPAYEGED.-ISLQFQHNT.-IHNPPDDAFMDIVRLHRPAITS-RRGIVRFSRIGQRGSMYTRSGKHIGGRVHFYTDISPISAAA..-..-EELEMQPLVAAAQDDS--------.--.---GLFDVYVDP----TPGPV-----....-AVQNMSYP----S--STSFVRSSMFTTKWGNTTVPLSLPSNIFAQPGPDIIF.-----PAAP.-GVPPYNPVIPSLPITPIFISGS----QFYLHPSLYLAR.-KRRKRVSL
DSQ  AGG---...---CCTCGCAGACGCAAACGTGCGTCTGCTACACAGTTATATCAAACCTGCAAAGCTTCTGGTACATGTCCTCCTGATATTATTGCAAAGGTAGAACAAAATACTCTTGCAGATAAAATATTAAAGTGGGGAAGTTTAGGAGTGTTTTTTGGGGGGCTTGGTATTGGCACAGGGTCTGGTACTGGCGGTAGAACTGGATATGTTCCTGTACAGACT------------GCCCCACGCCCTGCCATACCCTTTGGGCCTACTGCACGTCCTCCTATTATTGTTGAT---------------------------------ACAGTTGGCCCTAGTGACTCGTCTATTGTATCCTTAGTAGAAGATTCAACT...............---------.....................------------------ATTATTAATTCAGCAGCGTCTGACTTTGTGCCTCCTATTCGTGAG---------GGATTTGAAATAAGCACCTCTGAAACT.........ACTACTCCAGCCATTTTAGATGTATCT------------GTAACAACACACAAC---ACTACCTCTACAAGTATATTTAAAAATCCTGCCTTTGCAGAACCTTCTATTGTTCAGTCACAACCC---TCAGTTGAAGCAAGTGGACACGTTCTTACATCTACATAT------ACATCTACTATTTCCTCTCACTCT...........................---------GTAGAAGACATTCCATTGGATACTTTTATTGTATCTTCATCA......GATAGT---AATCCTGCATCCAGTACTCCTGTGCCTACACCTGTGGCACGTCCACGACTTGGC......---CTTTATAGTAAAGCGTTGCAGCAA---GTGCAGGTTACTAATCCTGCCTTTTTATCATCGCCACAACGC------......CTTATAACTTTTGATAACCCTGCTTATGAAGGTGAAGAT...---ATAAGTTTACAGTTTCAGCACAATACT...---ATACATAACCCTCCTGATGACGCTTTTATGGATATTGTAAGATTACATAGGCCGGCTATAACGTCT---AGGCGTGGTATTGTTAGGTTTAGTAGAATTGGTCAGCGAGGGTCCATGTATACACGCAGTGGCAAACATATTGGTGGACGGGTACATTTTTATACAGACATTTCTCCTATATCTGCAGCTGCA......---......---GAGGAACTTGAAATGCAGCCTCTTGTGGCTGCTGCGCAGGATGACAGT------------------------...------...---------GGATTATTTGATGTTTATGTAGACCCT------------ACCCCTGGTCCTGTA---------------............---GCAGTACAAAATATGTCGTATCCC------------TCC------TCCACATCGTTTGTACGGTCCTCTATGTTTACCACTAAGTGGGGTAATACTACTGTCCCTTTATCATTACCAAGTAACATATTTGCACAGCCAGGCCCTGATATAATATTT...---------------CCCGCCGCCCCT...---GGTGTACCACCGTATAACCCTGTTATACCGTCTTTACCTATAACTCCTATTTTTATTAGTGGGTCT------------CAATTTTATTTACATCCTTCCTTATATCTTGCACGC...---AAACGTCGTAAACGTGTTTCCTTG
TRN  10010101110011000
NAM  VL2_HPV13/5-456
ASQ  R-.-ARRRKRASATQLYQTCKASGTCPPDVIPKVEQNTLADKILKWGSLGVFFGGLGIGTGSGTGGRTGYVPVGS----TPRPAISTGPTARPPIVVD-----------TVGPTDPSIVSLVEESA.....---.......------IINSGVPDPLPPVHG---GFEITTSQS...ATPAILDVS----VTTQN-TTSTSIFRNPVFSEPSITQSQP-SIESGAHVFIS----PSTISPHS.........---TEDIPLDTFIVSSS..DS-NPASSTPVPATVARPRLG..-LYSRALHQ-VQVTDPAFLSSPQR--..LITFDNPTYEGED.-ISLQFAHNT.-IHEPPDEAFMDIIRLHRPAITS-RRGLVRFSRIGQRGSMYTRSGKHIGGRVHFFKDISPISAAA..-..-EEIELHPLVAAAQDHS--------.--.---GLFDIYAEP----DPDPV-----....-AVNTSGSL----SSASTPFAQSSLSSAPWGNTTVPLSLPGDIFIQPGPDITF.-----PTAP.-TVTPYNPVTPALPTGPVFITAS----GFYLYPTWYFTR.-KRRKRVSL
DSQ  AGG---...---GCTCGCAGACGCAAACGCGCTTCAGCTACACAACTATATCAAACTTGTAAGGCTTCTGGAACATGTCCTCCTGATGTTATACCAAAGGTTGAACAAAACACTCTTGCAGATAAAATATTAAAGTGGGGCAGTTTAGGAGTATTTTTTGGGGGGCTTGGCATTGGCACAGGCTCTGGTACTGGCGGTAGGACTGGCTATGTACCAGTAGGATCC------------ACCCCACGCCCTGCCATATCAACTGGGCCTACTGCACGTCCTCCTATTGTTGTTGAT---------------------------------ACTGTTGGGCCTACAGACCCTTCTATTGTATCTTTGGTAGAGGAATCAGCT...............---------.....................------------------ATTATTAATTCTGGAGTACCTGACCCTTTGCCTCCCGTTCATGGG---------GGTTTTGAAATCACCACATCTCAATCA.........GCCACTCCAGCAATATTGGATGTGTCT------------GTTACAACACAAAAC---ACTACGTCCACAAGTATATTTAGAAATCCTGTTTTTTCAGAACCTTCTATTACACAATCTCAACCT---TCTATTGAAAGTGGTGCACACGTGTTTATATCG------------CCATCTACTATTTCCCCTCATTCT...........................---------ACAGAAGACATTCCTTTAGATACATTTATTGTATCTTCCTCA......GATAGT---AATCCTGCATCAAGCACCCCTGTTCCAGCAACTGTTGCACGTCCACGTCTAGGC......---CTTTACAGTAGGGCCTTACATCAA---GTACAGGTTACTGATCCTGCCTTTTTATCGTCGCCCCAACGC------......CTTATAACCTTTGATAACCCTACATATGAAGGTGAAGAT...---ATAAGTTTGCAGTTTGCACACAATACC...---ATTCATGAACCCCCTGATGAGGCATTTATGGATATTATAAGACTACATAGGCCAGCCATAACATCA---CGGCGTGGTCTTGTTAGGTTTAGTAGAATTGGTCAGAGGGGGTCTATGTATACTCGAAGCGGCAAGCATATAGGTGGAAGGGTCCATTTCTTTAAGGATATTTCTCCTATATCTGCAGCTGCA......---......---GAAGAAATAGAATTACACCCCCTTGTGGCTGCTGCACAGGATCACAGT------------------------...------...---------GGTTTGTTTGATATTTATGCAGAACCT------------GACCCTGACCCTGTG---------------............---GCTGTAAACACCTCTGGGTCATTG------------TCTTCTGCCTCCACACCATTTGCACAATCTTCTTTGTCTTCCGCCCCATGGGGTAATACTACTGTTCCTCTTTCACTACCAGGTGATATATTTATACAGCCTGGTCCTGACATAACATTC...---------------CCAACTGCACCT...---ACAGTAACGCCTTATAATCCTGTTACGCCTGCTTTACCTACAGGTCCTGTTTTTATTACTGCTTCT------------GGATTTTATTTATATCCTACATGGTATTTTACACGC...---AAACGCCGTAAACGTGTTTCCTTG
TRN  10010101110011000
NAM  VL2_HPV11/4-448
ASQ  R-.-ARRRKRASATQLYQTCKATGTCPPDVIPKVEHTTIADQILKWGSLGVFFGGLGIGTGAGSGGRAGYIPLGS----SPKPAITGGPAARPPVLVE-----------PVAPSDPSIVSLIEESA.....---.......------IINAGAPEVVPPTQG---GFTITSSES...TTPAILDVS----VTNH---TTTSVFQNPLFTEPSVIQPQP-PVEASGHILIS----APTITSQH.........---VEDIPLDTFVVSSS..DS-GPTSSTPLPRAFPRPRVG..-LYSRALQQ-VQVTDPAFLSTPQR--..LVTYDNPVYEGED.-VSLQFTHES.-IHNAPDEAFMDIIRLHRPAITS-RRGLVRFSRIGQRGSMYTRSGQHIGARIHYFQDISPVTQAA..-..-EEIELHPLVAAENDT---------.--.-----FDIYAEP-F--DPIPD-----....-PVQHSVT-------QSYLTSTPNTLSQSWGNTTVPLSIPSDWFVQSGPDITF.-----PTAS.-MGTPFSPVTPALPTGPVFITGS----DFYLHPTWYFAR.-RRRKRIPL
DSQ  AGG---...---GCACGCAGACGTAAACGTGCGTCAGCCACACAACTATATCAAACATGCAAGGCCACTGGTACATGTCCCCCAGATGTAATTCCTAAAGTTGAACATACTACTATTGCAGATCAAATATTAAAATGGGGAAGCTTAGGGGTTTTTTTTGGTGGGTTAGGTATTGGTACAGGGGCTGGTAGTGGCGGTCGTGCAGGGTATATACCCTTGGGAAGC------------TCTCCCAAGCCTGCTATTACTGGGGGGCCAGCAGCACGTCCGCCAGTGCTTGTGGAG---------------------------------CCTGTTGCCCCTTCCGATCCCTCCATTGTGTCCTTAATTGAGGAGTCTGCT...............---------.....................------------------ATTATTAATGCTGGTGCACCTGAGGTGGTACCCCCTACACAGGGT---------GGCTTTACTATAACATCATCTGAATCG.........ACTACACCTGCTATTTTAGATGTGTCT------------GTTACCAATCAC---------ACTACCACTAGTGTGTTTCAAAATCCCCTGTTTACAGAACCGTCTGTAATACAGCCCCAACCA---CCTGTGGAGGCCAGTGGTCACATACTTATATCT------------GCCCCAACAATAACATCCCAACAT...........................---------GTAGAAGACATTCCACTAGACACTTTTGTTGTATCCTCTAGT......GATAGT---GGACCTACATCCAGTACTCCTCTTCCTCGTGCTTTTCCTCGGCCTCGGGTGGGT......---TTGTATAGTCGTGCCTTACAGCAG---GTACAGGTTACGGACCCCGCGTTTTTGTCCACGCCACAGCGA------......TTGGTAACTTATGACAACCCTGTCTATGAAGGAGAAGAT...---GTAAGTTTACAATTTACCCATGAGTCT...---ATCCACAATGCACCTGATGAAGCATTTATGGATATTATTAGACTACATAGACCAGCTATAACGTCC---AGACGGGGTCTTGTGCGTTTTAGTCGCATTGGGCAACGGGGGTCCATGTACACACGCAGTGGACAACATATAGGTGCCCGCATACATTATTTTCAGGACATTTCACCAGTTACACAAGCTGCA......---......---GAGGAAATAGAACTGCACCCTCTAGTGGCTGCAGAAAATGACACG---------------------------...------...---------------TTTGATATTTATGCTGAACCA---TTT------GACCCTATCCCTGAC---------------............---CCTGTCCAACATTCTGTTACA---------------------CAGTCTTATCTTACCTCCACACCTAATACCCTTTCACAATCGTGGGGTAATACCACAGTCCCATTGTCAATCCCTAGTGACTGGTTTGTGCAGTCTGGGCCTGACATAACTTTT...---------------CCTACTGCATCT...---ATGGGAACACCCTTTAGTCCTGTAACTCCTGCTTTACCTACAGGCCCTGTTTTTATTACAGGTTCT------------GACTTCTATTTGCATCCTACATGGTACTTTGCACGC...---AGACGCCGTAAACGTATTCCCTTA
TRN  10010101100011000
NAM  VL2_HPV07/5-455
ASQ  R-.-PRRRKRASATQLYQTCKAAGTCPPDVVNKVEQTTVADQILKWGSMGVFFGGLGIGSGSGSGGRAGYVPLSTGSRAIPPKSLAPDVIARPPVVVD-----------TVAPTDPSIVSLIEESS.....---.......------IIQSGAPSPVIPTEG---GFSITSSGT...DVPAILDIS----STNTV-HVTSTTHHNPIFTDPSVVQPIP-PVEASGRIIVS----HSSITTGA.........---AEEIPMDTFVVHS-..---DPLSSTPVPGVSARPKVG..-LYSKALQQ-VEIVDPTFMSTPQR--..LITYDNPVFDNIE.-DTLHFEQPS.-IHNAPDPAFMDIITLHRPALTS-RRGVVRFSRVGQRGTMYTRRGTRIGGRVHFFKDISPIASS-..-..-EEIELHPLVASP------------.--.NNSDLFDVYADI-D--DIDEN-----....-ILYSTIDN----NTPTSTYSLYPGNSTRIANTSIPLATIPDTFLTSGPDIVF.-----PSVP.-AGTPYLPVSPSIPAISVLIRGT----DYYLNPAYYFR-.-KRRKRILA
DSQ  AGG---...---CCCCGTAGGCGTAAGCGGGCGTCCGCAACACAGTTATATCAAACATGCAAGGCAGCAGGCACCTGTCCACCAGATGTTGTTAATAAGGTGGAGCAAACAACCGTTGCAGATCAAATTTTAAAATGGGGCAGCATGGGAGTGTTTTTTGGCGGTCTTGGCATAGGTTCAGGCTCTGGCTCAGGCGGCCGTGCTGGCTATGTGCCTTTGTCTACAGGTTCCCGTGCAATACCTCCTAAATCATTAGCTCCAGATGTTATTGCTAGGCCGCCTGTTGTGGTGGAT---------------------------------ACTGTCGCCCCCACTGATCCATCCATTGTATCTTTAATTGAGGAAAGTAGT...............---------.....................------------------ATTATTCAGTCTGGGGCTCCTTCGCCAGTAATTCCCACAGAGGGT---------GGGTTTTCAATAACATCATCAGGTACA.........GATGTCCCTGCAATTTTAGATATATCT------------TCTACTAATACAGTA---CATGTTACATCTACCACACACCATAACCCCATATTTACTGATCCTTCGGTTGTGCAGCCTATTCCA---CCTGTAGAGGCTAGTGGTCGTATCATTGTGTCG------------CATTCCTCTATTACTACTGGTGCA...........................---------GCTGAAGAAATACCTATGGACACATTTGTTGTTCATAGT---......---------GATCCACTGTCCAGTACACCTGTGCCTGGTGTGTCAGCGCGGCCTAAAGTTGGG......---CTATATAGCAAAGCTTTGCAGCAA---GTAGAAATAGTAGATCCAACATTTATGTCCACCCCTCAACGT------......TTAATTACTTATGACAATCCTGTATTTGACAACATTGAA...---GATACACTACATTTTGAACAGCCTTCT...---ATTCATAACGCACCAGATCCTGCCTTTATGGATATCATTACTTTACATAGGCCTGCCTTGACCTCT---AGGCGTGGTGTGGTACGTTTTAGTAGGGTGGGTCAACGTGGAACCATGTATACACGTCGTGGTACCCGTATTGGTGGTCGTGTACACTTTTTTAAAGATATTAGTCCTATAGCTTCATCT---......---......---GAAGAAATTGAATTGCACCCTCTAGTGGCCTCACCT------------------------------------...------...AATAACAGTGACCTTTTTGATGTTTATGCAGATATA---GAT------GATATTGATGAAAAT---------------............---ATATTATATTCTACTATAGACAAT------------AATACACCAACTTCTACCTATTCCTTGTATCCAGGTAATTCTACACGCATAGCAAATACATCTATACCTCTTGCCACAATTCCTGATACATTCTTAACATCTGGTCCTGACATAGTGTTT...---------------CCTTCTGTTCCT...---GCAGGTACACCATATTTGCCTGTGTCACCTTCTATACCTGCCATATCTGTACTGATTCGCGGTACT------------GATTATTATTTGAATCCTGCATACTATTTCAGA---...---AAACGCCGAAAGCGCATATTAGCA
TRN  10010101100011000
NAM  VL2_HPV52/5-457
ASQ  R-.STRH-KRASATQLYQTCKASGTCPPDVIPKVEGTTIADQLLKYGSLGVFFGGLGIGTGAGSGGRAGYVPLS----TRPPTSSITTSTIRPPVTVE-----------PIGPLEPSIVSMIEETT.....---.......------FIESGAPAPSIPSAT---GFDVTTSAN...NTPAIINVT----SIGESSVQSVSTHLNPTFTEPSIIQPPA-PAEASGHVLFS----SPTISTHT.........---YEEIPMDTFVTSTD..SS-SVTSSTPIPGSRPTTRLG..-LYSRATQQ-VKVVDPAFMSSPQK--..LVTYNNPVFEGVDtDETIIFDRSQ.-LLPAPDPDFLDIIALHRPALTS-RRGTVRFSRLGNKATLRTRSGKQIGARVHYYHDISPIQP--..AevQEDIELQPLLP----------QSVS.PYtINDGLYDVYADS----LQQPT-----....-FHLP-----------STLSTHNN-TFTVPINSGIDFVYQPTMSIESGPDIPL.-----PSLP.-THTPFVPIAPTAPSTSIIVDGT----DFILHPSYFLLR.-RRRKRFPY
DSQ  CGG---...TCTACACGGCAC---AAACGTGCTTCTGCAACACAGCTATATCAAACATGCAAAGCCTCTGGCACCTGCCCCCCCGATGTTATTCCTAAAGTGGAAGGCACAACTATTGCAGATCAACTTTTAAAATATGGCAGCCTAGGGGTGTTTTTTGGAGGTTTGGGTATAGGTACAGGTGCAGGCTCTGGTGGTAGGGCAGGCTATGTGCCATTGTCC------------ACTCGTCCTCCCACTAGTAGTATTACCACGTCCACCATTCGTCCCCCTGTAACTGTAGAA---------------------------------CCCATTGGTCCCTTAGAACCATCTATAGTTTCTATGATAGAAGAAACAACA...............---------.....................------------------TTTATTGAGTCTGGCGCACCTGCTCCATCTATTCCATCAGCAACA---------GGGTTTGATGTTACAACATCTGCAAAT.........AATACTCCTGCAATAATTAATGTAACA------------TCTATAGGTGAATCATCTGTACAATCAGTTTCTACACATTTAAATCCTACATTCACTGAACCATCTATAATACAGCCCCCGGCA---CCTGCAGAAGCATCTGGTCATGTATTGTTTTCT------------AGTCCAACTATTAGTACACACACC...........................---------TATGAAGAAATCCCTATGGATACATTTGTTACCTCTACTGAC......AGCAGC---AGTGTAACAAGTAGTACACCTATTCCAGGGTCTCGCCCTACGACACGCCTTGGT......---TTATATAGCCGTGCCACACAACAG---GTTAAGGTAGTCGACCCTGCTTTTATGTCATCACCACAGAAA------......TTAGTAACATATAACAATCCTGTTTTTGAGGGCGTTGATacaGATGAAACTATAATTTTTGATCGTTCACAA...---CTTTTACCTGCACCGGATCCTGATTTTTTAGACATTATAGCTTTGCATAGGCCTGCATTAACCTCT---CGAAGAGGTACTGTTAGGTTTAGCAGGCTTGGTAATAAGGCCACCCTACGTACACGTAGTGGAAAACAAATTGGGGCACGGGTACATTATTATCATGATATTAGTCCTATCCAGCCT------......GCTgaagttCAGGAAGACATAGAATTGCAACCTTTATTACCA------------------------------CAGTCTGTGTCC...CCTTACactATTAATGATGGTTTGTATGATGTGTATGCAGATTCT------------TTGCAGCAACCCACG---------------............---TTTCACTTACCT---------------------------------TCCACACTTTCTACCCATAATAAT---ACTTTCACTGTACCTATTAATAGTGGTATTGACTTTGTATATCAACCCACTATGTCCATTGAGTCAGGTCCTGACATTCCATTA...---------------CCTTCGTTACCC...---ACACATACTCCTTTTGTTCCTATAGCCCCTACAGCTCCATCTACATCTATTATTGTTGATGGTACA------------GATTTTATTTTACATCCTAGTTATTTTTTACTACGT...---CGCAGGCGTAAACGTTTTCCATAT
TRN  10010101110011000
NAM  VL2_HPV33/5-458
ASQ  R-.STRR-KRASATQLYQTCKATGTCPPDVIPKVEGSTIADQILKYGSLGVFFGGLGIGTGSGSGGRTGYVPIG----TDPPTAAIPLQPIRPPVTVD-----------TVGPLDSSIVSLIEETS.....---.......------FIEAGAPAPSIPTPS---GFDVTTSAD...TTPAIINVS----SVGESSIQTISTHLNPTFTEPSVLHPPA-PAEASGHFIFS----SPTVSTQS.........---YENIPMDTFVVSTD..SS-NVTSSTPIPGSRPVARLG..-LYSRNTQQ-VKVVDPAFLTSPHK--..LITYDNPAFESFDpEDTLQFQHSD.-ISPAPDPDFLDIIALHRPAITS-RRHTVRFSRVGQKATLKTRSGKQIGARIHYYQDLSPIVPLDhtVpnEQ-YELQPLHD----------TSTS.SYsINDGLYDVYADD----VDNVH-----....-TPMQ--H-----S-YSTFATTRTSNVSIPLNTG---FDTPVMS---GPDIPS.-----PLFP.-TSSPFVPISPFFPFDTIVVDGA----DFVLHPSYFILR.-RRRKRFPY
DSQ  CGA---...TCTACAAGGCGC---AAGCGTGCATCTGCAACACAACTATACCAAACATGCAAGGCCACAGGCACCTGCCCACCCGATGTTATTCCTAAAGTGGAAGGAAGTACCATAGCAGATCAAATTCTTAAATATGGCAGTTTAGGGGTTTTTTTTGGTGGTTTAGGTATTGGCACAGGCTCTGGTTCAGGTGGAAGGACTGGCTATGTACCTATTGGT------------ACTGACCCACCTACAGCTGCAATCCCCTTGCAGCCTATACGTCCTCCGGTTACTGTAGAC---------------------------------ACTGTTGGACCTTTAGACTCGTCTATAGTGTCATTAATAGAAGAAACAAGT...............---------.....................------------------TTTATAGAGGCAGGTGCACCAGCCCCATCTATTCCTACACCATCA---------GGTTTTGATGTTACTACATCTGCAGAT.........ACTACACCTGCAATTATTAATGTTTCA------------TCTGTTGGGGAGTCATCTATTCAAACTATTTCTACACATTTAAATCCCACATTTACTGAACCATCTGTACTACACCCTCCAGCG---CCTGCAGAAGCCTCTGGACATTTTATATTTTCT------------TCCCCTACTGTTAGCACACAAAGT...........................---------TATGAAAACATACCAATGGATACCTTTGTTGTTTCCACAGAC......AGTAGT---AATGTAACATCAAGCACGCCCATTCCAGGGTCTCGCCCTGTGGCACGCCTTGGT......---TTATATAGTCGCAATACCCAACAG---GTTAAGGTTGTTGACCCTGCTTTTTTAACATCGCCTCATAAA------......CTTATAACATATGATAATCCTGCATTTGAAAGCTTTGACcctGAAGACACATTACAATTTCAACATAGTGAT...---ATATCACCTGCTCCTGATCCTGACTTTCTAGATATTATTGCATTACATAGGCCTGCTATTACATCT---CGTAGACATACTGTGCGTTTTAGTAGAGTAGGTCAAAAAGCCACACTTAAAACTCGCAGTGGTAAACAAATTGGAGCTAGAATACATTATTATCAGGATTTAAGTCCTATTGTGCCTTTAGACcacaccGTGccaaatGAACAA---TATGAATTACAGCCTTTACATGAT------------------------------ACTTCTACATCG...TCTTATagtATTAATGATGGTTTGTATGATGTTTATGCTGACGAT------------GTGGATAATGTACAC---------------............---ACCCCAATGCAA------CAC---------------TCA---TACAGTACGTTTGCAACAACACGTACCAGCAATGTGTCTATACCTTTAAATACAGGA---------TTTGATACTCCTGTTATGTCT---------GGCCCTGATATACCTTCC...---------------CCTTTATTTCCC...---ACATCTAGCCCATTTGTTCCTATTTCGCCTTTTTTTCCTTTTGACACCATTGTTGTAGACGGTGCT------------GACTTTGTTTTACATCCTAGTTATTTTATTTTACGT...---CGCAGGCGTAAACGTTTTCCATAT
TRN  10010101110011000
NAM  VL2_HPV35/5-460
ASQ  R-.STKRVKRASATQLYRTCKAAGTCPPDVIPKVEGNTVADQILKYGSMAVFFGGLGIGSGSGTGGRSGYVPLG----TTPPTAA-TNIPIRPPVTVESI------PLDTIGPLDSSIVSLVEETS.....---.......------FIESGAPVVTPRVPP-TTGFTITTSTD...TTPAILDV------------TSISTHDNPTFTDPSVLHPPT-PAETSGHFVLS----SSSISTHN.........---YEEIPMDTFIVSTD..SN-NITNSTPIPGSRPTTRLG..-LYSKGTQQ-VKVVDPAFMTSPAK--..LITYDNPAYEGLNpDTTLQFEHED.-ISLAPDPDFMDIIALHRPALTS-RKGTIRYSRVGNKRTMHTRSGKAIGARVHYYQDLSSIT---..-..-EDIELQPLQ-HVPSSL---PHTTV.STsLNDGMFDIYAPI----DTEED-----....-IIFSASS-----N--NTLYTTSNT-AYVPSNTTIPLSSGYDIPITAGPDIVF.-----NSNT.-ITNTVLPVPTG-PIYSIIADGG----DFYLHPSYYLLK.-RRRKRIPY
DSQ  AGG---...TCTACAAAACGTGTTAAACGTGCATCTGCAACACAACTATATCGTACTTGCAAAGCTGCAGGAACTTGTCCACCAGATGTTATACCTAAGGTTGAGGGTAATACTGTTGCTGATCAAATTTTAAAATATGGCAGCATGGCTGTGTTTTTTGGGGGGTTAGGAATTGGTTCTGGATCTGGCACAGGTGGAAGATCTGGATATGTTCCACTGGGT------------ACAACACCTCCAACGGCTGCC---ACAAACATTCCTATACGACCCCCTGTAACTGTGGAAAGTATA------------------CCATTAGACACAATTGGCCCTTTAGATTCTTCTATAGTGTCATTAGTAGAGGAAACTAGT...............---------.....................------------------TTTATTGAGTCTGGTGCCCCTGTTGTTACACCAAGGGTCCCACCT---ACAACAGGTTTTACAATAACCACATCTACAGAT.........ACCACACCTGCTATTTTAGATGTG------------------------------------ACATCCATAAGTACACATGATAATCCTACTTTCACTGATCCTTCTGTTTTACACCCACCCACG---CCTGCAGAAACTTCAGGTCATTTTGTACTTTCA------------TCATCTTCTATTAGTACACATAAT...........................---------TATGAAGAAATCCCTATGGATACTTTTATTGTTTCCACAGAC......AGCAAT---AATATAACTAATAGCACGCCTATTCCAGGGTCTCGCCCTACGACACGCCTAGGA......---TTATATAGTAAAGGTACCCAGCAG---GTTAAGGTTGTTGACCCTGCCTTTATGACTTCTCCTGCAAAA------......CTTATTACATATGATAATCCTGCATATGAAGGCCTTAACcctGATACAACCTTACAATTTGAGCATGAGGAT...---ATTAGCTTAGCTCCGGATCCTGACTTTATGGACATTATAGCTTTACATAGGCCTGCACTAACATCT---AGGAAAGGCACTATTAGATATAGTAGAGTAGGTAATAAACGTACTATGCATACACGAAGTGGAAAAGCTATAGGGGCACGGGTACATTATTATCAGGATTTAAGTAGTATTACT---------......---......---GAAGATATAGAATTACAACCCTTACAA---CATGTACCATCCTCTTTA---------CCACATACCACTGTT...TCAACAtcaTTAAATGATGGTATGTTTGATATTTATGCTCCTATA------------GATACTGAGGAAGAT---------------............---ATTATATTTTCAGCATCTTCT---------------AAC------AATACTTTATATACTACATCTAACACT---GCATATGTTCCTAGCAATACTACTATACCATTAAGTAGTGGCTATGATATTCCTATAACAGCAGGGCCAGACATTGTATTT...---------------AACTCTAATACT...---ATTACTAACACTGTACTACCGGTACCCACAGGT---CCTATATATTCTATTATTGCAGATGGGGGT------------GACTTTTATTTACACCCTAGTTATTATTTATTAAAA...---CGACGTCGTAAACGTATCCCATAT
TRN  10010101100011000
NAM  VL2_HPV16/5-464
ASQ  R-.SAKRTKRASATQLYKTCKQAGTCPPDIIPKVEGKTIAEQILQYGSMGVFFGGLGIGTGSGTGGRTGYIPLG----TRPPTATDTLAPVRPPLTVD-----------PVGPSDPSIVSLVEETS.....---.......------FIDAGAPTSVPSIPPDVSGFSITTSTD...TTPAILDIN----NT----VTTVTTHNNPTFTDPSVLQPPT-PAETGGHFTLS----SSTISTHN.........---YEEIPMDTFIVSTN..PN-TVTSSTPIPGSRPVARLG..-LYSRTTQQ-VKVVDPAFVTTPTK--..LITYDNPAYEGIDvDNTLYFSSNDnSINIAPDPDFLDIVALHRPALTS-RRTGIRYSRIGNKQTLRTRSGKSIGAKVHYYYDLSTIDPA-..-..-EEIELQTITPSTYTTT---SHAAS.PTsINNGLYDIYA---------DD-----....-FITDTST-----TPVPSVPSTSLS-GYIPANTTIPFGGAYNIPLVSGPDIPI.-----NITD.-QAPSLIPIVPGSPQYTIIADAG----DFYLHPSYYMLR.-KRRKRLPY
DSQ  CGT---...TCTGCAAAACGCACAAAACGTGCATCGGCTACCCAACTTTATAAAACATGCAAACAGGCAGGTACATGTCCACCTGACATTATACCTAAGGTTGAAGGCAAAACTATTGCTGAACAAATATTACAATATGGAAGTATGGGTGTATTTTTTGGTGGGTTAGGAATTGGAACAGGGTCGGGTACAGGCGGACGCACTGGGTATATTCCATTGGGA------------ACAAGGCCTCCCACAGCTACAGATACACTTGCTCCTGTAAGACCCCCTTTAACAGTAGAT---------------------------------CCTGTGGGCCCTTCTGATCCTTCTATAGTTTCTTTAGTGGAAGAAACTAGT...............---------.....................------------------TTTATTGATGCTGGTGCACCAACATCTGTACCTTCCATTCCCCCAGATGTATCAGGATTTAGTATTACTACTTCAACTGAT.........ACCACACCTGCTATATTAGATATTAAT------------AATACT------------GTTACTACTGTTACTACACATAATAATCCCACTTTCACTGACCCATCTGTATTGCAGCCTCCAACA---CCTGCAGAAACTGGAGGGCATTTTACACTTTCA------------TCATCCACTATTAGTACACATAAT...........................---------TATGAAGAAATTCCTATGGATACATTTATTGTTAGCACAAAC......CCTAAC---ACAGTAACTAGTAGCACACCCATACCAGGGTCTCGCCCAGTGGCACGCCTAGGA......---TTATATAGTCGCACAACACAACAG---GTTAAAGTTGTAGACCCTGCTTTTGTAACCACTCCCACTAAA------......CTTATTACATATGATAATCCTGCATATGAAGGTATAGATgtgGATAATACATTATATTTTTCTAGTAATGATaatAGTATTAATATAGCTCCAGATCCTGACTTTTTGGATATAGTTGCTTTACATAGGCCAGCATTAACCTCT---AGGCGTACTGGCATTAGGTACAGTAGAATTGGTAATAAACAAACACTACGTACTCGTAGTGGAAAATCTATAGGTGCTAAGGTACATTATTATTATGATTTAAGTACTATTGATCCTGCA---......---......---GAAGAAATAGAATTACAAACTATAACACCTTCTACATATACTACCACT---------TCACATGCAGCCTCA...CCTACTtctATTAATAATGGATTATATGATATTTATGCA---------------------------GATGAC---------------............---TTTATTACAGATACTTCTACA---------------ACCCCGGTACCATCTGTACCCTCTACATCTTTATCA---GGTTATATTCCTGCAAATACAACAATTCCTTTTGGTGGTGCATACAATATTCCTTTAGTATCAGGTCCTGATATACCCATT...---------------AATATAACTGAC...---CAAGCTCCTTCATTAATTCCTATAGTTCCAGGGTCTCCACAATATACAATTATTGCTGATGCAGGT------------GACTTTTATTTACATCCTAGTTATTACATGTTACGA...---AAACGACGTAAACGTTTACCATAT
TRN  10010101110011000
NAM  VL2_HPV31/5-457
ASQ  R-.STKRTKRASATQLYQTCKAAGTCPSDVIPKIEHTTIADQILRYGSMGVFFGGLGIGSGSGTGGRTGYVPLS----TRPSTVSEASIPIRPPVSID-----------PVGPLDPSIVSLVEESG.....---.......------IVDVGAPAPIPHPPT-TSGFDIATTAD...TTPAILDV------------TSVSTHENPTFTDPSVLQPPT-PAETSGHLLLS----SSSISTHN.........---YEEIPMDTFIVSTN..NE-NITSSTPIPGVRRPARLG..-LYSKATQQ-VKVIDPTFLSAPKQ--..LITYENPAYETVNaEESLYFSNTS.-HNIAPDPDFLDIIALHRPALTS-RRNTVRYSRLGNKQTLRTRSGATIGARVHYYYDISSINPAG..-..-ESIEMQPLG----------ASATT.TStLNDGLYDIYADT----DFTVD-----....-TPATHNV-----SPSTAVQSTSAVSAYVPTNTTVPLSTGFDIPIFSGPDVPI.-----EHAP.-TQVFPFPLAPTTPQVSIFVDGG----DFYLHPSYYMLK.-RRRKRVSY
DSQ  CGC---...TCTACAAAACGCACTAAACGTGCGTCTGCTACACAATTATATCAAACATGTAAAGCAGCAGGTACTTGTCCATCAGACGTTATACCTAAAATAGAACATACTACCATTGCAGACCAAATATTAAGGTATGGTAGTATGGGTGTTTTTTTTGGTGGGTTGGGTATTGGGTCCGGCTCTGGTACTGGGGGTCGCACTGGATATGTCCCTCTTAGT------------ACACGTCCTTCTACAGTATCTGAGGCAAGTATACCTATTAGACCACCAGTTAGCATTGAC---------------------------------CCTGTAGGTCCCTTGGACCCCTCTATAGTAAGTCTTGTTGAAGAATCTGGA...............---------.....................------------------ATTGTTGATGTTGGTGCCCCTGCTCCTATACCACACCCTCCTACA---ACATCTGGGTTTGACATTGCTACAACTGCAGAC.........ACAACACCTGCAATTTTAGATGTA------------------------------------ACAAGTGTTAGCACACATGAAAATCCTACTTTTACTGATCCATCTGTATTGCAGCCTCCTACA---CCTGCAGAAACATCAGGTCATTTACTACTTTCA------------TCATCATCTATTAGCACACATAAT...........................---------TATGAGGAAATACCTATGGATACATTTATTGTTTCTACTAAT......AATGAA---AACATAACAAGTAGCACACCCATTCCAGGGGTGCGCCGTCCTGCACGTTTAGGG......---TTATATAGTAAGGCTACACAACAA---GTAAAAGTTATTGATCCAACGTTTCTTAGTGCTCCAAAACAG------......CTAATTACATATGAAAACCCTGCCTATGAAACTGTAAATgctGAAGAATCTTTATACTTTTCCAATACATCG...---CATAATATAGCCCCTGATCCCGACTTTCTAGATATTATAGCATTACATAGGCCTGCCCTTACCTCA---CGTAGGAACACTGTTAGATATAGTAGACTAGGTAATAAACAAACTTTGCGCACTCGTAGTGGTGCTACTATTGGTGCAAGGGTGCATTATTATTATGATATTAGTAGTATTAATCCTGCAGGT......---......---GAAAGTATTGAAATGCAACCTTTAGGG------------------------------GCGTCTGCAACTACT...ACTTCTactTTAAATGATGGCTTATATGACATTTATGCAGACACT------------GATTTTACTGTGGAT---------------............---ACACCTGCCACACATAATGTT---------------TCCCCTTCTACTGCTGTACAGTCCACATCTGCTGTGTCTGCCTATGTACCTACAAATACCACTGTGCCACTAAGTACAGGTTTTGACATTCCCATATTTTCTGGGCCTGATGTACCTATA...---------------GAGCATGCACCT...---ACACAGGTTTTCCCATTTCCTTTGGCCCCTACAACGCCACAAGTGTCTATTTTTGTTGATGGGGGT------------GATTTTTATTTGCACCCTAGTTATTATATGTTAAAA...---CGTCGACGTAAACGTGTATCATAT
TRN  10010101110011000
NAM  VL2_HPV34/5-464
ASQ  -RdTHIRRKRASATQLYKTCKQSGTCPPDIIPKVEGNTLADQILKYGSIGVFFGGLGIGSGSGTGGRTGYVPLPT--TTPSRPVEIPLQPTRPPVITS------------VGASDSSIVSLVEESS.....---.......------FIEAGVPGPTSIVPS-SSGFNVTTSVD...STPAIIDVA----TISDTTQVSVSTFNNPTFTDPSVLQPPP-PLEASGRLLFS----NDTVTTHS.........---YENIPLDTFVVTTD..NN-SIVSSTPIPGRHPPARLG..-LYGRAIQQ-VKVVDPAFVTTPTR--..LVTYDNPAFEGLQ.DTTLEFQHSD.-LHNAPDSDFLDIVKLHRPALTA-RKTGIRVSRLGQRATMFTRSGKRIGGRVHFYHDLSPIP---..-..TENIELQPLLPSAS------ATVTD.ANgINDGLYDVLLDN----NVDIT-----....-EVETPTG-----TNTQSVFASEI--STTTANTTIPLNAGLDTHP--GPDIAL.-----PVPT.-AETIFTPTVPVQPSGPIYIYGS----DFILHPSLYVIP.-RKRKRLSY
DSQ  ---CGTgacACACATATAAGACGTAAACGTGCATCAGCCACACAATTATACAAAACATGTAAGCAAAGTGGCACATGTCCCCCTGACATAATTCCAAAGGTTGAGGGCAATACTTTAGCTGACCAAATATTAAAATATGGTAGCATTGGGGTATTTTTTGGGGGTTTGGGTATTGGTAGCGGGTCAGGAACCGGGGGTCGTACAGGATATGTGCCATTACCCACA------ACTACTCCATCTAGACCAGTTGAAATTCCTTTGCAACCTACCAGACCTCCTGTTATTACATCT------------------------------------GTAGGGGCCTCTGATTCTTCTATAGTTTCATTAGTGGAGGAGTCAAGT...............---------.....................------------------TTTATTGAAGCTGGTGTGCCAGGTCCTACCTCCATAGTGCCTTCT---AGTTCTGGATTTAATGTAACAACATCTGTGGAC.........AGTACACCTGCTATTATAGATGTGGCA------------ACTATAAGTGACACTACACAAGTATCTGTTAGTACATTTAACAATCCAACTTTTACTGACCCATCCGTGTTGCAACCTCCTCCA---CCCTTAGAGGCCTCTGGCAGACTTTTATTTTCA------------AATGATACTGTAACTACTCATTCT...........................---------TATGAAAATATACCTCTTGACACATTTGTAGTTACAACAGAT......AACAAT---AGTATTGTTAGTAGTACGCCCATTCCAGGGAGGCACCCTCCTGCACGCTTAGGG......---CTTTATGGACGTGCTATACAACAG---GTTAAGGTTGTAGACCCTGCTTTTGTAACAACGCCTACACGT------......TTGGTAACATATGATAATCCTGCCTTTGAGGGCCTGCAA...GATACCACATTAGAATTTCAGCACAGTGAC...---TTGCATAATGCTCCTGACTCTGATTTTTTAGATATTGTAAAGTTACATAGGCCTGCTTTAACTGCT---AGAAAAACTGGCATACGTGTTAGTAGACTAGGACAACGTGCCACTATGTTTACTAGAAGTGGCAAACGTATAGGTGGTAGGGTACATTTTTATCATGATTTAAGTCCAATACCT---------......---......ACGGAAAATATTGAACTGCAGCCTTTACTGCCTTCTGCATCT------------------GCTACTGTAACAGAT...GCTAATggcATTAATGATGGGCTATATGATGTATTGTTAGATAAT------------AATGTAGATATTACT---------------............---GAAGTGGAAACACCTACTGGT---------------ACAAACACACAAAGTGTTTTTGCAAGTGAGATT------TCCACTACAACTGCAAATACCACTATTCCTTTAAATGCTGGTTTGGATACACATCCT------GGCCCTGATATTGCTTTA...---------------CCTGTACCTACT...---GCAGAAACCATTTTTACCCCAACTGTACCTGTACAGCCTTCTGGTCCTATATATATATATGGGTCC------------GATTTTATATTGCATCCTAGCTTGTATGTCATTCCA...---CGCAAACGTAAACGTTTGTCATAT
TRN  10010101100011000
NAM  VL2_HPV42/5-468
ASQ  R-.SRRR-KRASATQLYQTCKASGTCPPDVIPKVEGTTLADKILQWGSLGVFFGGLGIGTGAGTGGRTGYVPLG----TRPPVIAEPGPAVRPPIAVD-----------TVGPSDPSIVSLLEESS.....---.......------VIDAGITVPDITSHG---GFNITTSTGgpaSTPAILDIS----PPTNTIRVTTTTSTNPLYIDPFTLQPPL-PAEVNGRLLIS----TPTITPHS.........---YEEIPMDTFVVSTD..TT-NTFTSTPIPGPRSSARLG..-LYSRATQQ-RPVTTSAFLTSPAR--..LVTYDNPAYEGLT.EDTLVFEHPS.-IHTAPDPDFMDIVALHRPMLSS-KQGSVRVSRIGQRLSMQTRRGTRFGSRVHFFHDLSPITHS-..-..SETIELQPLSAS---------SVSA.ASnINDGLFDIYVDT-SDVNVTNT-----....-TSSIPMHGFATPRLSTTSFPTLPSMSTHSANTTIPFSFPATVH--VGPDLSV.-----VDHP.-WDSTPTSVMPQ--GNFVMVSGW----DFILHPSYFWR-.-RRRKPVPY
NAM  VL2_HPV32/5-467
ASQ  R-.SRRR-KRASATQLYQTCKASGTCPPDVIPKIEGRTWADQILKWGSTGVFFGGLGIGTGAGSGGRTGYVPIG----TRPPVVAEPGPAIRPPVVVD-----------TIGPTDPSVISLLEESA.....---.......------VIDSSIPVPTDTSHG---GFNITSSASgpsSTPAVLDIS----PPTNTIRVASTTSHNPVYSDPFTLRPSL-PVEGNGRLLTS----HPTIAPHS.........---YEEIPMDTFVVSTD..TS-NTVTSTPIPGPRPTMRLG..-LYTRVTQQ-RPVATTTFLTSPER--..LVTYDNPAYEGPA.EGTLEFEHPT.-IHEAPDSDFMDIIALHRPVLSA-RQGTVRVSRIGQRASLQTRSGARIGSRVHFFHDISPITRP-..-..SEAIELQPLGSSSTA-----VSTTA.SSaINDGLFDVYVDP----DIPPS-----....-HALPPLR--SPTHVSTVSLTSLGSVPAQTANTTVPLSLPTNIN--VGPDLSP.-----PESP.-PFISTRPVSPS--FDSVMVLGW----DFILHPSYMWR-.-KRRKPVPY
DSQ  CGA---...AGTCGCAGACGC---AAACGGGCATCTGCTACACAGTTATATCAAACATGTAAGGCCTCTGGGACATGCCCACCCGATGTAATTCCTAAGATTGAAGGTCGCACGTGGGCAGATCAAATATTAAAATGGGGCAGCACTGGTGTGTTTTTTGGGGGCCTTGGCATAGGTACCGGTGCTGGGTCAGGTGGGCGCACAGGGTATGTGCCTATAGGA------------ACACGACCGCCTGTTGTTGCAGAGCCGGGCCCTGCAATACGTCCTCCAGTGGTTGTTGAC---------------------------------ACTATTGGGCCTACTGACCCATCTGTAATTTCCTTATTGGAAGAGTCTGCA...............---------.....................------------------GTTATTGATTCTAGCATACCAGTGCCTACCGACACGTCTCATGGT---------GGGTTTAATATTACGTCCTCTGCAAGTggcccgtccTCTACACCTGCTGTATTGGACATTTCT------------CCTCCCACCAATACTATAAGGGTTGCATCTACTACGTCCCACAATCCAGTATACAGTGATCCTTTTACTTTACGGCCTTCTTTG---CCAGTAGAGGGTAATGGTAGACTCTTAACATCC------------CACCCAACAATAGCCCCTCATTCG...........................---------TATGAGGAAATTCCTATGGACACTTTTGTGGTATCCACAGAT......ACAAGT---AATACTGTTACCAGTACCCCTATTCCTGGACCTCGCCCTACTATGCGCCTTGGT......---TTATATACCAGGGTCACTCAACAA---CGTCCAGTTGCTACTACAACATTTTTAACATCTCCCGAGCGT------......TTGGTAACCTATGACAACCCTGCATATGAGGGTCCTGCT...GAGGGTACGTTGGAATTTGAACATCCCACC...---ATTCATGAGGCTCCTGATTCTGATTTTATGGATATTATTGCATTACACCGTCCTGTGCTATCTGCT---AGGCAGGGCACTGTCCGTGTCAGTCGTATTGGGCAACGGGCTTCCTTGCAAACACGTAGTGGGGCTCGTATTGGGTCTAGGGTACATTTTTTCCATGATATTAGCCCAATCACTAGGCCA---......---......TCAGAGGCTATAGAATTGCAACCTTTAGGCTCCTCCTCCACAGCT---------------GTATCTACTACTGCT...TCATCCgcaATTAATGATGGCCTGTTTGATGTTTATGTTGACCCT------------GACATACCTCCCTCA---------------............---CACGCGTTACCGCCCCTACGG------TCCCCCACACACGTGTCAACTGTTTCTTTAACTAGTCTTGGTAGTGTTCCTGCACAAACTGCAAATACAACTGTCCCTCTTTCCTTACCTACAAATATTAAT------GTAGGCCCTGACCTTTCACCT...---------------CCTGAGTCTCCG...---CCCTTTATTAGTACACGTCCTGTATCACCTTCT------TTTGACTCTGTTATGGTATTAGGATGG------------GATTTTATATTGCATCCCAGTTATATGTGGCGT---...---AAGCGCCGTAAACCTGTACCATAT
TRN  10010101100011000
NAM  VL2_HPV56/5-455
ASQ  R-.-ATRRKRASATQLYKTCKLSGTCPEDVVNKIEQKTWADKILQWGSLFTYFGGLGIGTGTGSGGRAGYVPLG----SRPS-TIVDVTPARPPIVVES-----------VGPTDPSIVTLVEESS.....---.......------VIESGAGIPNFTGSG---GFEITSSST...TTPAVLDIT----PTSSTVHVSSTHITNPLFIDPPVIEAPQ-TGEVSGNILIS----TPTSGIHS.........---YEEIPMQTFAV-HG..SGTEPISSTPIPGFRRIAAPR..-LYRKAFQQ-VKVTDPAFLDRPAT--..LVSADNPLFEGTD.-TSLAFS---.PSGVAPDPDFMNIVALHRPAFTT-RRGGVRFSRLGRKATIQTRRGTQIGARVHYYYDISPIAQA-..-..---EEIEMQPLLSANNS--------.--.-FDGLYDIYANI-DDEAPGLS-----....--SQSVATPS----AHLPIKPSTLSFASNTTNVTAPLGNVWETPFYSGPDIVL.-----PTGP.-STWPFVPQSPYDVTHDVYIQGS----SFALWPVYFFR-.RRRRKRIPY
DSQ  CGT---...---GCCACACGACGCAAACGCGCATCTGCAACACAACTATATAAAACATGTAAGTTGTCTGGTACATGTCCAGAGGATGTTGTTAATAAAATAGAGCAAAAAACATGGGCTGATAAAATATTGCAATGGGGAAGTTTATTTACATATTTTGGAGGCCTTGGCATTGGTACAGGAACTGGGTCTGGGGGTCGTGCAGGCTATGTTCCATTGGGG------------TCTAGGCCTTCC---ACAATAGTTGATGTAACTCCGGCGCGACCACCTATTGTTGTGGAATCC---------------------------------GTAGGGCCTACAGACCCTTCCATTGTTACATTAGTTGAGGAGTCCAGT...............---------.....................------------------GTTATAGAATCTGGTGCAGGGATTCCTAATTTTACTGGGTCTGGG---------GGATTTGAAATTACATCCTCATCAACA.........ACTACACCTGCCGTGTTGGATATTACA------------CCAACCTCTAGTACTGTACATGTCAGTAGTACCCATATAACCAATCCGTTATTTATTGATCCCCCTGTTATTGAGGCCCCACAA---ACAGGCGAGGTGTCTGGCAATATTTTAATTAGC------------ACACCCACATCTGGTATACATAGC...........................---------TATGAAGAAATACCTATGCAAACATTTGCTGTT---CACGGT......TCTGGTACAGAACCTATTAGTAGTACTCCTATTCCAGGCTTTAGGCGTATTGCAGCTCCTAGA......---TTATATAGAAAAGCATTTCAGCAG---GTTAAGGTAACTGACCCTGCATTTCTTGATAGACCTGCAACA------......TTAGTATCTGCTGATAATCCACTTTTTGAAGGTACTGAC...---ACATCTTTAGCTTTTTCT---------...CCGTCGGGTGTGGCTCCTGACCCTGATTTTATGAATATAGTAGCATTACATAGGCCTGCATTTACTACA---CGTAGGGGTGGTGTACGTTTTAGTAGGCTTGGCAGAAAGGCTACTATACAAACACGTAGAGGCACACAAATAGGTGCCCGTGTGCATTATTATTATGATATAAGTCCTATTGCACAGGCT---......---......---------GAGGAAATTGAAATGCAGCCATTATTGTCTGCAAATAATTCA------------------------...------...---TTTGATGGCCTATATGATATTTATGCAAATATA---GATGATGAAGCACCTGGTTTGTCT---------------............------AGCCAGTCAGTTGCTACACCTTCT------------GCACACTTACCTATAAAGCCTTCCACATTGTCTTTTGCTAGTAACACCACTAATGTAACTGCCCCTTTAGGTAATGTGTGGGAAACACCATTTTATTCAGGTCCTGACATAGTGTTG...---------------CCTACAGGCCCC...---AGTACGTGGCCCTTTGTTCCTCAGTCTCCTTATGATGTTACCCATGATGTATATATACAGGGATCC------------TCCTTTGCATTATGGCCTGTGTATTTTTTTAGA---...CGTAGGCGCCGTAAACGTATTCCCTAT
TRN  10010101110011000
NAM  VL2_HPV30/5-454
ASQ  R-.-ARRRKRASATQLYQTCKQAGTCPSDVINKIEHTTLADKILQWGSLFTFFGNLGIGTGAGSGGRAGYVPLG----TRPT-TVVDASPARPPIVVES-----------VGPTDPSIVTLVEESS.....---.......------VVNAGASFPNFTGTA---GFEVTSSST...TTPAVLDIT----PTTGSVHVSSTHFTNPSFVEPPVIEVPQ-TGEVSGHILVS----TPTSGVHS.........---YEEIPMQTFAV-HG..TGTEPISSTPIPGLRRIAAPR..-LYQRAFQQ-VKVTDPTFLTKPET--..LITVDNPVFEDAD.-TTLTFS---.PSGVAPDPDFLDIVALHRPAFTT-RRGGVRFSRLGTKATMRTRSGKQIGARVHYYYDVSPIAHT-..-..---EEIEMQPLLSANNS--------.--.-FDGLYDIYANL-DDEAPVSS-----....--HLSIATP-----SRLPTNTVPLSFSSQTTNVTIPLGKYWDVPIYSGPDIVL.-----PTGP.-TTWPYAPQAPFDTTHDVVIHGS----TFALWPVYFLR-.RRRRKHVPY
DSQ  CGG---...---GCACGCAGACGAAAACGGGCCTCTGCTACTCAGCTGTATCAAACGTGCAAGCAGGCTGGCACATGTCCATCTGATGTTATTAACAAAATTGAACACACAACTTTGGCAGATAAGATATTACAATGGGGTAGTTTGTTTACATTTTTTGGTAATTTAGGTATAGGCACTGGTGCAGGCTCTGGGGGGCGTGCTGGTTATGTTCCGTTAGGT------------ACACGGCCTACA---ACAGTTGTGGACGCATCCCCTGCTAGGCCACCTATTGTTGTTGAATCT---------------------------------GTGGGTCCTACGGACCCTTCCATTGTTACACTGGTTGAGGAGTCTAGT...............---------.....................------------------GTGGTTAATGCTGGAGCATCATTCCCTAATTTTACAGGCACTGCA---------GGCTTTGAGGTTACGTCTTCCTCTACC.........ACAACACCTGCTGTATTAGACATTACA------------CCTACCACTGGCTCTGTCCATGTTAGTAGTACCCATTTTACCAATCCCTCCTTTGTTGAACCCCCAGTTATTGAGGTTCCACAA---ACTGGGGAGGTATCCGGCCATATATTGGTTAGC------------ACTCCCACATCTGGTGTACATAGT...........................---------TATGAAGAAATACCTATGCAAACATTTGCTGTG---CATGGT......ACAGGCACTGAACCTATTAGTAGTACCCCTATTCCTGGGTTACGACGTATAGCTGCCCCTAGA......---TTGTATCAAAGGGCCTTTCAGCAG---GTAAAGGTCACTGACCCCACATTCCTTACCAAACCTGAAACA------......TTAATTACTGTGGATAATCCAGTCTTTGAGGATGCTGAC...---ACAACTTTAACCTTTTCA---------...CCATCGGGTGTGGCACCTGATCCTGACTTTTTAGATATTGTGGCTTTACACAGACCTGCCTTTACAACA---CGTAGGGGTGGTGTGCGTTTTAGTAGGCTTGGTACAAAGGCCACAATGCGCACAAGAAGTGGCAAACAAATAGGTGCTCGTGTACATTATTATTATGATGTGAGTCCTATTGCACACACT---......---......---------GAGGAAATTGAAATGCAGCCATTATTGTCTGCAAATAATTCA------------------------...------...---TTTGATGGCCTATATGATATTTATGCAAACCTT---GATGATGAGGCGCCAGTGTCATCT---------------............------CACCTATCCATTGCTACACCG---------------TCCCGGTTGCCTACCAACACTGTTCCTTTGTCCTTTAGTAGTCAAACTACCAATGTTACTATACCTTTGGGTAAATATTGGGATGTTCCTATTTATTCGGGCCCCGATATAGTATTG...---------------CCTACTGGTCCT...---ACCACATGGCCCTATGCCCCTCAGGCCCCATTTGACACTACACATGATGTGGTTATACATGGATCT------------ACATTTGCTTTATGGCCTGTATACTTTTTAAGG---...CGTAGGCGTCGTAAACATGTTCCCTAT
TRN  10010101100011000
NAM  VL2_HPV51/5-459
ASQ  R-.-ARRRKRASVTQLYSTCKAAGTCPPDVVNKVEGTTLADKILQWSGLGIFLGGLGIGTGSGSGGRTGYIPLG----GGGRPGVVDIAPARPPIIIDL-----------WHHTEPSIVNLVEDSS.....---.......------IIQSGSPIPTFTGTD---GFEITSSST...TTPAVLDIT----PSAGTVHVSSTNIENPLYIEPPSIEAPQ-SGEVS-DIYLL----VHYSGTHG.........---YEEIPMEVFASNVS..TGTEPISSTPTPGVSRIAAPR..-LYSKSYTQ-VKVTNPDFISKPST--..FVTFNNPAFEPID.-TSITFEE--.PDAVAPDPDFLDIITLHRPALTS-RRGTVRFSRLGQKATMRTRSGKQIGARVHYYHDIS---RIA..-..-PADELEMQPLLSPSNN--------.--.-YS--YDIYADL-DEAETGFIQPT--....-HTTPMSHSSLSRQLP----SLSSSMSSSYANVTIPFSTTYSVPIHTGPDVVL.-----PTSP.-TVWPYVPHTSIDTKHSIVILGG----DYYLWPYTHLL-.RKRRKRIPY
NAM  VL2_HPV26/5-463
ASQ  R-.-APRRKRASATDLYKTCKAAGTCPPDVIPKIEGSTLADKILQWSGLGIFLGGLGIGTGTGSGGRTGYIPLG----GGGRPSVVDIGPTRPPIIIEP-----------VGPTEPSIVTLVEESS.....---.......------IIQSGAPIPTFSGGN---GFELTTSSA...TTPAVLDIT----PSAGTVHVTSTNIQNPLYIEPP-IDIPQ-AGEASGHIFTT----TSTAGTHS.........---YEEIPMEVFASTNG..TGLEPISSTPIPGIQRVSAPR..-LYSKAYQQ-VKVTDPNFIGNPST--..FVTFDNPAYEPID.-ETLTYAS--.SSTVAPDPDFLDIIALHRPALTS-RKGTVRYSRLGQKATMKTRSGKQIGATVHYYHDISPIQSFA..-..-EHEEIELQPLHTSTHS--------.--.-SAPLFDIYADP-DTVPS-----I--....-HTPRMSYSPTTLPVPRYASNVFSSINTSTTNVTVPLSTSFELPVYSGSDIYT.-----PTSS.-PTWPSLPPPPTTNLPAIVVHGD----NYYLWPYIYLI-.HKRRKRMPY
DSQ  CGT---...---GCCCCTCGACGCAAACGAGCATCAGCTACAGACTTATACAAAACATGTAAGGCCGCTGGTACGTGCCCTCCTGATGTTATTCCTAAAATTGAAGGTTCTACCCTTGCTGATAAGATATTACAATGGAGTGGTTTGGGAATATTTTTAGGTGGTCTTGGTATAGGTACAGGAACTGGGTCTGGTGGGCGTACTGGATACATTCCCCTAGGA------------GGGGGTGGTAGACCCTCTGTTGTGGATATCGGCCCTACCCGTCCGCCCATTATTATTGAACCT---------------------------------GTGGGTCCTACAGAACCTTCTATAGTTACTTTGGTGGAGGAATCTAGT...............---------.....................------------------ATTATACAATCTGGAGCCCCTATACCTACATTTAGTGGTGGCAAT---------GGCTTTGAACTTACCACATCCTCTGCA.........ACAACACCTGCTGTGTTGGACATCACC------------CCCTCTGCTGGTACTGTACATGTAACAAGTACCAATATACAAAATCCATTATATATTGAACCCCCT---ATAGATATACCACAG---GCCGGGGAAGCATCAGGTCATATATTTACTACA------------ACGTCCACAGCTGGCACACATAGT...........................---------TATGAAGAAATTCCAATGGAAGTATTTGCTTCTACTAATGGA......ACAGGATTAGAACCTATTAGTAGTACACCTATTCCTGGTATACAACGAGTGTCAGCTCCTCGT......---TTGTATAGTAAGGCCTATCAACAG---GTAAAGGTTACAGATCCCAATTTTATTGGTAATCCCTCCACA------......TTTGTTACCTTTGATAATCCTGCATATGAACCTATAGAT...---GAAACACTTACATATGCTTCC------...AGTAGTACTGTAGCACCTGACCCCGATTTTTTGGACATTATTGCATTGCATCGTCCGGCCCTTACATCT---CGCAAAGGTACTGTACGCTATAGTAGGTTGGGTCAAAAGGCCACTATGAAAACACGTAGTGGAAAACAAATTGGAGCTACAGTACATTATTATCATGATATTAGTCCTATACAGTCTTTTGCT......---......---GAACACGAAGAAATTGAATTGCAGCCTTTACATACATCTACCCATTCA------------------------...------...---TCTGCACCTTTGTTTGATATATATGCAGACCCT---GATACAGTTCCTAGC---------------ATA------............---CATACGCCGCGCATGTCATATTCCCCTACAACATTACCAGTTCCAAGATATGCCTCCAATGTGTTTTCCTCTATTAATACTTCCACTACCAATGTTACTGTGCCTTTATCCACCTCATTTGAACTACCTGTATATAGTGGGTCAGACATTTACACG...---------------CCCACATCTTCC...---CCGACATGGCCATCATTGCCCCCCCCACCCACCACTAACTTACCTGCAATAGTTGTGCATGGGGAT------------AATTATTATTTATGGCCCTATATTTATTTAATC---...CATAAACGCCGTAAACGTATGCCTTAT
TRN  10010101110011000
NAM  VL2_HPV39/5-461
ASQ  R-.-AARRKRASATDLYRTCKQSGTCPPDVVDKVEGTTLADKILQWTSLGIFLGGLGIGTGTGTGGRTGYIPLG----GRPN-TVVDVSPARPPVVIEP-----------VGPSEPSIVQLVEDSS.....---.......------VITSGTPVPTFTGTS---GFEITSSST...TTPAVLDIT----PSSGSVQITSTSYTNPAFTDPSLIEVPQ-TGETSGNIFVS----TPTSGTHG.........---YEEIPMEVFAT-HG..TGTEPISSTPTPGISRVAGPR..-LYSRAHQQ-VRVSNFDFVTHPSS--..FVTFDNPAFEPVD.-TTLTYE---.AADIAPDPDFLDIVRLHRPALTS-RKGTVRFSRLGKKATMVTRRGTQIGAQVHYYHDISSIAPA-..-..-ESIELQPLVHAEPSDA--------.--.-SDALFDIYA-D-VDNNTYLD-----....-TAFNNTRDSGTTYNTGSLPSVASSASTKYANTTIPFSTSWNMPVNTGPDIAL.-----PSTT.-PQLPLVPSGPIDTTYAITIQGS----NYYLLPLLYFF-.LKKRKRIPY
DSQ  CGT---...---GCTGCCAGGCGTAAGCGTGCATCTGCAACTGACCTATATAGAACCTGTAAACAATCGGGTACCTGTCCACCAGACGTTGTTGATAAAGTTGAGGGTACTACACTTGCTGACAAAATTTTACAGTGGACTAGTTTAGGTATATTTTTGGGTGGGTTAGGCATAGGCACAGGTACTGGTACTGGGGGACGCACAGGATATATACCCCTGGGG------------GGTAGGCCTAAT---ACTGTTGTAGATGTGTCTCCTGCACGTCCACCTGTAGTTATTGAACCT---------------------------------GTTGGTCCTTCTGAGCCATCTATTGTGCAATTGGTGGAGGACTCAAGT...............---------.....................------------------GTTATAACCTCTGGAACACCAGTACCAACATTTACAGGCACCTCT---------GGATTTGAAATTACTTCTTCTTCTACT.........ACTACGCCTGCGGTATTGGATATTACA------------CCCTCCTCTGGGTCTGTACAAATAACCTCTACTAGTTATACTAACCCTGCCTTTACGGATCCTTCCTTAATTGAGGTTCCCCAA---ACAGGTGAAACCTCGGGTAATATATTTGTCAGT------------ACCCCTACATCAGGTACACATGGC...........................---------TATGAGGAAATACCTATGGAAGTGTTTGCCACA---CATGGC......ACAGGTACCGAACCTATTAGCAGCACACCTACACCTGGAATCAGTCGTGTGGCAGGACCACGT......---TTATATAGTAGAGCACATCAGCAG---GTTCGTGTTAGTAATTTTGATTTTGTAACTCACCCTTCATCA------......TTTGTAACATTTGATAATCCTGCTTTTGAGCCTGTTGAT...---ACTACATTAACATATGAA---------...GCTGCTGACATAGCTCCAGATCCGGATTTTCTGGACATTGTTCGTTTACATAGGCCTGCCTTAACCTCG---CGTAAAGGAACAGTAAGGTTTAGTAGGCTTGGCAAAAAGGCTACCATGGTTACCCGGCGTGGCACACAAATTGGAGCGCAAGTACATTATTACCATGACATTAGTAGTATTGCTCCTGCT---......---......---GAAAGCATTGAATTACAGCCCCTAGTTCACGCTGAGCCCTCTGATGCT------------------------...------...---TCAGATGCATTATTTGATATATATGCT---GAT---GTGGACAATAACACATATTTAGAT---------------............---ACTGCATTTAATAATACAAGGGATTCGGGCACTACATATAACACAGGCTCACTACCTTCTGTGGCTTCTTCAGCATCTACTAAATATGCCAATACAACTATTCCTTTTAGTACCTCATGGAATATGCCTGTAAATACTGGTCCTGATATTGCTTTA...---------------CCAAGTACTACT...---CCACAGTTGCCATTGGTGCCTTCTGGACCAATAGACACAACATATGCAATAACCATTCAGGGTTCC------------AATTATTATTTGTTGCCATTATTGTATTTTTTC---...CTAAAAAAACGTAAACGTATTCCCTAT
TRN  10010101100011000
NAM  VL2_HPV18/5-453
ASQ  R-.-AARRKRASVTDLYKTCKQSGTCPPDVVPKVEGTTLADKILQWSSLGIFLGGLGIGTGSGTGGRTGYIPLG----GRSN-TVVDVGPTRPPVVIEP-----------VGPTDPSIVTLIEDSS.....---.......------VVTSGAPRPTFTGTS---GFDITSAGT...TTPAVLDIT----PSSTSVSISTTNFTNPAFSDPSIIEVPQ-TGEVAGNVFVG----TPTSGTHG.........---YEEIPLQTFAS-SG..TGEEPISSTPLPTVRRVAGPR..-LYSRAYQQ-VSVANPEFLTRPSS--..LITYDNPAFEPVD.-TTLTFD---.PRSDVPDSDFMDIIRLHRPALTS-RRGTVRFSRLGQRATMFTRSGTQIGARVHFYHDISPIAPSP..-..-EYIELQPLVSATEDN---------.--.---DLFDIYADD-MDPAVPVP-----....-SRSTTSFA-----FFKYSPTISS--ASSYSNVTVPLTSSWDVPVYTGPDITL.-----PSTT.-SVWPIVSPTAPASTQYIGIHGT----HYYLWPLYYFI-.PKKRKRVPY
DSQ  CGT---...---GCCGCACGACGCAAACGGGCTTCGGTAACTGACTTATATAAAACATGTAAACAATCTGGTACATGTCCACCTGATGTTGTTCCTAAGGTGGAGGGCACCACGTTAGCAGATAAAATATTGCAATGGTCAAGCCTTGGTATATTTTTGGGTGGACTTGGCATAGGTACTGGCAGTGGTACAGGGGGTCGTACAGGGTACATTCCATTGGGT------------GGGCGTTCCAAT---ACAGTGGTGGATGTTGGTCCTACACGTCCCCCAGTGGTTATTGAACCT---------------------------------GTGGGCCCCACAGACCCATCTATTGTTACATTAATAGAGGACTCCAGT...............---------.....................------------------GTGGTTACATCAGGTGCACCTAGGCCTACGTTTACTGGCACGTCT---------GGGTTTGATATAACATCTGCGGGTACA.........ACTACACCTGCGGTTTTGGATATCACA------------CCTTCGTCTACCTCTGTGTCTATTTCCACAACCAATTTTACCAATCCTGCATTTTCTGATCCGTCCATTATTGAAGTTCCACAA---ACTGGGGAGGTGGCAGGTAATGTATTTGTTGGT------------ACCCCTACATCTGGAACACATGGG...........................---------TATGAGGAAATACCTTTACAAACATTTGCTTCT---TCTGGT......ACGGGGGAGGAACCCATTAGTAGTACCCCATTGCCTACTGTGCGGCGTGTAGCAGGTCCCCGC......---CTTTACAGTAGGGCCTACCAACAA---GTGTCAGTGGCTAACCCTGAGTTTCTTACACGTCCATCCTCT------......TTAATTACATATGACAACCCGGCCTTTGAGCCTGTGGAC...---ACTACATTAACATTTGAT---------...CCTCGTAGTGATGTTCCTGATTCAGATTTTATGGATATTATCCGTCTACATAGGCCTGCTTTAACATCC---AGGCGTGGGACTGTTCGCTTTAGTAGATTAGGTCAACGGGCAACTATGTTTACCCGCAGCGGTACACAAATAGGTGCTAGGGTTCACTTTTATCATGATATAAGTCCTATTGCACCTTCCCCA......---......---GAATATATTGAACTGCAGCCTTTAGTATCTGCCACGGAGGACAAT---------------------------...------...---------GACTTGTTTGATATATATGCAGATGAC---ATGGACCCTGCAGTGCCTGTACCA---------------............---TCGCGTTCTACTACCTCCTTTGCA---------------TTTTTTAAATATTCGCCCACTATATCTTCT------GCCTCTTCCTATAGTAATGTAACGGTCCCTTTAACCTCCTCTTGGGATGTGCCTGTATACACGGGTCCTGATATTACATTA...---------------CCATCTACTACC...---TCTGTATGGCCCATTGTATCACCCACGGCCCCTGCCTCTACACAGTATATTGGTATACATGGTACA------------CATTATTATTTGTGGCCATTATATTATTTTATT---...CCTAAGAAACGTAAACGTGTTCCCTAT
TRN  10010101100011000
NAM  VL2_HPV27/3-455
ASQ  R-.-AKRRKRASPTDLYRTCKQAGTCPPDIIPRLEQNTLADKILKWGSLGVFFGGLGIGTGSGTGGRTGYIPVG----TRPTTVVDIGVAPKPPVVIEP-----------VGASEPSIVTLVEDSS.....---.......------IINAGASHPTFTGTG---GFEVTTSTV...TDPAVLDIT----PSGTSVQVSSSSFLNPLYTEPAIVEAPQ-TGEVSGHVLVS----TATSGSHG.........---YEEIPMQTFATSGG..SGQEPISSTPLPGVRRVAGPR..-LYSRANQQ-VQVRDPAFLERPAD--..LVTFDNPVYDP-E.-ETIIFQHP-.DFHEPPDPDFLDIVALHRPALTS-RQGTVRFSRLGRRATLRTRSGKQIGARVHFYHDISPVVPD-..-..--ELEMEPLLPPASTVG--------.--.-SDVLYDVYADP-DVLQPLDDYYP--....-AP-RG--------SLANTTVSASSASTLRGSTTAPLSGGVDVPVYTGPDIEP.-----PVVP.-GLGPLIPVAPSLPSSVYIFGG-----DYYLLPSYILWP.-KRRKRVNY
DSQ  CGT---...---GCCAAGCGTCGGAAACGCGCCTCCCCCACCGACCTCTATCGTACATGCAAGCAGGCAGGTACCTGCCCCCCAGACATTATTCCAAGGCTAGAACAAAACACCTTGGCAGATAAAATATTAAAGTGGGGCAGCCTAGGGGTCTTCTTTGGCGGTCTTGGTATAGGCACTGGCAGTGGCACGGGGGGACGTACCGGGTATATTCCTGTAGGT------------ACCAGGCCGACCACTGTGGTTGATATTGGTGTGGCACCCAAGCCACCTGTTGTTATTGAACCT---------------------------------GTGGGGGCCTCAGAGCCCTCTATAGTCACTTTGGTAGAGGACTCCAGC...............---------.....................------------------ATCATAAATGCAGGCGCTTCCCATCCCACCTTCACTGGTACAGGT---------GGGTTCGAGGTTACAACTTCCACCGTT.........ACAGACCCCGCTGTCTTGGATATCACC------------CCCTCAGGTACCAGTGTGCAGGTCAGCAGCAGTAGCTTTTTGAACCCACTATACACTGAACCCGCAATTGTGGAGGCTCCTCAA---ACAGGGGAGGTATCTGGCCATGTACTTGTTAGT------------ACAGCCACTTCAGGGTCTCACGGC...........................---------TATGAGGAGATACCAATGCAGACCTTTGCTACGTCAGGTGGA......AGTGGTCAAGAGCCCATAAGTAGCACACCCCTTCCTGGCGTGCGTAGGGTTGCAGGGCCCCGC......---TTGTACAGTAGGGCAAATCAGCAG---GTGCAAGTCAGGGATCCTGCGTTTCTGGAAAGGCCTGCTGAT------......TTGGTAACATTTGACAACCCTGTGTATGACCCA---GAG...---GAGACCATAATATTTCAGCATCCA---...GACTTTCATGAGCCACCGGATCCTGATTTCTTGGACATTGTGGCTTTGCATCGTCCTGCCCTTACGTCC---AGACAAGGCACAGTCCGTTTCAGTAGATTGGGACGCAGGGCCACACTTCGCACCCGTAGTGGTAAACAGATTGGGGCTCGGGTGCACTTCTATCATGATATCAGCCCTGTCGTCCCTGAT---......---......------GAATTGGAGATGGAGCCATTGTTACCCCCAGCTTCTACTGTAGGA------------------------...------...---TCAGATGTTTTATATGATGTTTATGCTGATCCT---GATGTCCTGCAGCCATTGGACGATTACTACCCA------............---GCCCCT---CGCGGC------------------------TCCCTGGCTAATACCACGGTATCTGCCTCCTCTGCATCTACACTGCGAGGGTCCACTACAGCCCCTCTCTCGGGTGGTGTTGATGTGCCTGTGTATACTGGGCCTGATATTGAACCA...---------------CCCGTTGTTCCT...---GGTTTGGGGCCCCTCATTCCTGTGGCTCCATCGTTGCCATCCTCTGTTTACATATTTGGGGGG---------------GATTATTATTTACTGCCAAGTTATATCCTGTGGCCT...---AAACGACGTAAACGTGTCAACTAT
TRN  10010101100011000
NAM  VL2_HPV03/5-464
ASQ  R-.-ARRRKRASATQLYRTCKAAGTCPPDVIPKVEGTTLADRILQWGSLGVYLGGLGIGTGSGTGGRTGYAPIS----TRPGTVVDVSVPAKPPVVIEP-----------VGPSDPSIVNLLEDSS.....---.......------IINSGSTIPTFTGTD---GFEVISSAT...TTPAVLDIT----PASDNVVVSSTNFSNPAFTEPSLLEVPQ-NGEVSGHILIS----TPTSGTHG.........---YEEIPMETFAS-PG..TGTEPISSTPVPGVSRIAGPR..-LYSKAVTQ-VKVTDPAFLTRPRS--..LMTFDNPVFEPED.-ETIIFERPY.SPSQVPDSDFLDILRLHRPALTS-RRGTVRYSRVGQKLSMRTRSGKGLGARVHYYQDLSPIGPT-..-..-EDIEMEPLIAPASASA--------.--.-YDSLYDVYADV-DDADIGFTSGG--....-RSDTLSRG------RATVSPLSSTLSTKYGNVTIPFVSPVDVPLQPGPDILL.-----PAS-.-AQWPFVPLSPVDTTHYVYIDGG----DFYLWPVTFFLPrRRRRKRVSY
DSQ  CGT---...---GCAAGGCGTCGCAAGCGTGCATCTGCCACACAGCTTTATAGAACCTGCAAGGCCGCAGGCACATGTCCCCCTGATGTTATTCCCAAAGTTGAGGGCACCACTTTGGCCGATCGTATTTTGCAATGGGGTAGCTTGGGTGTTTATTTGGGGGGTCTGGGCATTGGTACTGGATCCGGAACTGGGGGGCGCACAGGGTATGCGCCAATTAGT------------ACACGGCCTGGTACTGTTGTTGATGTTAGTGTTCCTGCAAAACCTCCTGTGGTAATTGAGCCT---------------------------------GTGGGGCCATCGGACCCCTCCATTGTTAACCTATTGGAAGACTCCAGT...............---------.....................------------------ATTATTAATTCCGGGTCCACCATACCGACCTTTACTGGTACTGAT---------GGATTCGAAGTTATTTCTTCAGCCACA.........ACTACCCCTGCTGTATTAGATATTACA------------CCTGCCAGTGACAATGTGGTGGTTAGTAGTACCAATTTTAGCAATCCAGCTTTTACAGAACCTTCCCTGTTGGAGGTTCCTCAG---AATGGTGAGGTTTCAGGGCACATACTTATTAGC------------ACCCCCACATCTGGTACACATGGT...........................---------TATGAAGAAATTCCTATGGAAACCTTTGCTTCG---CCAGGT......ACGGGAACTGAACCTATTAGTAGCACCCCTGTACCTGGTGTAAGTAGAATTGCAGGTCCCCGC......---CTATATAGCAAAGCTGTCACACAG---GTTAAGGTAACAGATCCTGCTTTCTTGACCCGTCCTCGCTCG------......TTAATGACATTTGACAATCCTGTGTTTGAGCCAGAAGAT...---GAGACTATAATATTTGAACGTCCGTAC...TCTCCCTCACAGGTGCCTGACTCTGACTTCCTTGACATTTTACGTTTGCACAGGCCTGCTTTAACTTCT---CGTAGGGGTACTGTGCGTTACAGTAGGGTAGGCCAAAAATTAAGCATGCGCACTCGCAGTGGCAAGGGTCTTGGTGCTCGAGTGCATTATTATCAAGATTTAAGCCCCATAGGTCCTACG---......---......---GAGGACATTGAAATGGAACCCTTGATTGCTCCTGCATCTGCCTCAGCC------------------------...------...---TATGACTCTCTGTATGATGTGTATGCAGATGTG---GACGATGCTGACATAGGTTTTACATCTGGAGGT------............---CGTAGTGACACTCTGTCTAGAGGC------------------CGTGCTACAGTGTCCCCCCTGTCCTCCACTCTGTCCACAAAGTATGGCAATGTCACCATTCCCTTTGTGTCTCCTGTGGATGTGCCTTTACAACCTGGGCCTGATATTTTACTG...---------------CCTGCATCA---...---GCTCAGTGGCCGTTTGTTCCCTTGTCTCCTGTTGACACAACTCATTATGTCTACATAGATGGCGGG------------GATTTTTATCTATGGCCTGTCACCTTCTTTTTGCCCcgaCGTCGTCGCCGTAAACGTGTCTCATAT
TRN  10010101100011000
NAM  VL2_HPV63/3-504
ASQ  R-.-VRKR-RAAPQDIYPACKVANNCPPDIQNKIEQTTVADKILQYGSLGIFLGGLGIGTGKGGGGRYGYTPLGDSG---AVRVGGRSTPVRPTVPVETVGPRDILPIDSLDPLGPSVIELEDI--.....---.......---PATTVEVVAEVHPIS-DTPQIPAPTTDESS...-S-AVLHIP-QESPAART--ITRSQYNNPLFRITASADIASGEASASDNIFIDVDTPGQIVGQEIp........LVNFDMGPISTEG--EL..ETEFT-TSTPRTTQVQERPTR..-FYNRRYYEQVPVTAPEFITRPA--S..LVTFENPAFERS-.-VSLIFEQDLeDILNAPDQDFRDIVYLSRPTYSRAPDGRMRLSRLGRRATISTRSGVTIGAQSHFYMDISSISSN-..-..-DGIELQTLGEASGETVVQSSLAASdPIeAEHSFIEPAPSIDSYDIVSLQS----....ETYSDEHLLDMYEPVGSSLQLQISDVRGRPTVIDIPFRPR-RPP--LGPINAG.VDIYSPTAS.VGSPTINPTDLDIPLIIIHLDNS--TGDYDLHPSLRKR-.---RKLVHI
DSQ  AGA---...---GTACGTAAACGA---CGAGCTGCTCCACAAGATATTTATCCTGCTTGTAAGGTTGCAAACAATTGCCCCCCTGATATACAAAATAAAATTGAACAAACAACAGTTGCTGACAAGATTTTACAATATGGGAGTTTGGGAATATTCCTGGGAGGTTTGGGTATTGGTACTGGCAAGGGTGGGGGTGGCCGGTATGGTTATACACCTCTAGGGGACAGTGGT---------GCGGTGCGAGTTGGTGGCAGAAGTACACCTGTAAGACCAACAGTACCTGTGGAGACTGTAGGACCAAGGGATATATTACCTATAGATTCATTGGATCCTTTAGGGCCCTCAGTCATTGAACTAGAAGATATT------...............---------.....................---------CCAGCCACAACAGTGGAAGTAGTGGCTGAAGTGCATCCCATATCT---GATACTCCACAAATACCGGCACCTACTACTGATGAATCTAGT.........---TCA---GCTGTTCTTCATATTCCA---CAAGAAAGTCCTGCTGCACGTACA------ATCACACGTTCCCAATACAATAATCCTTTATTCAGGATCACAGCTAGTGCAGACATAGCATCAGGTGAAGCTTCAGCATCTGATAATATTTTTATAGATGTAGATACGCCGGGTCAAATAGTAGGACAAGAAATAcca........................CTAGTTAATTTTGATATGGGACCTATATCTACTGAAGGT------GAGCTT......GAAACTGAGTTCACA---ACTAGTACACCAAGAACCACACAAGTACAGGAAAGGCCTACACGT......---TTCTATAATAGACGCTATTATGAACAAGTGCCAGTTACTGCACCTGAATTTATCACAAGGCCTGCT------TCC......TTAGTTACTTTTGAGAATCCTGCATTTGAAAGGAGT---...---GTTTCTTTGATTTTTGAACAAGATTTAgaaGATATTTTAAATGCTCCTGATCAGGATTTTAGAGACATTGTTTATTTAAGCAGACCAACATACAGTCGTGCCCCTGATGGCCGCATGCGCCTAAGCCGCCTGGGACGCAGAGCCACTATAAGTACCAGAAGTGGTGTTACTATAGGTGCTCAATCACACTTTTATATGGATATTAGCTCTATCTCCTCAAAT---......---......---GATGGCATTGAGTTACAAACACTGGGTGAAGCTTCTGGCGAGACTGTGGTGCAAAGTTCTCTTGCTGCATCGgatCCTATTgaaGCAGAACATTCATTCATTGAACCAGCACCATCTATAGATAGTTATGATATTGTTTCACTTCAGTCT------------............GAGACTTATTCAGATGAACATTTGTTAGATATGTATGAACCTGTAGGTTCTTCCTTGCAATTACAAATATCAGACGTCAGAGGTCGGCCAACTGTTATTGATATTCCCTTTAGACCCCGC---AGGCCTCCA------TTAGGTCCTATAAATGCTGGT...GTTGATATCTATAGTCCAACTGCTAGT...GTTGGATCACCTACTATAAATCCTACTGATCTTGACATTCCATTAATTATTATACATTTAGATAATTCA------ACAGGGGATTATGATTTACATCCAAGTTTGCGTAAACGT---...---------CGCAAATTAGTTCATATT
TRN  10010101100011000
NAM  VL2_HPV1A/3-507
ASQ  R-.-LRRK-RAAPKDIYPSCKISNTCPPDIQNKIEHTTIADKILQYGSLGVFLGGLGIGTARGSGGRIGYTPLGEGG---GVRVATRPTPVRPTIPVETVGPSEIFPIDVVDPTGPAVIPLQDLGR.....---.......-DFPIPTVQVIAEIHPIS-DIPNIVASSTNEGE...-S-AILDVL-RGNATIRT--VSRTQYNNPSFTVASTSNISAGEASTSDIVFVSNGSGDRVVGEDIp........LVELNLGLETDTSSVVQ..ETAFS-SSTPIAERPSFRPSR..-FYNRRLYEQVQVQDPRFVEQPQ--S..MVTFDNPAFEPELdEVSIIFQRDLdALAQTPVPEFRDVVYLSKPTFSREPGGRLRVSRLGKSSTIRTRLGTAIGARTHFFYDLSSIAPE-..-..-DSIELLPLGEHSQTTVISSNLG--.--.-DTAFIQGETAEDDLEVISLETP---....QLYSEEELLDTNESVGENLQLTITNSEGEVSILDLTQSRV-RPP--FGTEDTS.LHVYYPNSS.KGTPIINPEESFTPLVIIALNNS--TGDFELHPSLRKR-.---RKRAYV
DSQ  CGC---...---CTACGTAGAAAA---CGCGCTGCCCCCAAAGATATATACCCCTCATGCAAAATATCAAACACCTGCCCACCTGACATTCAAAATAAAATTGAGCATACAACAATTGCTGATAAAATATTGCAATATGGCAGTCTGGGAGTTTTTTTGGGAGGTTTGGGCATTGGAACAGCCAGAGGCTCTGGAGGAAGAATTGGTTATACTCCCCTCGGTGAGGGTGGT---------GGGGTTAGAGTTGCTACTCGTCCAACTCCAGTAAGGCCTACAATACCTGTGGAAACAGTAGGCCCCAGTGAAATTTTCCCCATAGATGTTGTAGATCCTACAGGCCCTGCTGTTATTCCCCTACAAGATTTAGGTAGA...............---------.....................---GACTTCCCAATACCAACTGTGCAGGTTATTGCAGAAATTCACCCTATTTCT---GACATACCAAACATTGTTGCATCTTCAACAAATGAAGGAGAA.........---TCT---GCCATATTAGATGTGTTA---CGAGGGAATGCAACCATACGCACT------GTTTCAAGAACACAATACAATAACCCCTCTTTCACTGTTGCATCTACATCTAATATAAGTGCTGGAGAAGCATCAACATCAGATATTGTATTTGTTAGCAATGGTTCAGGTGACAGGGTGGTGGGCGAGGATATCccc........................TTGGTAGAATTAAACTTAGGCCTTGAAACAGACACATCTTCTGTTGTACAA......GAAACAGCATTTTCC---AGCAGCACACCAATTGCTGAAAGACCCTCTTTTAGGCCCTCAAGA......---TTCTATAATAGGCGTCTATATGAACAGGTGCAAGTACAAGACCCTAGGTTCGTTGAGCAGCCACAG------TCA......ATGGTCACTTTTGATAATCCAGCATTTGAGCCAGAGCTTgatGAGGTGTCTATTATCTTCCAAAGAGACTTAgatGCTCTTGCTCAGACACCAGTGCCTGAATTTAGAGATGTAGTTTATCTGAGCAAGCCCACATTTTCGCGGGAACCAGGGGGACGGTTAAGGGTTAGCCGCCTTGGCAAAAGTTCAACTATTCGTACACGCCTGGGCACAGCAATTGGCGCCAGAACCCACTTTTTCTATGATTTAAGTTCTATTGCTCCAGAA---......---......---GACTCAATTGAATTATTGCCTTTAGGTGAGCATAGTCAAACAACAGTCATTAGTTCCAACTTAGGT------...------...---GACACAGCATTTATACAAGGTGAGACAGCAGAGGATGACTTAGAAGTTATCTCTTTAGAAACACCA---------............CAATTATATTCAGAAGAAGAGCTTTTAGACACAAACGAAAGTGTGGGCGAAAATTTGCAACTTACTATTACTAACTCAGAGGGTGAGGTTTCTATACTAGATTTAACACAAAGCAGAGTC---AGGCCACCT------TTTGGCACTGAAGATACTAGC...TTGCATGTATATTACCCAAATTCTTCT...AAAGGGACTCCAATAATTAATCCTGAAGAATCATTTACACCTTTGGTTATTATAGCTCTTAACAACTCA------ACAGGGGATTTTGAGTTACATCCTAGTCTTAGAAAGCGT---...---------CGTAAAAGAGCTTATGTA
TRN  10010101100011000
NAM  VL2_HPV49/3-521
ASQ  R-.-ARRTKRDSVTNIYRTCKQAGNCPPDVVNKVEQTTIADQILKFGSTGVFFGGLGIGTGRGTGGSTGYVPIGEGP---AIRVGGTPSVVRPGILPEAIGPADIIPIDTVNPIDPNASSVVPLTD.....-TG.......PDLLPGTIETIAEVNPAP-DIPRVDTSVVTTSR...GSSAVLEVASEPTPPTRTR-ISRTQYHNPSFQILTESTPSLGESALTDHVVVTSGSGGQPIGGVT.......pvEIELQELPSRYTFEIEE..PTPPRRSSTPLRNITQAVGNLrrSLYNRRLTQQVNVQDPLFLQQPSRLV..RFAFDNPVFEEE-.-VTQIFERDVaAVEEPPDRDFLDIAKLSRPLYSETPQGYVRVSRLGNRASIRTRSGATVGAQVHFYTDLSTIDAE-..-..-ESIELSLLGEHSGDATIVQGPV--.--.-ESSFVDLNVQE-LPQVIEVDPEP--....TFHSDDLLLDEQNEDFSGSQLVYG-SGRRSTTFTVPRFSTPRSDTFYVQDLEG.YAVSYPERR.NYPEIIYPQP-DLPTVIIHTADT--SGDFYLHPSLRRR-.--KRKRTYL
DSQ  CGT---...---GCTCGCAGAACAAAGCGAGATTCTGTAACAAACATTTACAGAACCTGCAAACAGGCAGGAAACTGTCCTCCGGATGTTGTTAATAAAGTGGAACAAACTACAATTGCTGACCAAATATTAAAATTTGGCAGCACTGGTGTGTTTTTTGGTGGTTTGGGAATAGGTACAGGCCGTGGTACCGGTGGCAGTACTGGCTATGTACCTATAGGTGAAGGCCCA---------GCAATACGTGTTGGGGGCACTCCAAGTGTTGTTCGTCCAGGTATACTCCCTGAGGCTATTGGTCCGGCGGATATCATTCCTATTGATACTGTCAATCCAATTGATCCAAATGCATCATCTGTGGTCCCACTCACTGAC...............---ACAGGA.....................CCTGATTTGCTACCTGGGACAATTGAGACTATTGCAGAAGTGAACCCTGCCCCA---GATATTCCTAGAGTTGACACATCTGTTGTCACAACAAGCAGA.........GGCTCCAGTGCTGTATTGGAGGTTGCCTCTGAACCCACACCACCCACTCGCACCAGA---ATTTCCAGAACACAGTACCATAATCCCTCTTTTCAAATATTAACTGAATCTACACCCTCTTTGGGAGAATCTGCATTAACTGATCATGTTGTTGTTACTAGTGGTTCTGGTGGTCAACCAATAGGTGGAGTTACA.....................ccagttGAAATAGAATTACAAGAACTTCCTAGCAGATATACTTTTGAAATAGAGGAA......CCTACACCACCAAGACGCTCTAGTACCCCACTACGCAACATCACACAAGCTGTAGGAAATTTAagaagaTCACTATATAATAGGCGACTTACTCAACAAGTAAATGTCCAGGATCCATTATTCTTACAACAGCCCTCACGTTTAGTT......CGCTTTGCCTTTGATAATCCTGTGTTTGAAGAAGAA---...---GTTACACAAATATTTGAAAGGGACGTAgcaGCTGTAGAAGAACCTCCAGACAGAGACTTTTTAGATATAGCAAAATTAAGCCGCCCTCTTTACTCTGAAACACCACAGGGATATGTCAGGGTAAGCCGCTTAGGTAATAGGGCTTCTATTAGAACACGTAGTGGAGCTACAGTAGGGGCTCAAGTGCATTTTTATACAGATCTTAGCACAATCGATGCAGAG---......---......---GAGTCTATAGAGTTATCACTATTAGGGGAACATTCTGGTGATGCTACTATTGTCCAAGGCCCAGTA------...------...---GAAAGCTCATTTGTAGATTTAAATGTTCAGGAA---CTGCCTCAAGTAATAGAAGTAGACCCAGAACCT------............ACTTTCCACTCTGATGATTTGCTACTGGATGAGCAAAATGAAGATTTTTCTGGCTCCCAGTTAGTTTATGGT---AGTGGCAGGCGTTCTACCACATTTACTGTACCCCGCTTCTCTACTCCCAGATCTGATACCTTTTATGTACAAGATTTGGAAGGT...TATGCTGTGTCATATCCTGAACGAAGG...AATTATCCAGAAATTATTTATCCTCAACCC---GATTTGCCAACTGTAATAATTCATACTGCAGATACC------TCTGGGGACTTCTATTTACATCCAAGCCTTCGCAGGCGA---...------AAACGTAAACGCACTTATTTA
TRN  10010101100011000
NAM  VL2_HPV14/3-519
ASQ  R-.-ARRVKRDSATNIYRTCKQAGTCPPDVINKVESTTIADKILQYGSAGVFFGGLGISTGKGTGGTTGYVPLGEGP---AVRVGGAPTIIRPALVPDTIGPSDIIPVDTLDPVEPTTSSIVPLTD.....STG.......PDLLPGEVETIAEVHPGP-SRPPTDTPVTTSTG...GSSAILEVAPEPTPPSRVR-VTRTQYHNPSFQVITESTPTTGESSLADNILVTSGSGGQTIGGAT.......peLIELQELPSRYSFEIEE..PTPPRRTSTPLQRIQTAIRRR.gGLTNRRLVQQVSVENPLFLTRPSRLV..QFQFDNPAFEEE-.-VTQIFEQDIeDFNEPPDRDFLDVQRLGRPQYSETPAGYLRVSRLGQRRTIRTRSGAQIGSQVHFYRDLSSINTE-..-..-DPIELQLLGQHSGDATIVQGPV--.--.-ESTFVDINVDE-NPLSEDFS-----....-AHSDDLLLDEANEDFSGSQLVVG-NRRSTSSYTVPRFETTRSGSYYAQDTKG.YYVAYPEDRdISMDIIYPTP-ELPVVIIHTYDT--SGDFYLHPSLHKRL.--KRKRKYL
DSQ  CGT---...---GCTAGGCGAGTCAAGCGTGACTCTGCTACTAACATTTACAGAACCTGCAAGCAAGCAGGCACGTGTCCTCCTGATGTCATTAATAAAGTTGAAAGCACAACTATTGCTGATAAAATTTTGCAGTATGGTAGTGCTGGTGTTTTTTTTGGGGGTTTGGGCATAAGCACTGGAAAAGGTACAGGAGGTACCACAGGCTATGTGCCTTTGGGAGAGGGCCCA---------GCAGTACGTGTTGGTGGTGCGCCAACAATTATCAGACCTGCTCTGGTCCCAGACACCATTGGTCCATCAGATATTATACCTGTGGACACCTTAGATCCAGTGGAGCCTACGACCTCTTCTATTGTTCCACTCACGGAT...............TCCACAGGA.....................CCAGACCTTTTGCCTGGCGAGGTGGAAACTATTGCAGAGGTGCATCCTGGCCCG---TCTAGGCCTCCTACTGACACTCCTGTCACAACTAGTACAGGA.........GGCTCCAGTGCTATATTAGAAGTAGCACCGGAACCTACTCCGCCCTCACGTGTTAGG---GTGACCCGGACACAATATCATAATCCCTCCTTTCAAGTAATTACCGAATCCACCCCTACCACAGGTGAAAGTTCATTAGCAGACAATATATTGGTTACCTCTGGTTCTGGGGGACAAACTATTGGAGGCGCTACA.....................cctgaaCTTATAGAACTTCAAGAGTTACCATCTAGATATTCATTTGAAATCGAAGAA......CCAACACCCCCTAGAAGAACTAGTACCCCATTACAAAGGATACAGACAGCTATAAGAAGGAGG...ggtGGGCTTACAAATAGGCGCTTAGTCCAACAAGTTTCTGTAGAAAACCCCTTATTTTTAACAAGACCATCTAGACTAGTG......CAATTTCAGTTTGATAATCCAGCATTTGAGGAGGAA---...---GTAACACAAATATTTGAACAAGATATTgaaGATTTTAATGAGCCTCCAGACAGAGATTTTCTAGATGTTCAAAGGCTGGGTAGGCCCCAATATTCAGAAACTCCAGCAGGGTATCTCCGAGTTAGTCGTCTTGGGCAAAGGCGGACTATACGCACTCGTTCTGGAGCACAAATTGGGTCTCAAGTTCATTTTTATAGAGATCTAAGTAGTATAAACACAGAA---......---......---GATCCTATTGAGCTTCAATTATTAGGTCAGCATTCTGGGGATGCTACTATTGTCCAAGGTCCAGTT------...------...---GAAAGCACATTTGTAGACATAAATGTAGATGAA---AATCCACTTTCTGAGGATTTTAGT---------------............---GCACATTCTGATGACTTGCTTTTAGATGAAGCTAATGAAGACTTTAGTGGCTCTCAATTAGTTGTGGGT---AATCGACGCTCAACATCTTCATATACCGTCCCTCGTTTTGAAACAACCAGATCTGGGTCATATTATGCACAGGATACAAAAGGT...TATTATGTAGCTTATCCTGAGGATAGGgacATTAGCATGGATATTATTTATCCTACCCCA---GAGTTGCCTGTTGTCATTATTCACACATATGATACA------AGTGGTGATTTTTACCTGCATCCTAGTCTTCACAAAAGACTC...------AAAAGAAAACGAAAATATTTG
TRN  10010101100011000
NAM  VL2_HPV05/3-518
ASQ  R-.-AKTVKRDSVTHIYQTCKQAGTCPPDVINKVEQTTVADNILKYGSAGVFFGGLGISTGRGTGGATGYVPLGEGP---GVRVGGTPTVVRPSLVPETIGPVDILPIDTVNPVEPTASSVVPLTE.....STG.......ADLLPGEVETIAEIHPVP-EGPSVDTPVVTTST...GSSAVLEVAPEPIPPTRVR-VSRTQYHNPSFQIITESTPAQGESSLADHVLVTSGSGGQRIGGDI.......tdIIELEEIPSRYTFEIEE..PTPPRRSSTPLPRNQSVGRRRgfSLTNRRLVQQVQVDNPLFLTQPSKLV..RFAFDNPVFEEE-.-VTNIFENDLdVFEEPPDRDFLDVRELGRPQYSTTPAGYVRVSRLGTRATIRTRSGAQIGSQVHFYRDLSSINTE-..-..-DPIELQLLGQHSGDATIVHGPV--.--.-ESTFIDMDISE-NPLSESIE-----....-AYSHDLLLDETVEDFSGSQLVIG-NRRSTNSYTVPRFETTRNGSYYTQDTKG.YYVAYPESR.NNAEIIYPTP-DIPVVIIHPHDS--TGDFYLHPSLHRR-.--KRKRKYL
DSQ  CGT---...---GCAAAAACGGTCAAGCGAGACTCTGTAACTCATATTTACCAAACCTGCAAACAGGCAGGCACTTGCCCCCCTGATGTTATTAATAAAGTGGAACAAACAACAGTTGCTGACAATATTTTAAAATATGGCAGTGCTGGTGTATTTTTTGGTGGCCTTGGTATTAGTACAGGCCGAGGAACTGGGGGTGCTACAGGGTACGTGCCACTTGGGGAAGGTCCT---------GGTGTCCGTGTCGGAGGAACCCCCACGGTTGTAAGGCCTTCCTTGGTTCCTGAAACAATCGGGCCCGTTGATATTTTGCCCATTGATACAGTTAACCCCGTGGAACCTACAGCATCATCCGTGGTCCCTCTAACTGAG...............TCCACAGGC.....................GCTGATTTACTTCCAGGTGAAGTAGAAACAATTGCTGAAATCCATCCTGTACCT---GAGGGGCCATCAGTGGATACCCCTGTAGTTACCACTAGCACA.........GGTTCCAGTGCTGTTTTAGAGGTTGCCCCAGAGCCTATTCCTCCAACACGGGTCAGG---GTTTCACGCACACAGTATCACAATCCATCTTTTCAAATAATAACTGAGTCTACTCCAGCACAAGGGGAATCGTCTCTTGCAGATCACGTTTTGGTGACATCGGGTTCTGGGGGGCAACGAATAGGGGGTGATATA.....................actgacATAATTGAGTTAGAGGAAATTCCTAGTAGGTATACATTTGAAATTGAAGAA......CCAACTCCTCCACGCCGCAGCAGTACTCCATTGCCACGCAATCAATCTGTAGGCCGTAGGAGGggtttcTCTTTGACTAATAGACGTTTAGTACAGCAGGTACAAGTGGACAATCCATTGTTTCTAACTCAACCATCTAAGTTAGTT......CGTTTTGCATTTGATAATCCTGTTTTTGAGGAAGAA---...---GTGACTAATATATTTGAAAATGATCTGgatGTCTTTGAAGAACCTCCAGACAGAGATTTTCTTGATGTTAGGGAATTGGGACGTCCACAATATTCTACAACACCAGCGGGATATGTTAGAGTAAGCAGGTTGGGGACTCGAGCCACTATTCGCACTCGCTCTGGTGCACAGATAGGGTCGCAAGTCCATTTTTACAGAGATCTTAGCTCTATTAATACTGAA---......---......---GATCCTATTGAATTACAATTATTAGGCCAACATTCAGGTGATGCTACTATAGTCCACGGACCTGTT------...------...---GAAAGCACATTTATAGATATGGATATTTCTGAA---AATCCATTATCTGAAAGCATTGAA---------------............---GCATATTCACATGATTTATTATTAGATGAAACGGTGGAAGATTTCAGTGGGTCTCAGCTGGTTATAGGT---AATCGAAGGAGCACAAACTCTTACACTGTTCCTAGGTTTGAAACTACAAGAAATGGTTCATACTATACACAAGACACAAAGGGA...TATTATGTTGCATATCCAGAGTCACGT...AATAATGCAGAAATCATTTATCCTACACCT---GATATTCCTGTAGTCATTATACACCCTCATGACAGT------ACAGGGGACTTTTATTTACATCCCAGTCTTCACAGGCGC---...------AAACGTAAAAGAAAATATTTG
TRN  10010101100011000
NAM  VL2_HPV15/3-533
ASQ  R-.-ARRVKRASVTDIYRGCKQAGTCPPDVLNKVEQTTIADKILKYGSAAVFFGGLGIGTGRGSGGATGYVPLGEGP---GVRVGGTPTIVRPGVTPELIGPADVIPIDTVTPIDPAAPSIVTITD.....SSA.......VDLLP-ELETIAEIHPVPTDNVDIDTPVVTGGR...DSSAILEVA-DPSPPVRTR-VSRTQYHNPSFQIITESTPLSGESALADHVIVFEGSGGQNIGGSRsaaldaaqeSFEMQTWPSRYSFEIQE..GTPPR-SSTPVQRAVQSLSSLrrALYNRRLTEQVAVTDPLFLGRPSRLV..QFQFDNPTFEEE-.-VTQTFERDVeAFEEPPDRQFLDVVRLGRPTYSETPQGYVRVSRLGRRATIRTRSGAQVGAQVHFYRDLSTIDSE-..-..-A-LEMQLLGEHSGDSTIVQAPM--.--.-ESSFIDINIDEPDSLHVGLQDS-TEaddiDYNSADLLLEDNIEDFSGSHLVFGNTRRSTTTYTVPRFESPRNTGFYIQDVHG.YNVAYPESR.DTTEIILPQS-DTPTVVINFEEA--GGDYYLHPSLKTR-.--KRKRKYL
DSQ  CGT---...---GCACGCAGAGTAAAACGTGCATCTGTAACTGACATTTACAGGGGGTGCAAACAAGCAGGTACCTGCCCCCCTGATGTTCTTAATAAAGTGGAACAAACAACTATTGCAGATAAAATTTTGAAATATGGAAGTGCTGCTGTATTTTTTGGTGGGCTGGGAATTGGTACAGGCCGTGGTTCAGGTGGTGCTACAGGTTATGTTCCTTTGGGAGAAGGCCCT---------GGTGTGCGCGTAGGAGGCACCCCTACCATTGTTCGCCCTGGGGTCACACCTGAACTTATTGGTCCAGCGGATGTAATACCAATTGATACAGTCACACCAATTGACCCCGCAGCACCTAGTATTGTCACAATAACTGAC...............AGCAGCGCT.....................GTTGACCTTTTACCT---GAATTGGAGACAATTGCAGAAATACATCCTGTACCAACAGATAATGTAGATATTGATACTCCTGTTGTTACAGGAGGTCGG.........GATTCCAGCGCTATTTTAGAAGTTGCT---GATCCCAGTCCTCCTGTACGAACAAGA---GTGTCTCGCACACAATATCATAACCCATCATTTCAAATTATTACTGAGTCTACACCTTTGTCTGGCGAATCTGCACTAGCAGATCACGTTATTGTTTTTGAAGGTAGTGGAGGTCAAAATATAGGCGGTTCTCGCagtgctgctttggatgcagcacaggaaAGTTTTGAAATGCAAACATGGCCTAGTAGATACAGTTTTGAAATACAAGAA......GGTACACCACCAAGA---TCTAGCACTCCTGTTCAAAGAGCAGTACAATCCCTTTCTAGTCTTagaaggGCTTTATATAACAGACGGCTGACTGAACAAGTAGCTGTAACAGACCCTTTATTCTTGGGACGACCCTCACGCTTGGTG......CAATTTCAATTTGACAATCCAACATTTGAAGAAGAA---...---GTAACACAAACTTTTGAAAGAGATGTTgaaGCATTTGAAGAGCCTCCAGATAGGCAATTTCTAGATGTAGTTCGCCTAGGAAGGCCTACTTATTCTGAAACACCACAAGGTTATGTGCGTGTAAGTAGACTTGGTAGACGGGCCACAATTAGAACCAGAAGTGGTGCACAAGTTGGTGCTCAAGTACATTTCTATAGGGATTTAAGTACAATTGATTCTGAA---......---......---GCA---TTAGAAATGCAATTACTAGGAGAACATTCAGGTGATAGTACCATTGTTCAGGCTCCTATG------...------...---GAAAGTTCATTTATAGATATAAATATTGATGAGCCTGATTCATTACATGTGGGCCTACAGGACAGT---ACTGAAgcagatgacattGATTACAATTCTGCTGATCTTCTTTTAGAAGATAATATAGAAGATTTTAGTGGTTCTCATTTGGTGTTTGGCAATACACGGCGCAGCACTACAACATATACAGTACCTAGATTTGAATCACCTAGAAATACTGGGTTTTACATACAAGATGTGCATGGG...TATAATGTAGCCTATCCGGAGTCCCGT...GATACTACCGAAATAATATTACCACAATCT---GACACGCCAACTGTAGTTATAAATTTTGAAGAGGCA------GGTGGAGACTATTATTTACATCCAAGCTTAAAAACACGT---...------AAACGAAAACGCAAATATTTG
TRN  10010101100011000
NAM  VL2_HPV09/3-533
ASQ  R-.-AKRTKRASVTDIYRGCKAAGTCPPDVINKVEHTTIADKILQYGSAGVFFGGLGISTGRGTGGATGYVPLGEGP---GVRVGGTPTIVRPGVIPEIIGPTDLIPLDTVRPIDPTAPSIVTGTD.....-ST.......VDLLPGEIESIAEIHPVPVDNAVVDTPVVTEGRr..GSSAILEVA-DPSPPMRTR-VARTQYHNPAFQIISESTPMSGESSLADHIIVFEGSGGQLVGGPR.esytasseNIELQEFPSRYSFEIDE..GTPPR-TSTPVQRAVQSLSSLrrALYNRRLTEQVAVTDPLFLSRPSRLV..QFQFDNPAFEDE-.-VTQIFERDLsTVEEPPDRQFLDVQRLSRPLYTETPQGYVRVSRLGRRATIRTRSGAQVGAQVHFYRDLSTINTE-..-..-EPIEMQLLGEHSGDSTIVQGPV--.--.-ESSIVDVNIDEPDGLEVGRQETP-SvedvDFNSEDLLLDEGVEDFSGSQLVVG-TRRSTNTLTVPRFETPRDTSFYIQDIQG.YTVSYPESR.QTTDIIFPHP-DTPTVVIHINDT--SGDYYLHPSLQRK-.--KRKRKYL
DSQ  CGT---...---GCAAAACGTACTAAACGTGCCTCTGTTACAGATATATACAGAGGCTGCAAAGCTGCTGGTACATGTCCACCAGATGTAATTAATAAAGTGGAGCACACAACTATTGCTGATAAAATTTTGCAATATGGAAGTGCTGGTGTGTTTTTCGGGGGCTTGGGAATAAGTACAGGCCGTGGCACTGGTGGTGCCACTGGCTATGTTCCATTAGGGGAAGGGCCA---------GGAGTCCGTGTAGGTGGCACCCCCACTATAGTTCGCCCTGGGGTGATACCTGAAATAATTGGCCCAACTGATCTAATTCCTTTAGACACAGTCAGACCAATTGACCCCACAGCACCCAGTATTGTCACAGGCACTGAC...............---AGCACT.....................GTTGACCTTTTACCTGGTGAAATAGAATCAATTGCTGAGATACACCCAGTACCAGTGGACAATGCTGTAGTAGATACTCCAGTTGTAACAGAAGGTAGAaga......GGCTCGTCTGCCATTTTAGAGGTGGCT---GACCCAAGCCCTCCTATGCGAACCCGT---GTTGCACGAACTCAATACCATAATCCAGCTTTTCAAATTATTTCTGAGTCTACACCTATGTCAGGTGAATCTTCCTTAGCAGATCATATTATAGTTTTTGAAGGATCTGGGGGCCAGCTAGTAGGTGGTCCTAGG...gaatcatacacagcatcttctgaaAACATAGAATTACAAGAATTTCCTAGTAGATATAGTTTTGAAATAGATGAA......GGAACACCTCCTCGG---ACTAGTACACCTGTCCAAAGAGCAGTACAATCATTATCTAGTCTGcgtagaGCTCTATATAACAGACGTCTTACAGAACAAGTGGCTGTGACAGATCCATTATTTTTAAGTAGGCCTTCTCGTTTAGTT......CAATTTCAGTTTGATAATCCAGCATTTGAAGATGAG---...---GTCACACAAATATTTGAAAGAGATCTAagtACTGTTGAGGAGCCTCCAGATAGGCAATTTTTAGATGTACAACGCCTTAGTAGGCCTTTATATACAGAAACACCTCAGGGATATGTTCGGGTTAGTAGACTAGGCCGAAGAGCAACAATCCGCACACGTAGTGGTGCACAGGTGGGCGCACAGGTTCATTTCTACAGGGACTTAAGCACCATTAACACAGAA---......---......---GAACCTATAGAAATGCAATTATTGGGGGAACACTCAGGTGACAGTACCATAGTACAAGGCCCAGTT------...------...---GAAAGTTCAATTGTTGATGTTAATATTGATGAACCTGATGGTTTGGAGGTGGGAAGACAGGAAACCCCT---TCTgttgaagatgtgGATTTTAATTCTGAAGACTTACTGTTAGATGAGGGTGTAGAAGATTTTAGTGGGTCTCAGCTAGTCGTTGGC---ACACGCCGCAGTACAAATACATTAACAGTGCCACGCTTTGAAACTCCAAGGGACACTAGTTTTTATATTCAGGATATACAAGGC...TACACAGTGTCCTATCCCGAGTCTAGA...CAAACCACAGATATAATTTTTCCACATCCT---GACACCCCCACAGTAGTAATCCACATCAATGATACA------TCAGGAGATTATTATTTACACCCAAGTCTCCAAAGGAAA---...------AAACGCAAACGCAAATATTTA
TRN  10010101100011000
NAM  VL2_HPV04/3-520
ASQ  S-.-LSRRKRDSVPNLYAKCQLSGNCLPDVKNKVEADTLADRLLRWLGSVIYLGGLGIGTGRGSGGSTGYNPIGAP-----SRVTPSGTLVRPTVPVESLGPSEIIPIDAIDPTTSSVVPLEDLTIpdvtvDSGdtrgigeTTLQPAQVDISTSHDPISDVTGASSHPTIISGEd..NAIAVLDVSPIEPPTKRIALATRGASATPHVSVISGTTEFG--QSSDLNVFVNATFSGDSIGYTE.........--EIPLEPLNPFQEFEI..ESPPK-TSTPRDVLNRAIGRAr.DLYNRRVQQ-IPTRNPALLTQPSRAI..VFGFENPAFDAD-.-ITQTFERDLeQVAAAPDADFADIVTIGRPRFSETDAGQIRVSRLGRRGTIKTRSGVQIGQAVHFYYDLSTIDTA-..-..-DAIELSTLGQHSGEQSIVDAMI--.--.-ESSLIDPFEMP-DPTFTEEQ-----....------QLLDPLTEDFSQSHLVLTSSRRG-TSFTIPTIPPGLGLRIYVDDVGSdLFVSYPESR.VIPAGGLPTEPFVPLEPALLSDI-FSTDFVYRPSLYRK-.--KRKRLEM
DSQ  AGC---...---TTGAGTAGAAGGAAAAGAGATTCAGTTCCAAATCTTTATGCAAAATGTCAACTGTCTGGCAATTGCCTACCTGATGTAAAAAATAAAGTAGAAGCTGATACTCTTGCTGATCGTTTGCTGAGATGGTTGGGAAGTGTAATATACCTAGGAGGCTTGGGTATTGGTACTGGGAGAGGTAGTGGGGGGTCAACTGGGTATAATCCAATTGGAGCTCCA---------------AGTAGAGTCACACCTAGTGGTACTTTAGTAAGGCCTACAGTGCCTGTGGAAAGTTTGGGACCCTCAGAAATAATCCCAATAGATGCAATAGACCCAACAACATCTTCTGTTGTGCCATTAGAGGATCTGACCATCccagatgtcacagtaGATAGTGGAgatacaagaggaataggggagACTACTCTTCAGCCTGCACAAGTAGATATTTCAACATCACATGACCCTATATCAGATGTCACTGGTGCTAGCAGCCACCCTACAATCATATCTGGCGAGgat......AACGCCATTGCAGTGTTAGATGTGTCCCCTATAGAACCTCCCACAAAACGGATAGCATTGGCAACTAGGGGAGCCTCAGCAACTCCACATGTAAGTGTCATATCTGGCACAACCGAATTCGGT------CAGTCATCTGATCTGAATGTATTTGTGAATGCCACATTTTCAGGCGATTCCATTGGTTATACAGAA...........................------GAAATTCCATTAGAACCGTTGAACCCCTTTCAAGAATTCGAAATA......GAAAGCCCTCCAAAA---ACTAGTACACCACGTGACGTTTTAAATCGTGCAATAGGAAGAGCAcgg...GATTTATATAATAGAAGGGTTCAGCAA---ATACCTACTAGGAACCCAGCTTTACTGACACAGCCTTCCCGCGCAATA......GTATTTGGATTTGAAAATCCCGCCTTTGATGCTGAC---...---ATCACTCAAACATTTGAGCGGGATTTAgaaCAGGTTGCAGCAGCTCCAGATGCTGACTTTGCAGACATAGTCACTATAGGGCGTCCAAGGTTTTCAGAGACAGATGCTGGTCAAATTAGAGTTAGCAGGCTTGGACGCCGAGGCACAATAAAAACTAGAAGTGGTGTGCAAATTGGGCAGGCGGTTCATTTTTATTACGACCTAAGTACAATAGATACTGCT---......---......---GATGCTATTGAATTATCTACTTTAGGTCAACATTCAGGAGAACAAAGCATTGTTGATGCTATGATA------...------...---GAAAGCAGCTTAATAGATCCTTTTGAAATGCCC---GATCCTACTTTTACAGAAGAACAA---------------............------------------CAGCTTTTAGATCCACTTACAGAAGATTTTAGTCAGTCACACTTGGTGCTTACTAGTAGCAGACGTGGG---ACATCATTTACTATACCTACAATACCACCTGGATTAGGTCTTAGAATTTATGTAGATGATGTAGGTTCTgatTTATTTGTTTCCTATCCAGAATCTAGA...GTAATACCTGCTGGAGGTTTACCAACTGAGCCATTTGTTCCTCTAGAACCAGCTTTGTTATCTGATATA---TTTAGTACGGATTTTGTATATCGTCCTAGTTTATATCGCAAG---...------AAACGGAAACGATTAGAAATG
TRN  10010101100011000
NAM  VL2_CRPVK/4-480
ASQ  R-.--SRKRRAAPQDIYPTCKIAGNCPADIQNKFENKTIADKILQYGSLGVFFGGLGISSAGGSGGRLGYTPLS-----GGGGRVIAAAPVRPPITTESVGPLDIVP-EVADPGGPTLVSLHELP-.....---.......------AETPYVSSTNVTGDG--AAEPLPAGHG...-GSQISDVT-----SGTSGTVSRTHINNPVFEAPMTGDQDVSDVHVFAHSESS-ITINQTENTGG.........-ELIEMVPLRHPPRSEGdfRETSFSTSTPIPDRSALRSIN..-VASRRYQQ-VQVENPAFLNRPRELVqfENTFDNPAFVDDE.QLSLLFEQDLdTVVATPDPAFQDVVRLSRPSFTQSRAGRVRVSRLGRTLTMQTRSGKAFGPAKHFYYELSSIAEG-..-..---PEPDILIPESEQ----------.--.-ETSFTDATSKD-TQQEAEVY-----....--ADGSTLETDTSADENLTLVFSDRGRGQGSHVPIPGKSTIGGPVNIGDSKYY.-----TLNP.-GETTSFEADVISPVFIFEGNADG---TYYLEEPLRKK-.--RRKS-IF
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