EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF00444 - Ribosomal_L36)
FAM  PF00444
PID  Ribosomal_L36
DES  Ribosomal protein L36
IPR  IPR000473
ANO  9
ALN  38
AID  0.640676
APH  (((((RK36_EPIVI/1-37:0.09456,RK36_PINTH/1-37:0.18932):0.10993,(RL36_BACST/1-37:0.13319,RL36_MYCTU/1-37:0.15532):0.10134):0.06412,RK36_PEA/1-37:0.03579):0.04727,(RK36_ASTLO/1-37:0.30821,RK36_EUGGR/1-37:0.24640):0.15036):0.29614,RL36_MYCSP/1-37:0.20381,RL36_ECOLI/1-38:0.16624);
ATP  (((((RK36_EPIVI/1-37,RK36_PINTH/1-37),(RL36_BACST/1-37,RL36_MYCTU/1-37)),RK36_PEA/1-37),(RK36_ASTLO/1-37,RK36_EUGGR/1-37)),RL36_MYCSP/1-37,RL36_ECOLI/1-38);
ATL  2.32298
DNO  7
DLN  114
DID  0.619477
DPH  (RK36_PINTH/1-37:0.20408,(((RK36_EUGGR/1-37:0.23636,RK36_ASTLO/1-37:0.18457):0.05200,(RL36_MYCSP/1-37:0.25561,RL36_ECOLI/1-38:0.30309):0.18550):0.18907,RK36_PEA/1-37:0.07553):0.07084,RK36_EPIVI/1-37:0.12334);
DTP  (RK36_PINTH/1-37,(((RK36_EUGGR/1-37,RK36_ASTLO/1-37),(RL36_MYCSP/1-37,RL36_ECOLI/1-38)),RK36_PEA/1-37),RK36_EPIVI/1-37);
DTL  1.87999
RID  0.623138
RPH  ((RK36_PEA/1-37:0.03150,((RL36_ECOLI/1-38:0.16574,RL36_MYCSP/1-37:0.20443):0.29654,(RK36_EUGGR/1-37:0.25147,RK36_ASTLO/1-37:0.30455):0.14652):0.05564):0.17022,RK36_EPIVI/1-37:0.05478,RK36_PINTH/1-37:0.23876);
RTP  ((RK36_PEA/1-37,((RL36_ECOLI/1-38,RL36_MYCSP/1-37),(RK36_EUGGR/1-37,RK36_ASTLO/1-37))),RK36_EPIVI/1-37,RK36_PINTH/1-37);
RTL  1.92015
LNK  RK36_ASTLO/1-37:P24355:AJ294725
LNK  RK36_EPIVI/1-37:P30069:M81884
LNK  RK36_EUGGR/1-37:P21532:Z11874
LNK  RK36_PEA/1-37:P07815:Y00468
LNK  RK36_PINTH/1-37:P41631:D17510
LNK  RL36_BACST/1-37:P07841:
LNK  RL36_ECOLI/1-38:P21194:M12432
LNK  RL36_MYCSP/1-37:P38015:L23478
LNK  RL36_MYCTU/1-37:P45810:
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  RL36_MYCTU/1-37
ASQ  MKVNPSVKPICDKCRLIRRHGRVMVICS.DPRHKQRQG
NAM  RL36_BACST/1-37
ASQ  MKVRPSVKPICEKCKVIRRRGKVMVICE.NPKHKQRQG
NAM  RK36_PINTH/1-37
ASQ  MKIRASIRRICGKCRPIRRRKRVMIICS.NPRHKQKQG
DSQ  ATGAAAATTCGTGCTTCTATTCGTAGAATTTGTGGAAAATGTCGACCAATTCGTAGACGGAAACGAGTTATGATAATTTGTTCT...AATCCGAGACATAAGCAAAAACAGGGG
TRN  10010101110011011
NAM  RK36_PEA/1-37
ASQ  MKVAASVRKICEKCRLIRRRGRLLVICS.NPKHKQRQG
DSQ  ATGAAAGTGGCGGCCTCTGTTCGTAAAATTTGTGAAAAATGTCGATTGATCCGTAGGCGAGGTCGACTTCTAGTAATTTGTTCC...AATCCAAAACATAAACAAAGACAAGGA
TRN  10010101110011011
NAM  RK36_EPIVI/1-37
ASQ  MKIRASIRKICEKCRLICRRRRIIVICS.NPRHKQRQG
DSQ  ATGAAAATAAGAGCTTCCATTCGTAAAATTTGTGAAAAGTGTAGGTTAATCTGTAGGCGTAGGCGCATTATAGTAATTTGTTCC...AACCCGAGACATAAACAACGGCAAGGA
TRN  10010101110011010
NAM  RL36_ECOLI/1-38
ASQ  MKVRASVKKLCRNCKIVKRDGVIRVICSaEPKHKQRQG
DSQ  ATGAAAGTTCGTGCTTCCGTCAAGAAATTATGCCGTAACTGCAAAATCGTTAAGCGTGATGGTGTCATCCGTGTGATTTGCAGTgccGAGCCGAAGCATAAACAGCGCCAAGGC
TRN  11111101111011010
NAM  RL36_MYCSP/1-37
ASQ  MKVRASIKRICKDCKIIKRHGVNRVICI.NFKHKQRQG
DSQ  ATGAAAGTTAGAGCATCGATTAAACGTATTTGCAAAGACTGTAAAATAATTAAAAGACATGGTGTTAATAGAGTAATCTGTATT...AACTTTAAACATAAACAAAGACAAGGA
TRN  10010101110011011
NAM  RK36_EUGGR/1-37
ASQ  MKIRSSVKKICNKCYLIRRKNNLLVVCI.NNKHKQRQG
DSQ  ATGAAAATACGTTCTTCTGTTAAAAAAATTTGTAATAAATGTTATTTGATTCGTCGCAAAAACAATCTTTTAGTTGTTTGTATA...AATAACAAGCATAAACAACGACAGGGT
TRN  10010101110011010
NAM  RK36_ASTLO/1-37
ASQ  MKVYSSVRKICKSCGLIRRHGKLFVRCI.NSKHNQRQN
DSQ  ATGAAAGTATATTCTTCTGTTAGAAAAATTTGTAAAAGTTGTGGTTTAATTCGTCGTCATGGTAAATTATTTGTAAGGTGTATT...AATTCAAAACATAATCAGCGACAAAAT
TRN  10110101110011000
//