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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF00345 - Pili_assembly_N)
FAM  PF00345
PID  Pili_assembly_N
DES  Gram-negative pili assembly chaperone, N-terminal domain
IPR  IPR001829
ANO  20
ALN  149
AID  0.371898
APH  (((((((((((MRKB_KLEPN/20-146:0.40379,YEHC_ECOLI/34-157:0.57336):0.02001,(HIFB1_HAEIN/29-156:0.41048,FIMB_BORPE/28-155:0.39882):0.06031):0.07463,ECPD_ECOLI/26-152:0.40156):0.31315,(CLPE_ECOLI/35-151:0.61158,FANE_ECOLI/20-137:0.49435):0.18523):0.05028,PAPD_ECOLI/22-142:0.65104):0.14306,((YRAI_ECOLI/25-145:0.46774,LPFB_SALTY/25-144:0.29232):0.04605,(FIMC_ECOLI/37-157:0.24073,FIMC_SALTY/26-146:0.29148):0.22414):0.11684):0.15807,YHCA_ECOLI/21-136:1.45845):0.29606,SEFB_SALEN/41-166:0.55954):0.11218,(CS31_ECOLI/30-155:0.56864,CAF1M_YERPE/36-171:0.40091):0.06978):0.12246,(MYFB_YEREN/43-175:0.23426,PSAB_YERPS/44-174:0.18287):0.23556):0.27653,AGGD_ECOLI/36-166:0.21124,NFAE_ECOLI/49-179:0.23777);
ATP  (((((((((((MRKB_KLEPN/20-146,YEHC_ECOLI/34-157),(HIFB1_HAEIN/29-156,FIMB_BORPE/28-155)),ECPD_ECOLI/26-152),(CLPE_ECOLI/35-151,FANE_ECOLI/20-137)),PAPD_ECOLI/22-142),((YRAI_ECOLI/25-145,LPFB_SALTY/25-144),(FIMC_ECOLI/37-157,FIMC_SALTY/26-146))),YHCA_ECOLI/21-136),SEFB_SALEN/41-166),(CS31_ECOLI/30-155,CAF1M_YERPE/36-171)),(MYFB_YEREN/43-175,PSAB_YERPS/44-174)),AGGD_ECOLI/36-166,NFAE_ECOLI/49-179);
ATL  11.5734
DNO  20
DLN  447
DID  0.462052
DPH  ((((((((YRAI_ECOLI/25-145:0.38412,(((CLPE_ECOLI/35-151:0.39573,FANE_ECOLI/20-137:0.44877):0.07514,PAPD_ECOLI/22-142:0.47607):0.07606,((ECPD_ECOLI/26-152:0.39246,((FIMB_BORPE/28-155:0.35152,HIFB1_HAEIN/29-156:0.37425):0.05976,MRKB_KLEPN/20-146:0.30451):0.06885):0.04480,YEHC_ECOLI/34-157:0.43028):0.12193):0.09087):0.08049,((FIMC_ECOLI/37-157:0.26478,FIMC_SALTY/26-146:0.35264):0.09013,LPFB_SALTY/25-144:0.32041):0.04901):0.15239,YHCA_ECOLI/21-136:0.78834):0.16217,CS31_ECOLI/30-155:0.44092):0.06505,CAF1M_YERPE/36-171:0.31753):0.04727,SEFB_SALEN/41-166:0.48229):0.08412,(MYFB_YEREN/43-175:0.25918,PSAB_YERPS/44-174:0.17199):0.18891):0.24414,AGGD_ECOLI/36-166:0.11938,NFAE_ECOLI/49-179:0.35301);
DTP  ((((((((YRAI_ECOLI/25-145,(((CLPE_ECOLI/35-151,FANE_ECOLI/20-137),PAPD_ECOLI/22-142),((ECPD_ECOLI/26-152,((FIMB_BORPE/28-155,HIFB1_HAEIN/29-156),MRKB_KLEPN/20-146)),YEHC_ECOLI/34-157))),((FIMC_ECOLI/37-157,FIMC_SALTY/26-146),LPFB_SALTY/25-144)),YHCA_ECOLI/21-136),CS31_ECOLI/30-155),CAF1M_YERPE/36-171),SEFB_SALEN/41-166),(MYFB_YEREN/43-175,PSAB_YERPS/44-174)),AGGD_ECOLI/36-166,NFAE_ECOLI/49-179);
DTL  9.1689
RID  0.371898
RPH  (((((((((((MRKB_KLEPN/20-146:0.40379,YEHC_ECOLI/34-157:0.57336):0.02001,(HIFB1_HAEIN/29-156:0.41048,FIMB_BORPE/28-155:0.39882):0.06031):0.07463,ECPD_ECOLI/26-152:0.40156):0.31315,(CLPE_ECOLI/35-151:0.61158,FANE_ECOLI/20-137:0.49435):0.18523):0.05028,PAPD_ECOLI/22-142:0.65104):0.14306,((YRAI_ECOLI/25-145:0.46774,LPFB_SALTY/25-144:0.29232):0.04605,(FIMC_ECOLI/37-157:0.24073,FIMC_SALTY/26-146:0.29148):0.22414):0.11684):0.15807,YHCA_ECOLI/21-136:1.45845):0.29606,SEFB_SALEN/41-166:0.55954):0.11218,(CS31_ECOLI/30-155:0.56864,CAF1M_YERPE/36-171:0.40091):0.06978):0.12246,(MYFB_YEREN/43-175:0.23426,PSAB_YERPS/44-174:0.18287):0.23556):0.27653,AGGD_ECOLI/36-166:0.21124,NFAE_ECOLI/49-179:0.23777);
RTP  (((((((((((MRKB_KLEPN/20-146,YEHC_ECOLI/34-157),(HIFB1_HAEIN/29-156,FIMB_BORPE/28-155)),ECPD_ECOLI/26-152),(CLPE_ECOLI/35-151,FANE_ECOLI/20-137)),PAPD_ECOLI/22-142),((YRAI_ECOLI/25-145,LPFB_SALTY/25-144),(FIMC_ECOLI/37-157,FIMC_SALTY/26-146))),YHCA_ECOLI/21-136),SEFB_SALEN/41-166),(CS31_ECOLI/30-155,CAF1M_YERPE/36-171)),(MYFB_YEREN/43-175,PSAB_YERPS/44-174)),AGGD_ECOLI/36-166,NFAE_ECOLI/49-179);
RTL  11.5734
LNK  AGGD_ECOLI/36-166:P46004:U12894
LNK  CAF1M_YERPE/36-171:P26926:X61996
LNK  CLPE_ECOLI/35-151:Q05433:L05180
LNK  CS31_ECOLI/30-155:P15483:X16944
LNK  ECPD_ECOLI/26-152:P33128:D26562
LNK  FANE_ECOLI/20-137:P25402:X56001
LNK  FIMB_BORPE/28-155:P33409:X64876
LNK  FIMC_ECOLI/37-157:P31697:U14003
LNK  FIMC_SALTY/26-146:P37923:L19338
LNK  HIFB1_HAEIN/29-156:P35757:X66606
LNK  LPFB_SALTY/25-144:P43661:AE008868
LNK  MRKB_KLEPN/20-146:P21646:M55912
LNK  MYFB_YEREN/43-175:P33407:Z21953
LNK  NFAE_ECOLI/49-179:P46738:S61968
LNK  PAPD_ECOLI/22-142:P15319:X61239
LNK  PSAB_YERPS/44-174:P69966:L76301
LNK  SEFB_SALEN/41-166:P33387:L11009
LNK  YEHC_ECOLI/34-157:P33342:U00007
LNK  YHCA_ECOLI/21-136:P28722:U18997
LNK  YRAI_ECOLI/25-145:P42914:U18997
AMK  xxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.......xxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  ECPD_ECOLI/26-152
ASQ  DIVISGTRVIYK.SDQKSVNVRLEN-KGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTAS...TSLPKDRESVFWFNVLEVPPKPD----AEKVANQS-.......-LLQLAFRT----RIKLFYRPDGLK
DSQ  GACATTGTCATTTCGGGTACTCGCGTAATATATAAA...AGCGATCAAAAAAGTGTCAACGTACGTCTGGAAAAT---AAAGGGAATAACCCGTTGCTTGTCCAGAGTTGGTTAGATACTGGCGATGACAACGCTGAGCCTGGCAGTATTACAGTCCCTTTTACTGCTACGCCGCCAGTATCGCGTATTGATGCCAAACGTGGGCAAACAATCAAATTAATGTACACAGCCAGC.........ACCTCACTGCCTAAAGACAGAGAGAGCGTGTTCTGGTTTAACGTACTGGAAGTTCCACCAAAACCAGAT------------GCAGAAAAGGTCGCGAATCAAAGC---.....................---CTGCTGCAACTGGCATTTCGCACA------------CGTATAAAACTTTTCTATCGCCCGGATGGATTGAAG
TRN  10010101100011000
NAM  MRKB_KLEPN/20-146
ASQ  NIIVNGTRFIYP.GNEKEITVQLSN-TADRPALATAWLDNGNADATPDTITTPFIITPPISRVDAKSGQTLRIKLGSN...AGLAKDKETLWWLNLLEIPPVEAS----QKNEGQN-.......-ILQLAIRS----RFKFIYRPAGLG
DSQ  AATATTATTGTTAACGGTACCCGCTTTATTTATCCA...GGAAATGAAAAAGAAATAACGGTGCAGCTCTCTAAC---ACCGCCGACCGTCCGGCGCTGGCGACAGCCTGGCTGGATAACGGTAATGCCGACGCGACGCCGGATACCATTACGACCCCCTTTATTATCACGCCGCCTATTTCCCGCGTTGATGCGAAAAGCGGTCAAACCCTGCGTATTAAGCTCGGCAGTAAT.........GCAGGGCTGGCTAAAGATAAAGAGACGCTGTGGTGGCTGAACCTTCTGGAAATACCGCCGGTTGAGGCCAGC------------CAGAAAAACGAAGGGCAAAAT---.....................---ATTCTGCAGCTGGCGATTCGTTCG------------CGCTTTAAGTTTATTTATCGCCCTGCCGGGCTAGGC
TRN  10010101100011011
NAM  HIFB1_HAEIN/29-156
ASQ  NVIITGTRVIYP.AGQKNVIVKLENNDDS-AALVQAWIDNGNPNADPKYTKTPFVITPPVARVEAKSGQSLRITFTGG...EPLPDDRESLFYFNLLDIPPKPDA--EFLAKHGSF-.......--MQIAIRS----RLKLFYRPAKLS
DSQ  AATGTGATTATCACTGGCACCAGAGTGATTTATCCC...GCTGGGCAAAAAAATGTTATTGTGAAGTTAGAAAACAATGATGATTCG---GCAGCCTTGGTGCAAGCCTGGATTGATAATGGCAATCCAAATGCCGATCCAAAATACACCAAAACCCCTTTTGTGATTACGCCGCCTGTTGCTCGAGTGGAAGCAAAATCAGGGCAAAGTTTGCGGATTACGTTCACAGGCGGC.........GAGCCTTTACCTGACGATCGTGAAAGCCTCTTTTATTTTAATTTGTTAGATATACCGCCGAAACCCGATGCG------GAATTTCTGGCAAAACACGGCAGTTTT---.....................------ATGCAAATTGCTATTCGTTCA------------CGTTTGAAGTTGTTTTATCGCCCTGCGAAACTTTCG
TRN  10010101100011000
NAM  FIMB_BORPE/28-155
ASQ  SLVITGTRVIYN.AGSPETTVKMSN-EGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLARVDPGKGQTLRIFFNGYpdgKTLPSDRESVFWLNVLEVPPKATP------EEGHG-.......-VLQLTIRS----RLKLFYRPKGLS
DSQ  AGCCTCGTCATCACGGGTACGCGCGTGATCTACAAC...GCGGGCTCGCCCGAGACCACGGTGAAGATGAGCAAC---GAGGGGCAGGCCCCCGCGCTGATGCAGGCATGGATCGATGACGGCAATGCCGAGGCGAAGCCGGACGAAGTCCAGGTGCCGTTCTTCCTGACGCCTCCGCTGGCGCGGGTGGACCCGGGCAAGGGGCAGACCTTGCGCATTTTCTTCAATGGCTACccggatggcAAGACGCTGCCGTCCGACCGCGAATCGGTCTTCTGGCTGAACGTTCTCGAAGTGCCGCCCAAGGCGACGCCC------------------GAGGAAGGCCACGGG---.....................---GTCCTGCAGCTGACCATCCGCTCG------------CGCCTGAAGCTGTTCTATCGGCCCAAGGGCCTGTCC
TRN  11011111101111111
NAM  YEHC_ECOLI/34-157
ASQ  GIVIYGTRIIYP.AENKEVMVQLMN-QGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMP-...NKLPTNKESIFYLNVLDIPPNS------PEQEGKN-.......-ALKFAMQN----RIKLFYRPAGIA
DSQ  GGAATTGTTATCTACGGGACGCGCATTATTTACCCG...GCAGAAAATAAAGAAGTGATGGTGCAGTTGATGAAC---CAGGGAAACCGTTCTTCGCTGCTGCAGGCGTGGATTGATGATGGCGATACGTCATTACCACCAGAAAAAATTCAGGTTCCTTTCATGTTAACGCCACCAGTGGCAAAAATAGGGGCAAATTCCGGGCAGCAAGTAAAAATCAAAATTATGCCG---.........AATAAACTGCCCACTAATAAAGAAAGCATTTTTTATCTGAATGTTCTGGATATTCCACCAAATAGT------------------CCAGAGCAAGAAGGTAAGAAT---.....................---GCACTGAAGTTTGCGATGCAAAAC------------AGAATTAAGTTGTTTTACCGGCCAGCGGGTATTGCT
TRN  10010101100011000
NAM  YRAI_ECOLI/25-145
ASQ  GIVLQRTRVIYD.ASRKEAALPVANKGAETPYLLQSWVDN-----IDGKSRAPFIITPPLFRLEAGDDSSLRIIKTA-...DNLPENKESLFYINVRAIPAKK-----KSDDVNAN-.......-ELTLVFKT----RIKMFYRPAHLK
DSQ  GGAATCGTTTTACAGCGAACGCGAGTGATCTATGAT...GCCAGCCGCAAAGAGGCTGCGTTACCTGTCGCAAACAAAGGCGCAGAAACGCCTTATTTACTGCAATCATGGGTAGATAAT---------------ATAGATGGTAAAAGCCGTGCCCCATTTATTATAACCCCACCGCTATTTCGTCTTGAGGCTGGCGATGACTCATCACTGCGAATTATTAAAACAGCT---.........GATAACCTGCCTGAAAATAAAGAGTCGCTGTTCTACATTAATGTTCGTGCCATTCCAGCAAAGAAA---------------AAATCAGATGATGTTAATGCTAAC---.....................---GAGTTGACGCTGGTATTTAAAACA------------CGGATCAAAATGTTTTATCGCCCCGCACACCTGAAG
TRN  10010101100011000
NAM  LPFB_SALTY/25-144
ASQ  GVALSSTRVIYD.GSRKEASLTVNNKSTTDEFLIQSWIDD-----ANGNKKTPFIITPPLFKLSPTKNNVLRIVNTT-...NTLPQDRESVYWINVKAIPAKSED------AEAKN-.......-VLQIAVRT----RLKLFYRPAGLK
DSQ  GGCGTGGCATTAAGCAGCACGCGTGTTATTTATGAC...GGTAGTAGAAAGGAAGCTTCTCTTACGGTAAATAATAAAAGCACCACGGATGAATTTCTCATTCAGTCATGGATTGATGAT---------------GCTAACGGTAATAAAAAGACGCCCTTTATCATCACTCCACCGTTATTTAAATTAAGCCCGACTAAAAATAACGTTTTACGTATTGTTAATACGACG---.........AACACGTTACCGCAGGATCGCGAGTCCGTTTATTGGATTAACGTAAAAGCTATTCCTGCCAAAAGTGAAGAC------------------GCGGAAGCTAAAAAC---.....................---GTACTGCAGATCGCCGTACGTACC------------CGCTTAAAACTGTTCTATCGCCCGGCGGGCCTGAAA
TRN  10010101100011000
NAM  FIMC_SALTY/26-146
ASQ  GIALGATRVIYP.SAAKQTSLAISNSDTQERYLVNSWIEN-----NAGQKEKTFIVTPPLFVSEPKSENTLRIIYAG-...QPLPGDRESLFWMNVKAIPSVD-----KSHIEGKN-.......-VLQLAILS----RIKLFVRPANLP
DSQ  GGGATTGCATTAGGCGCCACGCGCGTTATTTATCCC...TCGGCGGCGAAGCAGACTTCTCTGGCAATCAGTAATAGCGATACTCAAGAACGTTACCTCGTCAATTCATGGATCGAAAAT---------------AACGCTGGGCAGAAAGAAAAAACGTTTATCGTTACGCCGCCTTTATTCGTCAGCGAGCCCAAAAGTGAAAACACGCTGCGTATTATCTACGCCGGG---.........CAACCGCTACCCGGGGATCGGGAGTCGTTATTCTGGATGAACGTGAAAGCCATCCCGTCGGTCGAT---------------AAAAGTCATATTGAAGGAAAAAAC---.....................---GTTCTGCAACTGGCGATTCTGTCG------------CGCATCAAACTGTTCGTGCGTCCGGCGAATTTGCCG
TRN  11011101101011000
NAM  FIMC_ECOLI/37-157
ASQ  GVALGATRVIYP.AGQKQEQLAVTNNDENSTYLIQSWVEN-----ADGVKDGRFIVTPPLFAMKGKKENTLRILDATN...NQLPQDRESLFWMNVKAIPSMD-----KSKL-TEN-.......-TLQLAIIS----RIKLYYRPAKLA
DSQ  GGAGTGGCCTTAGGTGCGACTCGCGTAATTTATCCG...GCAGGGCAAAAACAAGAGCAACTTGCCGTGACAAATAATGATGAAAATAGTACCTATTTAATTCAATCATGGGTGGAAAAT---------------GCCGATGGTGTAAAGGATGGTCGTTTTATCGTGACGCCTCCTCTGTTTGCGATGAAGGGAAAAAAAGAGAATACCTTACGTATTCTTGATGCAACAAAT.........AACCAATTGCCACAGGACCGGGAAAGTTTATTCTGGATGAACGTTAAAGCGATTCCGTCAATGGAT---------------AAATCAAAATTG---ACTGAGAAT---.....................---ACGCTACAGCTCGCAATTATCAGC------------CGCATTAAACTGTACTATCGCCCGGCTAAATTAGCG
TRN  11011101101011000
NAM  PAPD_ECOLI/22-142
ASQ  AVSLDRTRAVFD.GSEKSMTLDISNDNKQLPYLAQAWIEN---ENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPD..iSKLPQDRESLFYFNLREIPPR--------SEKANV-.......--LQIALQT----KIKLFYRPAAIK
DSQ  GCTGTTTCGCTGGACAGAACCCGCGCGGTGTTTGAC...GGGAGTGAGAAGTCAATGACGCTTGATATCTCCAATGATAACAAACAACTGCCCTATCTTGCTCAGGCATGGATAGAAAAT---------GAAAATCAGGAAAAAATTATTACAGGGCCGGTTATTGCCACCCCTCCGGTTCAGCGCCTTGAGCCGGGTGCGAAAAGCATGGTCAGGCTGAGTACCACACCGGAT......atcAGTAAACTTCCTCAGGACAGGGAATCACTGTTTTATTTTAATCTCAGGGAAATACCGCCGAGG------------------------AGTGAAAAGGCCAATGTA---.....................------CTGCAGATAGCCTTACAGACC------------AAAATAAAGCTTTTTTATCGCCCGGCAGCAATTAAA
TRN  10010101100011000
NAM  FANE_ECOLI/20-137
ASQ  AFTLNSTRYIYN.EGQQSVSVNIHN-ESEHKYGGQVWIDN----IDKNGEVVFFSPSPMVFKLNPKQKQIVRIVNIN-...DNLPKDRESIFWLNVQEIPPAP-------KGDGGS-.......--LSLAINN----RVKLIYRPIALK
DSQ  GCTTTTACTCTCAATAGTACGCGGTATATATATAAT...GAAGGACAGCAAAGTGTATCTGTTAACATCCATAAC---GAAAGTGAACATAAATATGGTGGTCAGGTATGGATTGATAAT------------ATAGACAAGAATGGAGAGGTCGTATTTTTTTCTCCAAGTCCAATGGTGTTCAAATTGAACCCGAAACAGAAGCAAATAGTTCGCATTGTTAATATTAAT---.........GATAATTTACCTAAAGACAGAGAATCGATTTTCTGGCTTAATGTTCAGGAGATCCCTCCAGCTCCA---------------------AAGGGAGATGGGGGTAGT---.....................------CTGTCACTGGCAATTAATAAT------------CGAGTAAAATTAATATATCGACCAATTGCTCTAAAA
TRN  10010101100011000
NAM  CLPE_ECOLI/35-151
ASQ  SLAADQTRYIFR.GDKDALTITVTNNDKERTFGGQAWVDN----IVEKDTRPTFVVTPSFFKVKPNGQQTLRIIMAS-...DHLPKDKESVYWLNLQDIPP---------ALEGSG-.......--IAVAVRT----KLKLFYRPKALI
DSQ  TCCCTAGCGGCAGATCAGACCCGCTATATCTTTCGA...GGGGACAAGGATGCGCTGACCATCACGGTCACCAACAATGACAAGGAGCGTACCTTTGGTGGTCAGGCCTGGGTGGACAAT------------ATCGTGGAGAAGGACACCCGTCCGACTTTTGTGGTGACACCGTCCTTCTTCAAGGTGAAGCCGAATGGTCAGCAGACACTGCGTATCATCATGGCCTCG---.........GACCATCTGCCGAAGGATAAAGAGTCGGTGTACTGGCTGAACCTGCAGGATATTCCGCCG---------------------------GCTCTGGAGGGCAGCGGT---.....................------ATTGCAGTGGCCGTGCGCACG------------AAGCTGAAACTGTTCTATCGCCCGAAGGCACTGATT
TRN  11011101101011011
NAM  SEFB_SALEN/41-166
ASQ  GLRLGTTRVIYK.EDAPSTSFWIMN-EKEYPILVQTQVYN-----DDKSSKAPFIVTPPILKVESNARTRLKVIPTS-...NLFNKNEESLYWLCVKGVPPLND----NESNNKNN-.......ITTNLNVNVVTNSCIKLIYRPKTID
DSQ  GGCCTAAGATTGGGCACTACACGTGTTATTTATAAA...GAAGATGCTCCATCAACAAGTTTTTGGATTATGAAT---GAAAAAGAATATCCAATCCTTGTTCAAACTCAAGTATATAAT---------------GATGATAAATCATCAAAAGCTCCATTTATTGTAACACCACCTATTTTGAAAGTTGAAAGTAATGCGCGAACAAGATTGAAGGTAATACCAACAAGT---.........AATCTATTCAATAAAAATGAGGAGTCTTTGTATTGGTTGTGTGTAAAAGGAGTCCCACCACTAAATGAT------------AATGAAAGCAATAATAAAAACAAC---.....................ATAACTACGAATCTTAATGTGAATGTGGTTACGAATAGTTGTATTAAATTAATTTATAGGCCTAAAACTATAGAC
TRN  10010101110011000
NAM  PSAB_YERPS/44-174
ASQ  TVKIGTTRVIYPsSSTKGVSVSVAN-PQDYPILVQTQVKD-----EDKTSPAPFIVTPPLFRLDAGLQGRVRIIRTG-...GKFPEDRETLQWLCLTGIPPKNGDAWGNTQNNPKN-.......SSPTMDIQMSISTCIKLLFRPDKVK
DSQ  ACTGTAAAAATAGGGACGACGCGGGTCATTTACCCTtcgTCTTCGACAAAAGGGGTATCCGTATCGGTGGCTAAT---CCACAGGATTATCCAATATTGGTACAAACCCAAGTTAAAGAT---------------GAAGATAAGACGTCGCCCGCTCCTTTTATTGTTACCCCTCCTTTATTCAGGCTTGATGCTGGGTTACAAGGCCGTGTACGTATTATTCGGACCGGT---.........GGAAAATTCCCTGAAGATCGTGAAACACTGCAATGGTTGTGCCTAACGGGGATCCCACCTAAGAACGGTGATGCTTGGGGTAATACGCAAAATAATCCAAAAAAT---.....................TCATCCCCAACTATGGATATTCAAATGTCTATCAGTACCTGCATAAAATTATTATTCAGACCCGATAAAGTTAAA
TRN  10010101100011000
NAM  MYFB_YEREN/43-175
ASQ  SVRTGETRIIYPlSSVKGVSLSVTN-PQDYPILVQTQVKG-----EDKHSPAPFMATPPLFRLDAGMRGRVRVTRTG-...GNFPEDRESLQWLCITGVPPKEGDVWDNSQHDKKNN......mQDVNLNILLSVGTCMKLLVRPDQLR
DSQ  TCAGTGAGGACTGGTGAGACACGGATTATCTATCCAttaTCTTCAGTTAAAGGAGTGTCATTATCAGTAACCAAT---CCACAAGATTATCCGATATTGGTACAAACTCAGGTCAAAGGT---------------GAAGATAAACATTCGCCAGCGCCTTTTATGGCGACTCCGCCATTATTTCGCCTGGATGCGGGTATGCGGGGGCGAGTACGCGTAACTCGCACTGGT---.........GGTAACTTCCCCGAGGATCGCGAAAGTTTGCAATGGTTATGTATAACGGGTGTACCACCTAAAGAGGGGGATGTATGGGATAATAGCCAACACGATAAAAAAAACAAT..................atgCAAGATGTTAATCTAAATATCCTGTTATCAGTTGGTACTTGTATGAAGCTACTGGTCAGGCCCGATCAACTTAGA
TRN  10010101100011000
NAM  CAF1M_YERPE/36-171
ASQ  GVTIGESRIIYP.LDAAGVMVSVKN-TQDYPVLIQSRIYD---ENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAG-...GVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFnpdkdvgVFVQFAINN----CIKLLVRPNELK
DSQ  GGCGTGACTATAGGTGAGAGTAGGATCATATACCCG...TTAGATGCTGCTGGCGTTATGGTCTCGGTGAAAAAC---ACCCAAGATTATCCGGTTCTCATTCAGTCTAGGATCTACGAC---------GAGAATAAAGAAAAAGAATCAGAGGATCCTTTCGTGGTCACTCCGCCATTGTTTCGATTGGATGCTAAGCAACAAAATTCTTTGCGTATAGCTCAGGCTGGA---.........GGTGTTTTCCCGCGAGATAAAGAGAGCCTAAAGTGGTTATGCGTAAAAGGGATTCCACCAAAGGATGAAGATATATGGGTTGATGATGCGACAAATAAGCAAAAATTCaatccagacaaagatgtgggaGTGTTCGTGCAATTCGCAATTAATAAT------------TGCATTAAGCTTTTGGTTCGACCGAATGAATTAAAA
TRN  10010101110011000
NAM  NFAE_ECOLI/49-179
ASQ  SLHLGATRVVYN.PASSGETLTVIN-DQDYPMLVQSEVLS-----EDQKSPAPFWWTPPLFRRDGQQSSRRRSVSTG-...GEFPSDRESRQWICVKGIPPKEDDRWAEGKDGEKKA.......DKVSLNVQLSVSSCIKLFVRPPAVK
DSQ  TCGCTGCATCTGGGGGCCACCCGGGTGGTGTACAAC...CCGGCCTCGTCGGGGGAGACGCTGACTGTGATTAAT---GACCAGGACTATCCGATGCTGGTGCAGTCGGAGGTGCTGAGT---------------GAGGACCAGAAGAGTCCGGCGCCTTTTTGGTGGACACCACCGTTGTTCCGTCGTGATGGTCAGCAGTCGAGTCGTCGTCGTAGTGTCAGTACGGGC---.........GGGGAGTTTCCGTCAGACCGTGAGAGTCGGCAGTGGATTTGCGTGAAAGGCATTCCGCCGAAGGAGGATGACAGGTGGGCGGAAGGGAAGGACGGGGAGAAGAAGGCT.....................GACAAAGTCTCCCTGAATGTACAGCTTTCAGTGAGCAGCTGCATCAAGCTGTTTGTTCGTCCGCCGGCGGTGAAG
TRN  10010101100011001
NAM  AGGD_ECOLI/36-166
ASQ  SLHLGATRMIYK.PNSSGETLAVIN-EHNYPILVQANVLS-----EDQKNIAPFIITPPLFRLDALQSSRLRIVKTE-...GAFPIDRESLQWICVKAIPPKYEDKWAKEEVSGKKS.......DKATMNIQVSVSSCIKLFVRPADVK
DSQ  TCTTTGCATTTAGGTGCAACACGTATGATTTATAAG...CCTAATTCTTCTGGAGAAACATTGGCAGTTATTAAT---GAACATAACTATCCTATATTAGTCCAAGCGAATGTATTATCA---------------GAGGATCAAAAAAATATTGCACCTTTTATAATTACACCTCCGTTATTTCGACTTGATGCTCTACAATCAAGCCGCCTTCGTATTGTCAAAACAGAA---.........GGAGCTTTTCCAATAGATCGTGAAAGTCTACAATGGATCTGTGTAAAGGCGATTCCTCCAAAATATGAAGACAAATGGGCTAAAGAAGAAGTTAGCGGAAAAAAATCA.....................GATAAAGCAACTATGAATATACAAGTTTCAGTAAGCAGTTGCATTAAACTATTCGTTCGTCCGGCAGATGTGAAA
TRN  10010101110011000
NAM  CS31_ECOLI/30-155
ASQ  EAILGATRVIYH.LDGNGESLRVKN-PQISPILIQSKVMD-----EGSKDNADFIVTPPLFRLDAKRETDIRIVMVN-...GLYPKDRESLKTLCVRGIPPKQGDLWANNEKEFVG-.......MKLNVSINT----CIKLILRPHNLP
DSQ  GAAGCTATATTGGGTGCAACAAGAGTAATTTACCAC...CTAGATGGTAATGGTGAAAGTCTAAGAGTTAAAAAT---CCGCAGATTAGTCCAATTCTAATTCAATCTAAAGTAATGGAC---------------GAGGGTAGTAAAGATAATGCGGATTTTATTGTTACCCCCCCTCTTTTTAGACTAGATGCAAAAAGAGAAACTGACATTCGTATAGTTATGGTGAAT---.........GGCTTATACCCAAAAGACAGGGAATCTCTAAAGACCCTCTGTGTGCGAGGAATTCCACCAAAACAAGGAGATTTATGGGCTAACAATGAAAAAGAATTTGTTGGA---.....................ATGAAACTTAACGTTTCAATTAACACA------------TGTATTAAATTAATATTAAGACCACATAATCTTCCT
TRN  10010101110011000
NAM  YHCA_ECOLI/21-136
ASQ  GMVPETSVLLVD.EKRGEASINIKN-TDDHPSLLYTTIVD----LPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQA-...-TVPLQSEELKRVTFEGIPPKD--------DKSSR-.......--VTVSIRQ----DLPVLIHPASLP
DSQ  GGGATGGTTCCTGAAACATCAGTATTGCTGGTTGAT...GAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAAT---ACAGATGATCATCCTTCATTGCTTTACACCACCATTGTTGAT------------TTGCCTGAAAGCAATAAATCAATTCGTTTAATCCCGACTCAGCCCGTTATTCGTGTTGAAGCCGGTCAAGTACAACAGGTTCGATTTTTACTTCAGGCG---.........---ACTGTTCCTCTGCAATCAGAAGAGCTGAAACGCGTAACGTTCGAAGGTATTCCACCAAAAGAT------------------------GACAAGAGCAGCAGA---.....................------GTTACTGTTTCAATTCGTCAG------------GATCTACCTGTACTGATCCACCCGGCTTCCCTGCCG
TRN  10010101100011000
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