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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF00097 - zf-C3HC4)
FAM  PF00097
PID  zf-C3HC4
DES  Zinc finger, C3HC4 type (RING finger)
IPR  IPR001841
ANO  65
ALN  74
AID  0.312497
APH  ((((PEX2_CRIGR/243-282:1.08369,((ICP0_EHV1B/8-46:0.21018,(ICP0_BHV1J/13-51:0.30581,(ICP0_VZVD/19-57:0.56842,(ICP0_PRVIF/46-84:0.20557,ICP0_HHV11/116-156:0.72276):0.19831):0.24904):0.25994):0.11121,(((YKZ7_YEAST/179-223:1.53720,((ZEF2_IRV6/85-132:0.92982,CBL_HUMAN/381-419:0.45873):0.45044,((RAD5_YEAST/914-960:0.23173,RAD8_SCHPO/877-922:1.16968):0.52549,YEU6_YEAST/206-249:0.77432):0.00000):0.27478):0.12241,((Q21530_CAEEL/16-66:0.81719,((Q9VB61_DROME/23-78:0.32731,Q9W3I6_DROME/34-88:0.31136):0.16358,Q9CPS3_MOUSE/14-68:0.12347):0.11748):0.28740,(((VIE1_BHV4D/132-176:0.57653,Q997C2_9POXV/23-68:0.53464):0.19869,(((O40920_HHV8/9-53:0.63073,Q20977_CAEEL/52-95:0.53243):0.08502,O41933_MHV68/8-51:0.59003):0.15042,(((Q9P2E8_HUMAN/205-250:0.71962,Q9V972_DROME/167-212:0.27762):0.02497,(((((Q93227_CAEEL/13-67:0.27353,Q18997_CAEEL/25-71:0.55382):0.18311,MARH2_MOUSE/64-109:0.34474):0.23454,(Q9NIN1_9APIC/232-291:0.49811,Q9DBD2_MOUSE/76-122:0.21963):0.19392):0.06452,Q9H992_HUMAN/552-607:0.32930):0.07102,(Q9XWI0_CAEEL/194-247:0.44536,((O49494_ARATH/68-114:0.35936,SSM4_YEAST/39-93:0.53114):0.12662,O60103_SCHPO/8-54:0.14608):0.32533):0.04087):0.22011):0.08202,((Q9FWY0_ARATH/20-65:0.36055,(O64633_ARATH/74-119:0.58184,((Q9FYM9_ARATH/249-296:0.27661,Q9SQT6_ARATH/218-264:0.33160):0.28243,Q9FIL2_ARATH/81-129:0.33600):0.17647):0.28471):0.33145,Q9W3Y8_DROME/91-137:0.81173):0.10464):0.08826):0.04254):0.13281,((Q20802_CAEEL/160-209:1.27529,Q39623_CHLRE/12-58:0.54641):0.19017,Q9VQI2_DROME/392-442:0.37855):0.32762):0.17392):0.72378):0.01429,((GOLI_DROME/303-343:0.84323,(((TRI27_HUMAN/16-56:0.63792,(A33_PLEWA/162-201:0.34001,(((RNG1_HUMAN/19-58:0.65472,((BRCA1_HUMAN/24-64:0.43816,((((SUZ2_DROME/35-73:0.60019,PSC_DROME/265-303:0.28796):0.16656,BMI1_HUMAN/18-56:0.27316):0.67097,YNN1_CAEEL/8-45:0.06797):0.43321,RAD18_YEAST/28-65:0.36700):0.18654):0.00000,TRAF2_MOUSE/34-72:0.92395):0.18839):0.11879,TRI30_MOUSE/15-58:0.31593):0.09541,RO52_HUMAN/16-54:0.42246):0.28384):0.00000):0.17856,(RAG1_CHICK/289-327:0.89809,ESAG8_TRYBB/10-45:0.42494):0.51419):0.17812,(PML_HUMAN/57-91:0.94110,NHL1_CAEEL/43-83:0.01081):0.54980):0.14312):0.13130,(RFP1_CAEEL/782-820:0.73945,RAD16_YEAST/537-580:0.65076):0.32721):0.00000):0.37987):0.31803):0.39610,VCG3_NPVAC/8-62:1.04979):0.32580,PE38_NPVOP/39-91:0.17767):0.17734,PE38_NPVAC/86-138:0.21650,VIE2_NPVOP/207-254:1.19210);
ATP  ((((PEX2_CRIGR/243-282,((ICP0_EHV1B/8-46,(ICP0_BHV1J/13-51,(ICP0_VZVD/19-57,(ICP0_PRVIF/46-84,ICP0_HHV11/116-156)))),(((YKZ7_YEAST/179-223,((ZEF2_IRV6/85-132,CBL_HUMAN/381-419),((RAD5_YEAST/914-960,RAD8_SCHPO/877-922),YEU6_YEAST/206-249))),((Q21530_CAEEL/16-66,((Q9VB61_DROME/23-78,Q9W3I6_DROME/34-88),Q9CPS3_MOUSE/14-68)),(((VIE1_BHV4D/132-176,Q997C2_9POXV/23-68),(((O40920_HHV8/9-53,Q20977_CAEEL/52-95),O41933_MHV68/8-51),(((Q9P2E8_HUMAN/205-250,Q9V972_DROME/167-212),(((((Q93227_CAEEL/13-67,Q18997_CAEEL/25-71),MARH2_MOUSE/64-109),(Q9NIN1_9APIC/232-291,Q9DBD2_MOUSE/76-122)),Q9H992_HUMAN/552-607),(Q9XWI0_CAEEL/194-247,((O49494_ARATH/68-114,SSM4_YEAST/39-93),O60103_SCHPO/8-54)))),((Q9FWY0_ARATH/20-65,(O64633_ARATH/74-119,((Q9FYM9_ARATH/249-296,Q9SQT6_ARATH/218-264),Q9FIL2_ARATH/81-129))),Q9W3Y8_DROME/91-137)))),((Q20802_CAEEL/160-209,Q39623_CHLRE/12-58),Q9VQI2_DROME/392-442)))),((GOLI_DROME/303-343,(((TRI27_HUMAN/16-56,(A33_PLEWA/162-201,(((RNG1_HUMAN/19-58,((BRCA1_HUMAN/24-64,((((SUZ2_DROME/35-73,PSC_DROME/265-303),BMI1_HUMAN/18-56),YNN1_CAEEL/8-45),RAD18_YEAST/28-65)),TRAF2_MOUSE/34-72)),TRI30_MOUSE/15-58),RO52_HUMAN/16-54))),(RAG1_CHICK/289-327,ESAG8_TRYBB/10-45)),(PML_HUMAN/57-91,NHL1_CAEEL/43-83))),(RFP1_CAEEL/782-820,RAD16_YEAST/537-580))))),VCG3_NPVAC/8-62),PE38_NPVOP/39-91),PE38_NPVAC/86-138,VIE2_NPVOP/207-254);
ATL  48.8047
DNO  63
DLN  222
DID  0.410407
DPH  (((((((((((((((((((((Q9FYM9_ARATH/249-296:0.24675,(O64633_ARATH/74-119:0.50428,Q9FIL2_ARATH/81-129:0.27502):0.14977):0.07522,Q9SQT6_ARATH/218-264:0.16716):0.21966,O40920_HHV8/9-53:0.40893):0.09553,(((Q9FWY0_ARATH/20-65:0.30533,(Q18997_CAEEL/25-71:0.35989,(Q21530_CAEEL/16-66:0.50051,Q20802_CAEEL/160-209:0.48504):0.18829):0.12080):0.05359,(((O49494_ARATH/68-114:0.38885,O60103_SCHPO/8-54:0.16222):0.10591,(Q9XWI0_CAEEL/194-247:0.37711,Q93227_CAEEL/13-67:0.35826):0.12605):0.11521,SSM4_YEAST/39-93:0.41541):0.12396):0.11951,((Q997C2_9POXV/23-68:0.46550,VIE1_BHV4D/132-176:0.31217):0.19866,Q20977_CAEEL/52-95:0.27187):0.11271):0.03446):0.05940,Q9H992_HUMAN/552-607:0.44640):0.14291,(O41933_MHV68/8-51:0.48291,Q9V972_DROME/167-212:0.27040):0.12563):0.06668,MARH2_MOUSE/64-109:0.32581):0.08228,(Q9NIN1_9APIC/232-291:0.44534,Q9DBD2_MOUSE/76-122:0.19521):0.11254):0.13312,Q9P2E8_HUMAN/205-250:0.32426):0.05507,(Q9CPS3_MOUSE/14-68:0.27704,(Q9W3I6_DROME/34-88:0.32955,Q9VB61_DROME/23-78:0.17948):0.07298):0.28715):0.13963,((Q9VQI2_DROME/392-442:0.27995,Q39623_CHLRE/12-58:0.33124):0.09633,Q9W3Y8_DROME/91-137:0.37110):0.07650):0.17198,CBL_HUMAN/381-419:0.68168):0.04976,(PML_HUMAN/57-91:0.30696,NHL1_CAEEL/43-83:0.45538):0.18976):0.09119,(VCG3_NPVAC/8-62:0.96189,GOLI_DROME/303-343:0.15866):0.29574):0.07038,(((ICP0_HHV11/116-156:0.33350,ICP0_VZVD/19-57:0.42521):0.12997,ICP0_PRVIF/46-84:0.09596):0.13995,ICP0_BHV1J/13-51:0.15251):0.14745):0.22463,RNG1_HUMAN/19-58:0.28571):0.13208,(((TRAF2_MOUSE/34-72:0.55690,(BRCA1_HUMAN/24-64:0.16995,(RAG1_CHICK/289-327:0.52165,RAD18_YEAST/28-65:0.31257):0.16121):0.18240):0.07357,(PEX2_CRIGR/243-282:0.46154,(((((BMI1_HUMAN/18-56:0.19250,(PSC_DROME/265-303:0.23652,SUZ2_DROME/35-73:0.40572):0.24753):0.13289,YNN1_CAEEL/8-45:0.33311):0.14905,(A33_PLEWA/162-201:0.29396,TRI27_HUMAN/16-56:0.39599):0.15752):0.07442,RAD16_YEAST/537-580:0.43577):0.08208,RFP1_CAEEL/782-820:0.60718):0.07440):0.11872):0.09632,TRI30_MOUSE/15-58:0.21058):0.11410):0.10274,RO52_HUMAN/16-54:0.12813):0.28986,((RAD5_YEAST/914-960:0.25664,(RAD8_SCHPO/877-922:0.42688,(YKZ7_YEAST/179-223:0.50052,ZEF2_IRV6/85-132:0.42388):0.19218):0.20167):0.25848,YEU6_YEAST/206-249:0.38432):0.14738):0.21788,VIE2_NPVOP/207-254:0.51191):0.21427,PE38_NPVAC/86-138:0.32096,PE38_NPVOP/39-91:0.16749);
DTP  (((((((((((((((((((((Q9FYM9_ARATH/249-296,(O64633_ARATH/74-119,Q9FIL2_ARATH/81-129)),Q9SQT6_ARATH/218-264),O40920_HHV8/9-53),(((Q9FWY0_ARATH/20-65,(Q18997_CAEEL/25-71,(Q21530_CAEEL/16-66,Q20802_CAEEL/160-209))),(((O49494_ARATH/68-114,O60103_SCHPO/8-54),(Q9XWI0_CAEEL/194-247,Q93227_CAEEL/13-67)),SSM4_YEAST/39-93)),((Q997C2_9POXV/23-68,VIE1_BHV4D/132-176),Q20977_CAEEL/52-95))),Q9H992_HUMAN/552-607),(O41933_MHV68/8-51,Q9V972_DROME/167-212)),MARH2_MOUSE/64-109),(Q9NIN1_9APIC/232-291,Q9DBD2_MOUSE/76-122)),Q9P2E8_HUMAN/205-250),(Q9CPS3_MOUSE/14-68,(Q9W3I6_DROME/34-88,Q9VB61_DROME/23-78))),((Q9VQI2_DROME/392-442,Q39623_CHLRE/12-58),Q9W3Y8_DROME/91-137)),CBL_HUMAN/381-419),(PML_HUMAN/57-91,NHL1_CAEEL/43-83)),(VCG3_NPVAC/8-62,GOLI_DROME/303-343)),(((ICP0_HHV11/116-156,ICP0_VZVD/19-57),ICP0_PRVIF/46-84),ICP0_BHV1J/13-51)),RNG1_HUMAN/19-58),(((TRAF2_MOUSE/34-72,(BRCA1_HUMAN/24-64,(RAG1_CHICK/289-327,RAD18_YEAST/28-65))),(PEX2_CRIGR/243-282,(((((BMI1_HUMAN/18-56,(PSC_DROME/265-303,SUZ2_DROME/35-73)),YNN1_CAEEL/8-45),(A33_PLEWA/162-201,TRI27_HUMAN/16-56)),RAD16_YEAST/537-580),RFP1_CAEEL/782-820))),TRI30_MOUSE/15-58)),RO52_HUMAN/16-54),((RAD5_YEAST/914-960,(RAD8_SCHPO/877-922,(YKZ7_YEAST/179-223,ZEF2_IRV6/85-132))),YEU6_YEAST/206-249)),VIE2_NPVOP/207-254),PE38_NPVAC/86-138,PE38_NPVOP/39-91);
DTL  30.5249
RID  0.311172
RPH  (((((((((((((((Q9FWY0_ARATH/20-65:0.32895,(O64633_ARATH/74-119:0.60294,((Q9FYM9_ARATH/249-296:0.29010,Q9SQT6_ARATH/218-264:0.32425):0.29526,Q9FIL2_ARATH/81-129:0.30603):0.16772):0.31482):0.27256,Q9W3Y8_DROME/91-137:0.90393):0.08705,(((Q18997_CAEEL/25-71:0.49380,Q93227_CAEEL/13-67:0.33507):0.16161,(MARH2_MOUSE/64-109:0.17181,Q9P2E8_HUMAN/205-250:0.79848):0.18702):0.18647,((((Q9NIN1_9APIC/232-291:0.58953,Q9DBD2_MOUSE/76-122:0.12559):0.27004,((O49494_ARATH/68-114:0.35474,SSM4_YEAST/39-93:0.53289):0.13037,O60103_SCHPO/8-54:0.14583):0.28862):0.07159,(Q9V972_DROME/167-212:0.38489,Q9XWI0_CAEEL/194-247:0.38413):0.08353):0.08974,Q9H992_HUMAN/552-607:0.31142):0.10634):0.11627):0.10980,(O40920_HHV8/9-53:0.59892,(((Q997C2_9POXV/23-68:0.63196,VIE1_BHV4D/132-176:0.55886):0.24470,O41933_MHV68/8-51:0.58927):0.10715,Q20977_CAEEL/52-95:0.56540):0.06553):0.03877):0.14141,Q20802_CAEEL/160-209:1.31883):0.00000,((Q9VQI2_DROME/392-442:0.36198,Q39623_CHLRE/12-58:0.69071):0.15490,(Q21530_CAEEL/16-66:0.69004,((Q9VB61_DROME/23-78:0.34667,Q9W3I6_DROME/34-88:0.30213):0.16452,Q9CPS3_MOUSE/14-68:0.12167):0.24773):0.43356):0.26215):0.58013,(ZEF2_IRV6/85-132:0.93565,CBL_HUMAN/381-419:0.42930):0.39376):0.15475,(((YKZ7_YEAST/179-223:1.15279,RAD8_SCHPO/877-922:0.81920):0.21294,RAD5_YEAST/914-960:0.55904):0.35620,(((((RO52_HUMAN/16-54:0.46106,TRI30_MOUSE/15-58:0.34427):0.07424,(A33_PLEWA/162-201:0.27886,TRI27_HUMAN/16-56:0.69492):0.25728):0.10679,((((SUZ2_DROME/35-73:0.60188,PSC_DROME/265-303:0.28799):0.17765,BMI1_HUMAN/18-56:0.26277):0.69179,YNN1_CAEEL/8-45:0.07598):0.36433,(RAD18_YEAST/28-65:0.35953,(BRCA1_HUMAN/24-64:0.46283,(TRAF2_MOUSE/34-72:0.76941,RNG1_HUMAN/19-58:0.56603):0.21354):0.09741):0.16305):0.26038):0.20319,(RAG1_CHICK/289-327:1.15327,RAD16_YEAST/537-580:0.19639):0.48901):0.13593,(RFP1_CAEEL/782-820:0.77365,YEU6_YEAST/206-249:0.81897):0.24915):0.05764):0.20731):0.17691,PEX2_CRIGR/243-282:1.35071):0.08221,(PML_HUMAN/57-91:0.85880,NHL1_CAEEL/43-83:0.09713):0.24831):0.40580,GOLI_DROME/303-343:0.73609):0.25084,(((ICP0_HHV11/116-156:0.64494,ICP0_PRVIF/46-84:0.30317):0.12841,ICP0_BHV1J/13-51:0.47321):0.16636,ICP0_VZVD/19-57:0.52726):0.25467):0.28922,VCG3_NPVAC/8-62:1.01738):0.33084,VIE2_NPVOP/207-254:1.06421):0.15178,PE38_NPVAC/86-138:0.27241,PE38_NPVOP/39-91:0.30605);
RTP  (((((((((((((((Q9FWY0_ARATH/20-65,(O64633_ARATH/74-119,((Q9FYM9_ARATH/249-296,Q9SQT6_ARATH/218-264),Q9FIL2_ARATH/81-129))),Q9W3Y8_DROME/91-137),(((Q18997_CAEEL/25-71,Q93227_CAEEL/13-67),(MARH2_MOUSE/64-109,Q9P2E8_HUMAN/205-250)),((((Q9NIN1_9APIC/232-291,Q9DBD2_MOUSE/76-122),((O49494_ARATH/68-114,SSM4_YEAST/39-93),O60103_SCHPO/8-54)),(Q9V972_DROME/167-212,Q9XWI0_CAEEL/194-247)),Q9H992_HUMAN/552-607))),(O40920_HHV8/9-53,(((Q997C2_9POXV/23-68,VIE1_BHV4D/132-176),O41933_MHV68/8-51),Q20977_CAEEL/52-95))),Q20802_CAEEL/160-209),((Q9VQI2_DROME/392-442,Q39623_CHLRE/12-58),(Q21530_CAEEL/16-66,((Q9VB61_DROME/23-78,Q9W3I6_DROME/34-88),Q9CPS3_MOUSE/14-68)))),(ZEF2_IRV6/85-132,CBL_HUMAN/381-419)),(((YKZ7_YEAST/179-223,RAD8_SCHPO/877-922),RAD5_YEAST/914-960),(((((RO52_HUMAN/16-54,TRI30_MOUSE/15-58),(A33_PLEWA/162-201,TRI27_HUMAN/16-56)),((((SUZ2_DROME/35-73,PSC_DROME/265-303),BMI1_HUMAN/18-56),YNN1_CAEEL/8-45),(RAD18_YEAST/28-65,(BRCA1_HUMAN/24-64,(TRAF2_MOUSE/34-72,RNG1_HUMAN/19-58))))),(RAG1_CHICK/289-327,RAD16_YEAST/537-580)),(RFP1_CAEEL/782-820,YEU6_YEAST/206-249)))),PEX2_CRIGR/243-282),(PML_HUMAN/57-91,NHL1_CAEEL/43-83)),GOLI_DROME/303-343),(((ICP0_HHV11/116-156,ICP0_PRVIF/46-84),ICP0_BHV1J/13-51),ICP0_VZVD/19-57)),VCG3_NPVAC/8-62),VIE2_NPVOP/207-254),PE38_NPVAC/86-138,PE38_NPVOP/39-91);
RTL  47.4165
LNK  A33_PLEWA/162-201:Q02084:L04190
LNK  BMI1_HUMAN/18-56:P35226:L13689
LNK  BRCA1_HUMAN/24-64:P38398:U14680
LNK  CBL_HUMAN/381-419:P22681:X57110
LNK  ESAG8_TRYBB/10-45:P23799:
LNK  GOLI_DROME/303-343:Q06003:AE003466
LNK  ICP0_BHV1J/13-51:P29128:M84465
LNK  ICP0_EHV1B/8-46:P28990:
LNK  ICP0_HHV11/116-156:P08393:X14112
LNK  ICP0_PRVIF/46-84:P29129:M57504
LNK  ICP0_VZVD/19-57:P09309:X04370
LNK  MARH2_MOUSE/64-109:Q99M02:AK079234
LNK  NHL1_CAEEL/43-83:Q03601:Z19155
LNK  O40920_HHV8/9-53:O40920:U93872
LNK  O41933_MHV68/8-51:O41933:U97553
LNK  O49494_ARATH/68-114:O49494:AL021961
LNK  O60103_SCHPO/8-54:O60103:AL023780
LNK  O64633_ARATH/74-119:O64633:AC003680
LNK  PE38_NPVAC/86-138:P23801:M62488
LNK  PE38_NPVOP/39-91:P32512:M83827
LNK  PEX2_CRIGR/243-282:Q06438:Z17220
LNK  PML_HUMAN/57-91:P29590:X63131
LNK  PSC_DROME/265-303:P35820:X59275
LNK  Q18997_CAEEL/25-71:Q18997:Z36948
LNK  Q20802_CAEEL/160-209:Q20802:Z72511
LNK  Q20977_CAEEL/52-95:Q20977:Z70754
LNK  Q21530_CAEEL/16-66:Q21530:Z49968
LNK  Q39623_CHLRE/12-58:Q39623:X59683
LNK  Q93227_CAEEL/13-67:Q93227:Z81037
LNK  Q997C2_9POXV/23-68:Q997C2:AF229033
LNK  Q9CPS3_MOUSE/14-68:Q9CPS3:AK009232
LNK  Q9DBD2_MOUSE/76-122:Q9DBD2:AK005032
LNK  Q9FIL2_ARATH/81-129:Q9FIL2:AB016885
LNK  Q9FWY0_ARATH/20-65:Q9FWY0:AC022521
LNK  Q9FYM9_ARATH/249-296:Q9FYM9:AB005240
LNK  Q9H992_HUMAN/552-607:Q9H992:AK022973
LNK  Q9NIN1_9APIC/232-291:Q9NIN1:AF206252
LNK  Q9P2E8_HUMAN/205-250:Q9P2E8:AB037820
LNK  Q9SQT6_ARATH/218-264:Q9SQT6:AC011623
LNK  Q9V972_DROME/167-212:Q9V972:AE003791
LNK  Q9VB61_DROME/23-78:Q9VB61:AE003760
LNK  Q9VQI2_DROME/392-442:Q9VQI2:BT006012
LNK  Q9W3I6_DROME/34-88:Q9W3I6:AE003443
LNK  Q9W3Y8_DROME/91-137:Q9W3Y8:AE003438
LNK  Q9XWI0_CAEEL/194-247:Q9XWI0:AL032647
LNK  RAD16_YEAST/537-580:P31244:M86929
LNK  RAD18_YEAST/28-65:P10862:M36405
LNK  RAD5_YEAST/914-960:P32849:M96644
LNK  RAD8_SCHPO/877-922:P36607:X74615
LNK  RAG1_CHICK/289-327:P24271:M58530
LNK  RFP1_CAEEL/782-820:P34537:L07144
LNK  RNG1_HUMAN/19-58:Q06587:Z14000
LNK  RO52_HUMAN/16-54:P19474:U01882
LNK  SSM4_YEAST/39-93:P40318:X76715
LNK  SUZ2_DROME/35-73:P25172:X56798
LNK  TRAF2_MOUSE/34-72:P39429:L35303
LNK  TRI27_HUMAN/16-56:P14373:J03407
LNK  TRI30_MOUSE/15-58:P15533:AF220014
LNK  VCG3_NPVAC/8-62:P16091:M26529
LNK  VIE1_BHV4D/132-176:P27426:M60043
LNK  VIE2_NPVOP/207-254:P32511:M83827
LNK  YEU6_YEAST/206-249:P40072:U18916
LNK  YKZ7_YEAST/179-223:P36113:Z28242
LNK  YNN1_CAEEL/8-45:Q03605:Z19156
LNK  ZEF2_IRV6/85-132:P40629:L22300
AMK  xxxxxxxxxxxxxx...........xxxxxxxxxxxxxxxxxxxxxxxxxxx........xxxxx.....xxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.................................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx........................xxxxxxxxxxxxxxx...............xxxxxxxxxxxx
NAM  Q20802_CAEEL/160-209
ASQ  CVLCLNQKYQNPEWse......qndAKLIRPCFCGTL---VHHGCITERLK-........LEKT-.....CQWC
DSQ  TGTGTATTGTGCCTCAATCAAAAATATCAAAATCCAGAATGGtctgaa..................cagaatgatGCCAAATTAATTCGCCCTTGTTTTTGCGGAACATTA---------GTTCATCACGGATGTATCACTGAACGTCTGAAA---........................TTGGAAAAGACG---...............TGTCAATGGTGT
TRN  11011101101011010
NAM  RAD8_SCHPO/877-922
ASQ  CPICCNEPIQNP--...........--LLLNCKHA-----CCGDCLSEHIQYqk....rrNIIPP....lCHTC
DSQ  TGTCCCATATGTTGTAATGAACCAATTCAAAATCCC------.................................------TTGTTATTGAACTGCAAGCATGCT---------------TGTTGCGGAGATTGTTTGTCAGAACATATTCAGTATcaaaaa............agaagaAACATAATTCCTCCG............cttTGTCATACATGT
TRN  10010101110011000
NAM  Q39623_CHLRE/12-58
ASQ  CWICLAG-AESG--...........-PLERPCRCP---RSVHLSCLGRWQLQqa....grSEEQR.....CRFC
DSQ  TGCTGGATTTGCCTTGCGGGC---GCCGAGTCTGGG------.................................---CCTCTTGAACGGCCGTGCCGCTGCCCC---------CGCTCCGTCCACCTGTCCTGTCTTGGCCGGTGGCAGCTGCAGcaggct............ggtcgcTCGGAGGAGCAGCGC...............TGCCGCTTCTGC
TRN  11011111101111111
NAM  CBL_HUMAN/381-419
ASQ  CKICAENDKDVK--...........---IEPCGHL-----MCTSCLTSWQE-........SEGQG.....CPFC
DSQ  TGTAAAATATGTGCTGAAAATGATAAGGATGTAAAG------.................................---------ATTGAGCCCTGTGGACACCTC---------------ATGTGCACATCCTGTCTTACATCCTGGCAGGAA---........................TCAGAAGGTCAGGGC...............TGTCCTTTCTGC
TRN  10010101110011001
NAM  Q9VB61_DROME/23-78
ASQ  CWICFETDKEAGRQ...........-AWVNPCLCRGTNKWVHQSCISLWIDEk......tRINNNlqavsCPQC
DSQ  TGCTGGATCTGTTTTGAGACCGATAAGGAGGCAGGTCGCCAG.................................---GCTTGGGTGAATCCATGTCTCTGCCGAGGAACCAATAAGTGGGTGCACCAGAGCTGCATTTCCCTCTGGATCGACGAGaag..................accCGAATAAACAACAATctgcaagccgtttccTGTCCACAATGC
TRN  10010111100111011
NAM  Q9W3I6_DROME/34-88
ASQ  CWICLRGDEDHRRR...........-DWVHPCRCRGTNKWVHEACLSRWIDE.......kEMLSPgapvtCTQC
DSQ  TGCTGGATTTGCCTGAGGGGCGATGAGGATCACCGCCGAAGG.................................---GATTGGGTGCATCCGTGTCGCTGTCGCGGCACCAATAAATGGGTGCACGAGGCCTGTCTGAGTCGCTGGATCGATGAG.....................aagGAGATGCTATCGCCGggtgctcccgtgacgTGCACCCAATGC
TRN  10010101100011011
NAM  Q9CPS3_MOUSE/14-68
ASQ  CWVCFATDEDDRTA...........-EWVRPCRCRGSTKWVHQACLQRWVDE.......kQRGNStarvaCPQC
DSQ  TGCTGGGTGTGCTTTGCCACCGATGAAGATGATAGAACAGCT.................................---GAGTGGGTGAGACCATGCAGGTGCAGAGGATCTACTAAGTGGGTTCACCAGGCTTGTCTCCAGCGCTGGGTAGATGAA.....................aagCAAAGAGGAAACAGCacagccagagtggccTGTCCTCAGTGC
TRN  10010101110011011
NAM  Q21530_CAEEL/16-66
ASQ  CKFCFGTESDNALS...........--FVHPCRCRGSIHWVHHQCLAMWFSK.......aNAVQQ...vmCIQC
DSQ  TGTAAATTCTGCTTCGGAACGGAAAGTGATAATGCGTTAAGC.................................------TTCGTTCATCCGTGTCGATGTCGAGGATCTATTCACTGGGTTCATCATCAATGCCTGGCCATGTGGTTTTCGAAA.....................gcgAATGCTGTACAACAA.........gttatgTGTATTCAGTGC
TRN  11011101101011010
NAM  SSM4_YEAST/39-93
ASQ  CRICRGEATEDN--...........-PLFHPCKCRGSIKYMHESCLLEWVASknidiskpGADVK.....CDIC
DSQ  TGCCGTATTTGTCGTGGAGAAGCTACTGAGGACAAT------.................................---CCTCTTTTCCATCCTTGTAAATGCAGGGGCTCAATTAAATACATGCATGAATCCTGTCTGTTGGAATGGGTAGCTTCAaaaaatatagacatttcaaaaccaGGCGCGGATGTTAAA...............TGTGACATCTGT
TRN  10010101100011001
NAM  Q93227_CAEEL/13-67
ASQ  CRICMCGETSIPYLgq......qagEPLISPCKCSGTMGLFHRSCLEHWLTL........TSTTN.....CEIC
DSQ  TGTCGGATATGTATGTGTGGCGAGACTTCAATTCCCTACCTGggccaa..................caagctggaGAGCCTCTCATTTCTCCTTGTAAGTGCTCCGGAACAATGGGTCTCTTTCATCGAAGCTGTTTGGAGCACTGGCTTACACTC........................ACAAGCACTACTAAC...............TGTGAAATCTGC
TRN  10010111100111001
NAM  Q18997_CAEEL/25-71
ASQ  CRICFDNDTSS---...........DSLIKPCSCSGTVAYVHNGCLEQWVRT........TSNIQ.....CTIC
DSQ  TGCAGAATATGTTTCGATAACGATACGAGTTCC---------.................................GACAGTCTGATCAAGCCATGCTCTTGTAGCGGAACAGTCGCCTACGTTCACAATGGATGCTTGGAGCAATGGGTCCGTACA........................ACATCAAACATTCAA...............TGTACCATATGT
TRN  10010101100011001
NAM  Q9P2E8_HUMAN/205-250
ASQ  CRICFQGPEQGE--...........--LLSPCRCDGSVKCTHQPCLIKWISE........RGCWS.....CELC
DSQ  TGCCGCATCTGCTTCCAGGGGCCAGAACAGGGGGAG------.................................------CTGCTGAGCCCATGCCGCTGTGATGGCTCGGTCAAGTGCACACACCAGCCTTGCCTCATCAAGTGGATCAGCGAG........................CGGGGCTGCTGGAGC...............TGCGAGCTGTGC
TRN  11011111101111111
NAM  Q9XWI0_CAEEL/194-247
ASQ  CRICHCCWPPDSND...........-PLISPCRCSGSLQYVHVSCLMHWLDIss...rklHRPAI.....CELC
DSQ  TGTAGGATTTGTCATTGCTGTTGGCCTCCAGACTCAAATGAT.................................---CCGCTGATTTCTCCTTGTAGATGTTCTGGATCTTTGCAATATGTACATGTGTCGTGTTTAATGCACTGGCTCGACATTtcgtcg.........agaaagctgCATCGGCCTGCAATA...............TGCGAACTATGC
TRN  10010101100011000
NAM  MARH2_MOUSE/64-109
ASQ  CRICHEGANG----...........ENLLSPCGCTGTLGAVHKSCLEKWLSS........SNTSY.....CELC
DSQ  TGCCGAATCTGCCACGAGGGAGCAAATGGG------------.................................GAGAACTTGCTGTCCCCATGTGGCTGCACGGGCACACTGGGAGCTGTGCACAAGAGCTGCCTGGAGAAATGGCTGTCTTCC........................TCCAACACCAGCTAC...............TGTGAGCTGTGT
TRN  11011101101011011
NAM  Q9V972_DROME/167-212
ASQ  CRICHNADNPEQ--...........--LVSPCLCKGSLTYVHVHCLECWIST........SRCTT.....CELC
DSQ  TGTCGCATTTGTCACAATGCCGATAATCCCGAACAA------.................................------CTCGTGTCGCCGTGTTTGTGCAAGGGCTCGCTGACATATGTCCATGTTCACTGCCTGGAGTGTTGGATTAGCACC........................TCGCGCTGCACCACC...............TGCGAGCTGTGC
TRN  11011111101111111
NAM  Q9H992_HUMAN/552-607
ASQ  CRICQMAAASSSN-...........-LLIEPCKCTGSLQYVHQDCMKKWLQAkinsgsslEAVTT.....CELC
DSQ  TGTAGAATTTGTCAAATGGCAGCTGCATCATCATCTAAT---.................................---TTGCTGATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAAGTGGTTACAGGCCaaaattaactctggttcttcattaGAAGCTGTAACCACC...............TGTGAACTATGT
TRN  10010101100011000
NAM  O60103_SCHPO/8-54
ASQ  CRVCRCEGAPDS--...........-PLFHPCKCTGSIRYVHQECLVEWLGH........SKKTH.....CELC
DSQ  TGCCGGGTGTGCCGGTGTGAGGGAGCACCAGATTCA------.................................---CCTCTCTTCCATCCATGTAAATGTACTGGAAGTATCAGATATGTTCATCAGGAATGTCTAGTAGAGTGGTTAGGTCAC........................AGTAAAAAAACACAT...............TGTGAACTTTGC
TRN  10010101110011000
NAM  Q9DBD2_MOUSE/76-122
ASQ  CRICHCEGDDES--...........-PLITPCHCTGSLHFVHQACLQQWIKS........SDTRC.....CELC
DSQ  TGCAGGATCTGCCACTGTGAAGGGGATGACGAGAGC------.................................---CCTCTGATCACCCCCTGTCACTGCACAGGGAGCCTCCATTTCGTGCATCAGGCTTGCCTGCAGCAGTGGATCAAGAGT........................TCTGACACACGCTGC...............TGTGAACTCTGC
TRN  10010101100011011
NAM  O49494_ARATH/68-114
ASQ  CRICRNPGDADN--...........-PLRYPCACSGSIKFVHQDCLLQWLNH........SNARQ.....CEVC
DSQ  TGCAGGATCTGCAGAAATCCTGGTGATGCAGACAAT------.................................---CCGCTTCGGTATCCGTGTGCCTGTAGCGGAAGTATCAAATTTGTTCACCAGGATTGTCTCCTTCAGTGGCTTAATCAC........................AGCAACGCTCGTCAA...............TGCGAGGTTTGC
TRN  10010101110011011
NAM  Q9W3Y8_DROME/91-137
ASQ  CRICRWNRNDME--...........-IIKCPCNCKGSVGYIHLKCLKRWIMH........RRDNR.....CEIC
DSQ  TGCCGCATCTGCCGCTGGAACCGCAACGACATGGAG------.................................---ATCATCAAATGTCCCTGCAACTGCAAGGGCAGCGTGGGCTACATCCACCTAAAGTGCTTGAAGCGCTGGATCATGCAC........................AGGCGGGATAATCGC...............TGTGAGATCTGC
TRN  10010101110011011
NAM  Q9NIN1_9APIC/232-291
ASQ  CRICLCGESDPG--...........-PLVTPCNCKGSLNYVHLECLRTWIKGrlsivkddDASFFwkelsCELC
DSQ  TGCCGTATTTGCCTGTGTGGTGAATCAGACCCTGGG------.................................---CCACTAGTAACCCCTTGCAATTGCAAGGGGTCCCTAAATTATGTCCATCTTGAATGCCTAAGGACTTGGATTAAAGGGcggttgtcaattgtgaaggatgatGATGCTTCCTTTTTCtggaaagagctatcaTGTGAGCTATGC
TRN  10010101100011001
NAM  VIE1_BHV4D/132-176
ASQ  CWICRDGESLPE--...........---ARYCNCYGDLQYCHEECLKTWISM........SGEKK.....CKFC
DSQ  TGTTGGATATGTAGAGATGGTGAGAGTTTACCTGAA------.................................---------GCAAGGTACTGCAATTGTTATGGGGACTTACAATATTGTCATGAAGAATGTTTAAAGACATGGATTAGCATG........................TCTGGAGAGAAAAAG...............TGTAAGTTCTGC
TRN  10010101110011010
NAM  Q20977_CAEEL/52-95
ASQ  CRICQMHEG-----...........-DMVRPCDCAGTMGDVHEECLTKWVNM........SNKKT.....CEIC
DSQ  TGTAGAATCTGTCAAATGCACGAGGGA---------------.................................---GATATGGTTAGACCATGTGATTGTGCTGGAACGATGGGTGATGTGCATGAGGAATGTCTCACGAAATGGGTAAACATG........................TCAAACAAGAAAACC...............TGTGAAATTTGT
TRN  10010101110011001
NAM  O41933_MHV68/8-51
ASQ  CWICHQPEGPLK--...........----RFCGCKGSCAVSHQDCLRGWLET........SRRQT.....CALC
DSQ  TGTTGGATCTGCCACCAGCCAGAGGGTCCCCTTAAA------.................................------------AGATTCTGTGGCTGCAAGGGGTCCTGTGCCGTGTCTCATCAAGACTGTCTACGTGGTTGGCTGGAGACG........................TCGCGTCGCCAGACG...............TGTGCGCTGTGT
TRN  10010101100011011
NAM  O40920_HHV8/9-53
ASQ  CWICNEELGNER--...........---FRACGCTGELENVHRSCLSTWLTI........SRNTA.....CQIC
DSQ  TGCTGGATTTGCAACGAGGAGCTCGGAAATGAGAGA------.................................---------TTTAGAGCCTGTGGATGCACAGGAGAGCTCGAGAACGTCCATAGAAGTTGTTTAAGCACCTGGCTCACTATC........................TCTAGAAACACGGCC...............TGTCAGATATGT
TRN  10010101110011010
NAM  Q9VQI2_DROME/392-442
ASQ  CWICYDS-DKPE--...........-PLIQPCRCTGDVSSVHHECLKRWLVEsc...snsEAQLS.....CKVC
DSQ  TGCTGGATCTGTTACGACTCC---GACAAGCCAGAG------.................................---CCCCTCATCCAGCCCTGCCGCTGCACTGGCGACGTAAGTTCGGTGCACCACGAGTGTCTCAAGCGCTGGCTGGTGGAGagctgc.........agcaattcgGAGGCGCAGTTGTCG...............TGCAAGGTCTGC
TRN  11011111101111111
NAM  Q997C2_9POXV/23-68
ASQ  CWICKEACDIVP--...........----NYCKCRGDNKIVHKECLEEWINTd......vVKNKS.....CAIC
DSQ  TGTTGGATATGCAAAGAAGCCTGTGACATCGTACCC------.................................------------AATTACTGCAAATGCCGAGGGGATAATAAGATCGTGCATAAGGAATGTTTGGAAGAGTGGATCAACACAgat..................gtcGTGAAAAACAAATCG...............TGTGCCATATGC
TRN  10010101110011011
NAM  Q9FIL2_ARATH/81-129
ASQ  CRICHLPLETNNGL...........-PLQLGCSCKGDLGVAHSKCAETWFKI........KGNMT.....CEIC
DSQ  TGCAGGATCTGTCATCTTCCTTTAGAGACTAACAATGGTTTG.................................---CCTTTGCAATTAGGTTGCTCTTGTAAAGGTGATTTGGGTGTTGCTCATAGTAAGTGTGCTGAGACTTGGTTTAAGATC........................AAAGGAAACATGACA...............TGTGAGATATGC
TRN  10010101110011010
NAM  Q9SQT6_ARATH/218-264
ASQ  CRICLDVCEEGN--...........-TLKMECSCKGDLRLVHEACAMKWFST........KGTRT.....CDVC
DSQ  TGCAGGATCTGTCTGGACGTGTGCGAAGAAGGAAAT------.................................---ACTTTGAAAATGGAATGCAGCTGCAAAGGTGATCTCAGACTTGTTCATGAAGCTTGTGCAATGAAATGGTTTAGTACA........................AAGGGAACAAGAACC...............TGTGACGTCTGT
TRN  10010101100011011
NAM  Q9FYM9_ARATH/249-296
ASQ  CRICMVEMEEDEE-...........-AFKMECMCKGELALAHKTCTIKWFTI........KGNIT.....CDVC
DSQ  TGTAGAATCTGTATGGTTGAAATGGAAGAAGATGAAGAA---.................................---GCTTTTAAGATGGAATGTATGTGCAAAGGGGAACTAGCTCTTGCCCACAAAACGTGCACTATCAAATGGTTTACAATT........................AAAGGGAACATAACA...............TGTGATGTGTGT
TRN  10010101110011011
NAM  O64633_ARATH/74-119
ASQ  CRVCLQDKEEVL--...........--IELGCQCRGGLAKAHRSCIDAWFRT........KGSNQ.....CEIC
DSQ  TGCAGGGTTTGTCTACAAGACAAAGAAGAGGTTTTG------.................................------ATTGAACTAGGTTGTCAATGTCGTGGTGGTCTTGCTAAAGCTCACAGGTCTTGTATAGATGCTTGGTTTCGTACT........................AAAGGCTCTAACCAG...............TGTGAGATCTGT
TRN  10010101110011011
NAM  Q9FWY0_ARATH/20-65
ASQ  CRICHEEEAESY--...........--FEAPCSCSGTIKFAHRDCIQRWCDE........KGNTI.....CEIC
DSQ  TGTAGAATCTGTCACGAAGAAGAAGCTGAGAGCTAC------.................................------TTTGAAGCTCCTTGTTCTTGTTCAGGAACCATCAAGTTCGCTCACAGAGATTGCATACAACGATGGTGTGATGAG........................AAAGGAAACACAATT...............TGTGAAATTTGT
TRN  10010101110011001
NAM  VIE2_NPVOP/207-254
ASQ  CHICSCTFTDIQNYn........snFVTSTECNHA-----VCFKCYVSIVFG........KESYK.....CSIC
DSQ  TGCCACATCTGCTCTTGCACGTTTACCGACATCCAAAACTACaat........................tcaaacTTCGTAACCTCCACTGAGTGCAACCACGCG---------------GTTTGTTTCAAATGTTACGTCAGCATCGTGTTTGGC........................AAGGAATCGTACAAG...............TGTAGCATCTGC
TRN  11111101111011001
NAM  VCG3_NPVAC/8-62
ASQ  CNICFSVAEIKNYFlqpidrltiipVLELDTCKHQ-----LCSMCIRKIRK-........RKKVP.....CPLC
DSQ  TGCAACATTTGTTTTTCGGTTGCAGAAATTAAAAATTATTTTctgcaaccaatagacagattgactataatacccGTATTAGAACTAGACACGTGCAAACATCAA---------------TTATGCTCAATGTGTATACGCAAGATTAGAAAA---........................CGAAAAAAAGTACCA...............TGTCCCTTGTGT
TRN  10010101100011000
NAM  YEU6_YEAST/206-249
ASQ  CPICFEPPETAL--...........---MTLCGHV-----FCCPCLFQMVNSs.....rtCRQFG....hCALC
DSQ  TGCCCGATTTGTTTTGAACCTCCAGAGACAGCCCTC------.................................---------ATGACGTTATGTGGGCACGTC---------------TTTTGTTGTCCATGCTTATTTCAAATGGTTAATAGCtca...............agaacaTGTAGACAGTTCGGC............catTGCGCTCTTTGT
TRN  10010101110011000
NAM  RAD5_YEAST/914-960
ASQ  CSICTTEPMDLDK-...........-ALFTECGHS-----FCEKCLFEYIEFq......nSKNLG...lkCPNC
DSQ  TGCTCCATCTGCACAACGGAACCTATGGATTTGGACAAG---.................................---GCTTTATTTACAGAATGCGGCCACAGT---------------TTTTGTGAGAAATGTTTATTTGAATATATTGAGTTTcag..................aacAGTAAGAATTTGGGT.........ttaaagTGCCCCAATTGC
TRN  11111101111011010
NAM  RAD16_YEAST/537-580
ASQ  CQLCNDEAEEPI--...........---ESKCHHK-----FCRLCIKEYVESf......mENNNK...ltCPVC
DSQ  TGCCAATTATGTAACGATGAAGCTGAGGAGCCCATT------.................................---------GAATCTAAATGTCACCATAAG---------------TTCTGTCGTTTATGCATCAAAGAATATGTGGAATCTttc..................atgGAAAACAACAATAAA.........cttactTGTCCTGTTTGT
TRN  11011101111011010
NAM  RFP1_CAEEL/782-820
ASQ  CPSCKTRPKDCI--...........---MLKCYHL-----FCETCIKTMYD-........TRQRK.....CPKC
DSQ  TGTCCATCATGTAAAACGAGGCCAAAGGATTGTATT------.................................---------ATGCTCAAATGCTATCATTTA---------------TTCTGTGAAACTTGCATTAAGACTATGTACGAC---........................ACTCGTCAACGGAAA...............TGCCCGAAATGC
TRN  10010101110011000
NAM  ICP0_VZVD/19-57
ASQ  CTICMSTVSDLG--...........--KTMPCLHD-----FCFVCIRAWTS-........-TSVQ.....CPLC
DSQ  TGCACCATATGCATGAGCACCGTTTCCGATCTCGGA------.................................------AAAACCATGCCGTGTTTGCACGAC---------------TTCTGCTTTGTTTGTATTCGGGCATGGACCTCC---........................---ACCAGCGTCCAG...............TGTCCTCTCTGC
TRN  10010101110011011
NAM  ICP0_PRVIF/46-84
ASQ  CPICLDVAATEA--...........--QTLPCMHK-----FCLDCIQRWTL-........-TSTA.....CPLC
DSQ  TGCCCCATCTGCCTGGACGTCGCGGCCACCGAGGCG------.................................------CAGACGCTGCCGTGCATGCACAAG---------------TTCTGTCTGGACTGCATCCAGCGCTGGACCCTG---........................---ACGAGCACCGCC...............TGCCCGCTGTGC
TRN  11011111101111111
NAM  ICP0_EHV1B/8-46
ASQ  CPICLEDPSNYS--...........--MALPCLHA-----FCYVCITRWIR-........-QNPT.....CPLC
NAM  ICP0_BHV1J/13-51
ASQ  CCICLDAITGAA--...........--RALPCLHA-----FCLACIRRWLE-........-GRPT.....CPLC
DSQ  TGCTGCATCTGCCTGGACGCGATCACCGGCGCGGCG------.................................------CGCGCTCTGCCCTGCCTGCACGCC---------------TTCTGCCTGGCCTGCATCCGCCGGTGGCTGGAG---........................---GGGCGCCCGACC...............TGCCCGCTGTGC
TRN  11011111101111111
NAM  RNG1_HUMAN/19-58
ASQ  CPICLDMLKNTMT-...........---TKECLHR-----FCSDCIVTALR-........SGNKE.....CPTC
DSQ  TGCCCTATCTGCCTGGACATGCTGAAGAATACGATGACC---.................................---------ACCAAGGAGTGCCTCCACAGA---------------TTCTGCTCTGACTGCATTGTCACAGCCCTACGG---........................AGCGGGAACAAGGAG...............TGTCCTACCTGC
TRN  10010101100011011
NAM  GOLI_DROME/303-343
ASQ  CAICIEAYKPTDT-...........-IRILPCKHE-----FHKNCIDPWLI-........-EHRT.....CPMC
DSQ  TGTGCTATATGCATCGAAGCCTATAAGCCCACGGACACC---.................................---ATACGGATATTGCCGTGCAAGCACGAG---------------TTCCATAAAAACTGCATAGATCCGTGGCTTATA---........................---GAGCATCGAACC...............TGTCCCATGTGT
TRN  10010101110011011
NAM  ICP0_HHV11/116-156
ASQ  CAVCTDEIAPHLR-...........-CDTFPCMHR-----FCIPCMKTWMQL........RN-T-.....CPLC
DSQ  TGCGCCGTGTGCACGGATGAGATCGCGCCCCACCTGCGC---.................................---TGCGACACCTTCCCGTGCATGCACCGC---------------TTCTGCATCCCGTGCATGAAAACCTGGATGCAATTG........................CGCAAC---ACC---...............TGCCCGCTGTGC
TRN  11011101101011011
NAM  NHL1_CAEEL/43-83
ASQ  CPICLDRYKQPK--...........---LLPCQHT-----FCYPCLESCADT.......lHRNLK.....CPEC
DSQ  TGTCCGATTTGTCTCGATCGCTACAAACAACCCAAG------.................................---------CTTCTACCTTGTCAACACACA---------------TTTTGCTATCCATGCTTGGAAAGTTGTGCAGACACG.....................ttaCATCGCAATTTGAAA...............TGTCCAGAATGT
TRN  11011101111011010
NAM  PML_HUMAN/57-91
ASQ  CQQCQAEAKCPK--...........---LLPCLHT-----LCSGCLEASG--........---MQ.....CPIC
DSQ  TGCCAGCAATGCCAGGCGGAAGCCAAGTGCCCGAAG------.................................---------CTGCTGCCTTGTCTGCACACG---------------CTGTGCTCAGGATGCCTGGAGGCGTCGGGC------........................---------ATGCAG...............TGCCCCATCTGC
TRN  11011111101111101
NAM  ESAG8_TRYBB/10-45
ASQ  CAVCREPWAEGAVE...........---LLPCRHV-----FCTACVVQRWR-........-----.....CPSC
NAM  TRI27_HUMAN/16-56
ASQ  CPVCLQYFAEPM--...........---MLDCGHN-----ICCACLARCWGT.......aETNVS.....CPQC
DSQ  TGCCCCGTGTGCCTGCAGTACTTCGCAGAGCCCATG------.................................---------ATGCTCGACTGCGGCCATAAC---------------ATCTGTTGCGCGTGCCTCGCCCGCTGCTGGGGCACG.....................gcaGAGACTAACGTGTCG...............TGCCCGCAGTGC
TRN  11011111101111111
NAM  A33_PLEWA/162-201
ASQ  CPLCRSLFKEPV--...........---ILECGHN-----FCKHCIDKSWES.......aSA-FS.....CPEC
DSQ  TGCCCACTATGCAGGTCACTCTTCAAGGAACCCGTC------.................................---------ATTCTGGAATGTGGCCATAAC---------------TTCTGCAAGCACTGCATTGATAAATCTTGGGAGAGC.....................gccTCTGCC---TTTTCC...............TGCCCAGAATGC
TRN  10010101100011001
NAM  YNN1_CAEEL/8-45
ASQ  CAVCLDFFVEPC--...........---IIECGHS-----YCRFCIESHLN-........INEK-.....CPLC
DSQ  TGTGCGGTTTGCTTGGATTTTTTTGTGGAGCCTTGC------.................................---------ATAATAGAATGTGGTCATTCT---------------TATTGTCGATTTTGTATCGAAAGTCACCTGAAT---........................ATCAATGAAAAG---...............TGCCCACTGTGC
TRN  10010111100111011
NAM  TRI30_MOUSE/15-58
ASQ  CPICLELLKEPV--...........---SADCNHS-----FCRACITLNYESnr....ntDGKGN.....CPVC
DSQ  TGTCCTATCTGTTTGGAGCTCCTGAAGGAACCTGTG------.................................---------AGTGCTGATTGTAACCACAGC---------------TTCTGCAGAGCCTGCATCACACTGAATTATGAGTCCaacaga............aacacaGACGGGAAGGGCAAC...............TGCCCTGTATGC
TRN  10010101100011011
NAM  RO52_HUMAN/16-54
ASQ  CPICLDPFVEPV--...........---SIECGHS-----FCQECISQVGK-........GGGSV.....CPVC
DSQ  TGCCCTATCTGCCTGGACCCCTTCGTGGAGCCTGTG------.................................---------AGCATCGAGTGTGGCCACAGC---------------TTCTGCCAGGAATGCATCTCTCAGGTTGGGAAA---........................GGTGGGGGCAGCGTC...............TGTCCTGTGTGC
TRN  11011101101011011
NAM  RAD18_YEAST/28-65
ASQ  CHICKDFLKVPV--...........---LTPCGHT-----FCSLCIRTHLN-........NQPN-.....CPLC
DSQ  TGTCACATTTGTAAAGATTTTCTAAAAGTCCCCGTC------.................................---------TTAACACCTTGTGGCCATACA---------------TTTTGTTCCCTTTGTATTAGAACACATTTGAAT---........................AACCAACCAAAT---...............TGTCCTCTCTGC
TRN  10010101110011010
NAM  BRCA1_HUMAN/24-64
ASQ  CPICLELIKEPV--...........---STKCDHI-----FCKFCMLKLLNQ.......kKGPSQ.....CPLC
DSQ  TGTCCCATCTGTCTGGAGTTGATCAAGGAACCTGTC------.................................---------TCCACAAAGTGTGACCACATA---------------TTTTGCAAATTTTGCATGCTGAAACTTCTCAACCAG.....................aagAAAGGGCCTTCACAG...............TGTCCTTTATGT
TRN  10010101100011000
NAM  RAG1_CHICK/289-327
ASQ  CQICEHILADPV--...........---ETTCRHL-----FCRTCILSCIR-........VMGCY.....CPSC
DSQ  TGCCAGATCTGTGAGCATATTTTGGCAGACCCAGTG------.................................---------GAAACAACGTGTAGACACTTG---------------TTTTGCAGAACTTGCATTCTCAGTTGCATCAGA---........................GTTATGGGATGCTAT...............TGCCCTTCCTGC
TRN  10010101110011011
NAM  SUZ2_DROME/35-73
ASQ  CRLCRGYMIDPT--...........--TVDYCYHT-----YCRSCILKHLL-........-RAVY.....CPEC
DSQ  TGCCGACTTTGTCGCGGTTACATGATCGATCCAACC------.................................------ACTGTGGATTACTGTTATCATACC---------------TATTGCCGGAGTTGCATACTAAAGCACCTGCTG---........................---CGAGCGGTATAT...............TGTCCGGAATGT
TRN  10010111100111011
NAM  PSC_DROME/265-303
ASQ  CHLCQGYLINAT--...........--TIVECLHS-----FCHSCLINHLR-........-KERF.....CPRC
DSQ  TGTCACCTGTGCCAGGGATATCTGATCAATGCCACC------.................................------ACCATCGTCGAGTGTCTGCACTCC---------------TTCTGCCACAGTTGCCTCATTAATCACCTGCGA---........................---AAGGAGCGATTC...............TGCCCGCGCTGC
TRN  11011111101111111
NAM  BMI1_HUMAN/18-56
ASQ  CVLCGGYFIDAT--...........--TIIECLHS-----FCKTCIVRYLE-........-TSKY.....CPIC
DSQ  TGTGTGCTTTGTGGAGGGTACTTCATTGATGCCACA------.................................------ACCATAATAGAATGTCTACATTCC---------------TTCTGTAAAACTTGTATTGTTCGTTACCTGGAG---........................---ACCAGCAAGTAT...............TGTCCTATTTGT
TRN  10010101100011011
NAM  ZEF2_IRV6/85-132
ASQ  CIICLTNQVQIL--...........---TIPCGHL----IMCNPCSLNLNNSvc....trGVNSN..yekCPKC
DSQ  TGTATTATTTGTTTAACAAATCAAGTTCAAATATTA------.................................---------ACAATACCTTGTGGACATCTT------------ATAATGTGCAACCCTTGTTCACTTAATTTAAATAATTCGgtttgc............accagaGGGGTAAACTCAAAC......tacgaaaaaTGCCCTAAATGC
TRN  10010101110011000
NAM  PE38_NPVOP/39-91
ASQ  CAVCLETYCVQSNNi........idFLMPSECTHL-----FCYKCVLNMYKNam...nvpRAAVS.....CPMC
DSQ  TGCGCCGTGTGTTTGGAAACGTACTGCGTGCAATCCAACAACatt........................atcgacTTTTTGATGCCCAGCGAGTGCACCCATTTG---------------TTTTGCTACAAGTGTGTTTTGAACATGTACAAAAACgccatg.........aacgttccgCGCGCCGCCGTCAGC...............TGCCCCATGTGC
TRN  11111101111011011
NAM  PE38_NPVAC/86-138
ASQ  CSVCLETYSQQSNDt........cpFLIPTTCDHG-----FCFKCVINLQSNam...nipHSTVC.....CPLC
DSQ  TGTAGTGTGTGTTTAGAAACATATTCCCAACAATCTAACGATact........................tgtcctTTTTTGATTCCGACTACGTGCGACCACGGT---------------TTTTGTTTCAAATGCGTCATCAATCTGCAAAGCAACgcgatg.........aatattccgCATTCCACTGTGTGC...............TGTCCATTGTGC
TRN  11011101101011010
NAM  PEX2_CRIGR/243-282
ASQ  CALCGEWPTMPH--...........---TIGCEHV-----FCYYCVKSSFLF........DMYFT.....CPKC
DSQ  TGTGCTCTCTGTGGAGAGTGGCCCACAATGCCTCAC------.................................---------ACCATTGGATGTGAACACGTC---------------TTCTGTTATTACTGTGTTAAAAGTAGCTTCCTATTT........................GACATGTACTTTACC...............TGTCCTAAGTGT
TRN  11011101111011011
NAM  TRAF2_MOUSE/34-72
ASQ  CSACKNILRRPF--...........---QAQCGHR-----YCSFCLTSILS-........SGPQN.....CAAC
DSQ  TGTTCAGCCTGCAAAAACATCCTGCGGAGGCCTTTC------.................................---------CAGGCCCAGTGTGGGCACCGC---------------TACTGCTCCTTCTGCCTGACCAGCATCCTCAGC---........................TCTGGGCCCCAGAAC...............TGTGCTGCCTGT
TRN  10010101100011001
NAM  YKZ7_YEAST/179-223
ASQ  CIICCDKKDTET--...........--FALECGHE-----YCINCYRHYIKDkl....heGNIIT.....CMDC
DSQ  TGTATTATTTGTTGTGATAAAAAGGATACGGAAACA------.................................------TTTGCGTTGGAATGTGGCCATGAA---------------TATTGTATCAATTGCTACCGTCATTACATCAAGGATaagttg............catgagGGGAACATCATTACA...............TGCATGGACTGT
TRN  11111101111011011
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