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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF00020 - TNFR_c6)
FAM  PF00020
PID  TNFR_c6
DES  TNFR/NGFR cysteine-rich region
IPR  IPR001368
ANO  37
ALN  50
AID  0.33693
APH  ((((((TNR3_HUMAN/83-124:0.88074,((TNR16_RAT/33-65:0.54086,TNR6_MOUSE/44-78:0.79335):0.29574,TNR4_RAT/26-59:0.48329):0.13016):0.12869,((((TNR9_MOUSE/47-85:1.13555,TNR7_HUMAN/65-104:0.24588):0.79520,((TNR8_HUMAN/69-106:1.19213,(TNR6_HUMAN/129-165:0.27460,TNR6_MOUSE/125-161:0.38411):0.25389):0.12228,TNR4_RAT/62-102:0.78885):0.09650):0.19887,(TNR16_RAT/68-108:0.86912,(TNR16_RAT/150-189:0.35590,TNR16_CHICK/141-180:0.02895):0.25173):0.14078):0.34027,(((TNR1B_HUMAN/78-118:0.09917,TNR1B_MOUSE/79-119:0.32813):0.27311,(VT2_SFVKA/64-104:0.45073,CRMB_VARV/68-108:0.20296):0.14288):0.51555,(TNR1A_HUMAN/84-125:0.11386,TNR1A_RAT/84-125:0.26380):0.02403):0.23986):0.14080):0.24766,(((((TNR8_HUMAN/29-65:0.69692,TNR7_HUMAN/27-62:0.97641):0.42564,((TNR1B_HUMAN/40-75:0.28917,TNR1B_MOUSE/40-76:0.06146):0.25498,(VT2_SFVKA/28-61:0.51944,CRMB_VARV/32-65:0.30896):0.67372):0.27160):0.00113,TNR3_HUMAN/43-80:0.29850):0.17867,(VA53_VACCC/37-72:0.55139,(TNR6_HUMAN/85-127:0.11247,TNR6_MOUSE/81-123:0.14590):0.47292):0.31399):0.40673,(TNR1A_HUMAN/44-81:0.23122,TNR1A_MOUSE/44-81:0.00000):0.43647):0.16866):0.21411,(TNR5_HUMAN/26-59:0.16075,TNR5_MOUSE/26-59:0.45871):0.28505):0.17058,(TNR1A_HUMAN/127-166:0.14514,TNR1A_RAT/127-166:0.36371):0.26285):0.73040,TNR16_RAT/110-147:0.06269,TNR16_CHICK/101-138:0.38728);
ATP  ((((((TNR3_HUMAN/83-124,((TNR16_RAT/33-65,TNR6_MOUSE/44-78),TNR4_RAT/26-59)),((((TNR9_MOUSE/47-85,TNR7_HUMAN/65-104),((TNR8_HUMAN/69-106,(TNR6_HUMAN/129-165,TNR6_MOUSE/125-161)),TNR4_RAT/62-102)),(TNR16_RAT/68-108,(TNR16_RAT/150-189,TNR16_CHICK/141-180))),(((TNR1B_HUMAN/78-118,TNR1B_MOUSE/79-119),(VT2_SFVKA/64-104,CRMB_VARV/68-108)),(TNR1A_HUMAN/84-125,TNR1A_RAT/84-125)))),(((((TNR8_HUMAN/29-65,TNR7_HUMAN/27-62),((TNR1B_HUMAN/40-75,TNR1B_MOUSE/40-76),(VT2_SFVKA/28-61,CRMB_VARV/32-65))),TNR3_HUMAN/43-80),(VA53_VACCC/37-72,(TNR6_HUMAN/85-127,TNR6_MOUSE/81-123))),(TNR1A_HUMAN/44-81,TNR1A_MOUSE/44-81))),(TNR5_HUMAN/26-59,TNR5_MOUSE/26-59)),(TNR1A_HUMAN/127-166,TNR1A_RAT/127-166)),TNR16_RAT/110-147,TNR16_CHICK/101-138);
ATL  25.2483
DNO  35
DLN  150
DID  0.437916
DPH  ((((TNR6_HUMAN/85-127:0.08623,TNR6_MOUSE/81-123:0.10051):0.27383,(TNR1A_HUMAN/44-81:0.13467,TNR1A_MOUSE/44-81:0.05133):0.43259):0.05621,((TNR6_MOUSE/44-78:0.59856,(((TNR6_HUMAN/129-165:0.18424,TNR6_MOUSE/125-161:0.18085):0.23506,(TNR9_MOUSE/47-85:0.64133,TNR7_HUMAN/65-104:0.34701):0.18105):0.17170,TNR4_RAT/62-102:0.28101):0.16503):0.09566,(TNR16_RAT/33-65:0.37020,((TNR16_RAT/110-147:0.27247,(TNR1A_HUMAN/127-166:0.21306,TNR1A_RAT/127-166:0.11322):0.21017):0.21499,(((((VT2_SFVKA/64-104:0.26720,CRMB_VARV/68-108:0.29447):0.37079,(TNR1B_MOUSE/79-119:0.19538,TNR1B_HUMAN/78-118:0.16701):0.11226):0.24608,(TNR1A_HUMAN/84-125:0.09191,TNR1A_RAT/84-125:0.19275):0.19529):0.00000,TNR8_HUMAN/69-106:0.68719):0.06572,TNR3_HUMAN/83-124:0.37751):0.09085):0.13818):0.15709):0.11232):0.16428,(TNR4_RAT/26-59:0.35368,((TNR16_RAT/68-108:0.44869,TNR16_RAT/150-189:0.36276):0.34822,(TNR8_HUMAN/29-65:0.54286,((TNR5_HUMAN/26-59:0.16490,TNR5_MOUSE/26-59:0.26846):0.19219,TNR7_HUMAN/27-62:0.51879):0.00000):0.09525):0.08690):0.11136,((VA53_VACCC/37-72:0.53066,(TNR1B_HUMAN/40-75:0.19056,TNR1B_MOUSE/40-76:0.06813):0.17665):0.03653,((VT2_SFVKA/28-61:0.35880,CRMB_VARV/32-65:0.24233):0.36368,TNR3_HUMAN/43-80:0.24957):0.25300):0.20778);
DTP  ((((TNR6_HUMAN/85-127,TNR6_MOUSE/81-123),(TNR1A_HUMAN/44-81,TNR1A_MOUSE/44-81)),((TNR6_MOUSE/44-78,(((TNR6_HUMAN/129-165,TNR6_MOUSE/125-161),(TNR9_MOUSE/47-85,TNR7_HUMAN/65-104)),TNR4_RAT/62-102)),(TNR16_RAT/33-65,((TNR16_RAT/110-147,(TNR1A_HUMAN/127-166,TNR1A_RAT/127-166)),(((((VT2_SFVKA/64-104,CRMB_VARV/68-108),(TNR1B_MOUSE/79-119,TNR1B_HUMAN/78-118)),(TNR1A_HUMAN/84-125,TNR1A_RAT/84-125)),TNR8_HUMAN/69-106),TNR3_HUMAN/83-124))))),(TNR4_RAT/26-59,((TNR16_RAT/68-108,TNR16_RAT/150-189),(TNR8_HUMAN/29-65,((TNR5_HUMAN/26-59,TNR5_MOUSE/26-59),TNR7_HUMAN/27-62)))),((VA53_VACCC/37-72,(TNR1B_HUMAN/40-75,TNR1B_MOUSE/40-76)),((VT2_SFVKA/28-61,CRMB_VARV/32-65),TNR3_HUMAN/43-80)));
DTL  15.4105
RID  0.338306
RPH  (((((((TNR1B_HUMAN/78-118:0.10926,TNR1B_MOUSE/79-119:0.32050):0.28396,(VT2_SFVKA/64-104:0.45713,CRMB_VARV/68-108:0.19612):0.13764):0.45799,(TNR1A_HUMAN/84-125:0.09842,TNR1A_RAT/84-125:0.27984):0.08659):0.32374,((((TNR9_MOUSE/47-85:1.06372,TNR7_HUMAN/65-104:0.29513):0.68687,TNR3_HUMAN/83-124:0.69848):0.19065,((TNR16_RAT/33-65:0.58944,TNR6_MOUSE/44-78:0.76863):0.36120,TNR4_RAT/26-59:0.47819):0.16692):0.09988,(((TNR8_HUMAN/69-106:1.21375,(TNR6_HUMAN/129-165:0.37913,TNR6_MOUSE/125-161:0.28880):0.19954):0.32883,TNR4_RAT/62-102:0.59370):0.25867,(TNR16_RAT/68-108:0.83533,TNR16_RAT/150-189:0.52386):0.25023):0.30775):0.00000):0.30497,((TNR16_RAT/110-147:0.70506,(TNR1A_HUMAN/127-166:0.15054,TNR1A_RAT/127-166:0.36963):0.30193):0.22221,(TNR5_HUMAN/26-59:0.14350,TNR5_MOUSE/26-59:0.48384):0.24845):0.15896):0.17418,(((((TNR1B_HUMAN/40-75:0.29307,TNR1B_MOUSE/40-76:0.05841):0.23344,(VT2_SFVKA/28-61:0.51931,CRMB_VARV/32-65:0.31263):0.69616):0.27376,(TNR8_HUMAN/29-65:0.68560,TNR7_HUMAN/27-62:0.99493):0.41941):0.00000,TNR3_HUMAN/43-80:0.32531):0.20062,(VA53_VACCC/37-72:0.57763,(TNR6_HUMAN/85-127:0.11076,TNR6_MOUSE/81-123:0.14685):0.44960):0.26601):0.37817):0.46699,TNR1A_HUMAN/44-81:0.23161,TNR1A_MOUSE/44-81:0.00000);
RTP  (((((((TNR1B_HUMAN/78-118,TNR1B_MOUSE/79-119),(VT2_SFVKA/64-104,CRMB_VARV/68-108)),(TNR1A_HUMAN/84-125,TNR1A_RAT/84-125)),((((TNR9_MOUSE/47-85,TNR7_HUMAN/65-104),TNR3_HUMAN/83-124),((TNR16_RAT/33-65,TNR6_MOUSE/44-78),TNR4_RAT/26-59)),(((TNR8_HUMAN/69-106,(TNR6_HUMAN/129-165,TNR6_MOUSE/125-161)),TNR4_RAT/62-102),(TNR16_RAT/68-108,TNR16_RAT/150-189)))),((TNR16_RAT/110-147,(TNR1A_HUMAN/127-166,TNR1A_RAT/127-166)),(TNR5_HUMAN/26-59,TNR5_MOUSE/26-59))),(((((TNR1B_HUMAN/40-75,TNR1B_MOUSE/40-76),(VT2_SFVKA/28-61,CRMB_VARV/32-65)),(TNR8_HUMAN/29-65,TNR7_HUMAN/27-62)),TNR3_HUMAN/43-80),(VA53_VACCC/37-72,(TNR6_HUMAN/85-127,TNR6_MOUSE/81-123)))),TNR1A_HUMAN/44-81,TNR1A_MOUSE/44-81);
RTL  24.4151
LNK  CRMB_VARV/32-65:P34015:X69198
LNK  CRMB_VARV/68-108:P34015:X69198
LNK  TNR16_CHICK/101-138:P18519:
LNK  TNR16_CHICK/141-180:P18519:
LNK  TNR16_RAT/110-147:P07174:X05137
LNK  TNR16_RAT/150-189:P07174:X05137
LNK  TNR16_RAT/33-65:P07174:X05137
LNK  TNR16_RAT/68-108:P07174:X05137
LNK  TNR1A_HUMAN/127-166:P19438:X55313
LNK  TNR1A_HUMAN/44-81:P19438:X55313
LNK  TNR1A_HUMAN/84-125:P19438:X55313
LNK  TNR1A_MOUSE/44-81:P25118:M60468
LNK  TNR1A_RAT/127-166:P22934:M63122
LNK  TNR1A_RAT/84-125:P22934:M63122
LNK  TNR1B_HUMAN/40-75:P20333:M32315
LNK  TNR1B_HUMAN/78-118:P20333:M32315
LNK  TNR1B_MOUSE/40-76:P25119:M60469
LNK  TNR1B_MOUSE/79-119:P25119:M60469
LNK  TNR3_HUMAN/43-80:P36941:L04270
LNK  TNR3_HUMAN/83-124:P36941:L04270
LNK  TNR4_RAT/26-59:P15725:X17037
LNK  TNR4_RAT/62-102:P15725:X17037
LNK  TNR5_HUMAN/26-59:P25942:X60592
LNK  TNR5_MOUSE/26-59:P27512:M83312
LNK  TNR6_HUMAN/129-165:P25445:M67454
LNK  TNR6_HUMAN/85-127:P25445:M67454
LNK  TNR6_MOUSE/125-161:P25446:M83649
LNK  TNR6_MOUSE/44-78:P25446:M83649
LNK  TNR6_MOUSE/81-123:P25446:M83649
LNK  TNR7_HUMAN/27-62:P26842:M63928
LNK  TNR7_HUMAN/65-104:P26842:M63928
LNK  TNR8_HUMAN/29-65:P28908:M83554
LNK  TNR8_HUMAN/69-106:P28908:M83554
LNK  TNR9_MOUSE/47-85:P20334:J04492
LNK  VA53_VACCC/37-72:P21071:M35027
LNK  VT2_SFVKA/28-61:P25943:A23727
LNK  VT2_SFVKA/64-104:P25943:A23727
AMK  xxxxx.xxxx...xxxx.xxxxxx.xxxxxxxxxxxxxxxxx.xxxx.xx
DMK  xxxxxxxxxxxxxxx...xxxxxxxxxxxx.........xxxxxxxxxxxx...xxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxx...xxxxxx
NAM  TNR3_HUMAN/83-124
ASQ  CAEN-.SYNEh..WNYL.TICQLC.RPCDPVMGLEEIAPCTS.KRKT.QC
DSQ  TGTGCCGAGAAT---...TCCTACAACGAGcac......TGGAACTACCTG...ACCATCTGCCAGCTGTGC...CGCCCCTGTGACCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGC...AAACGGAAGACC...CAGTGC
TRN  11011101101011011
NAM  TNR7_HUMAN/27-62
ASQ  CPER-.HYWA...QG--.KLC--C.QMCEP--GTFLVKDCDQ.HRKAaQC
DSQ  TGCCCAGAGAGG---...CACTACTGGGCT.........CAGGGA------...AAGCTGTGC------TGC...CAGATGTGTGAGCCA------GGAACATTCCTCGTGAAGGACTGTGACCAG...CATAGAAAGGCTgctCAGTGT
TRN  10010101100011011
NAM  TNR4_RAT/26-59
ASQ  CVKD-.TYPS...-GH-.K-C--C.RECQP--GHGMVSRCDH.TRDT.VC
DSQ  TGTGTTAAAGAT---...ACCTACCCCAGT.........---GGTCAC---...AAG---TGC------TGT...CGTGAGTGCCAGCCA------GGCCATGGTATGGTGAGCCGCTGTGATCAC...ACCAGGGACACT...GTATGT
TRN  10110101110011011
NAM  TNR1A_MOUSE/44-81
ASQ  CPQG-.KYVHs..KNN-.SIC--C.TKCHK--GTYLVSDCPSpGRDT.VC
DSQ  TGTCCCCAAGGA---...AAGTATGTCCATtct......AAGAACAAT---...TCCATCTGC------TGC...ACCAAGTGCCACAAA------GGAACCTACTTGGTGAGTGACTGTCCGAGCccaGGGCGGGATACA...GTCTGC
TRN  11111101111011011
NAM  TNR1A_HUMAN/44-81
ASQ  CPQG-.KYIHp..QNN-.SIC--C.TKCHK--GTYLYNDCPGpGQDT.DC
DSQ  TGTCCCCAAGGA---...AAATATATCCACcct......CAAAATAAT---...TCGATTTGC------TGT...ACCAAGTGCCACAAA------GGAACCTACTTGTACAATGACTGTCCAGGCccgGGGCAGGATACG...GACTGC
TRN  11111101111011011
NAM  TNR4_RAT/62-102
ASQ  CEPG-.FYNEa..VNY-.DTCKQC.TQCNHRSGSELKQNCTP.TEDT.VC
DSQ  TGTGAGCCTGGC---...TTCTACAATGAGgct......GTCAATTAC---...GACACCTGCAAGCAGTGT...ACACAGTGCAACCACCGAAGTGGAAGTGAACTCAAGCAGAACTGCACACCT...ACTGAGGATACT...GTCTGC
TRN  11011111111111111
NAM  TNR5_MOUSE/26-59
ASQ  CSDK-.QYLH...-D--.GQC--C.DLCQP--GSRLTSHCTA.LEKT.QC
DSQ  TGCAGTGACAAA---...CAGTACCTCCAC.........---GAT------...GGCCAGTGC------TGT...GATTTGTGCCAGCCA------GGAAGCCGACTGACAAGCCACTGCACAGCT...CTTGAGAAGACC...CAATGC
TRN  11011101101011011
NAM  TNR5_HUMAN/26-59
ASQ  CREK-.QYLI...-N--.SQC--C.SLCQP--GQKLVSDCTE.FTET.EC
DSQ  TGCAGAGAAAAA---...CAGTACCTAATA.........---AAC------...AGTCAGTGC------TGT...TCTTTGTGCCAGCCA------GGACAGAAACTGGTGAGTGACTGCACAGAG...TTCACTGAAACG...GAATGC
TRN  10010101100011011
NAM  TNR1A_RAT/127-166
ASQ  CKKN-.QFQRylsETH-.FQCVDC.SPCFN--GT-VTIPCKE.KQNT.VC
DSQ  TGCAAGAAGAAC---...CAATTCCAGCGCtacctgagtGAGACGCAT---...TTCCAGTGTGTGGACTGC...AGCCCCTGCTTCAAT------GGCACC---GTGACAATCCCCTGTAAGGAG...AAACAGAACACC...GTGTGT
TRN  11011101101011011
NAM  TNR1A_HUMAN/127-166
ASQ  CRKN-.QYRHywsENL-.FQCFNC.SLCLN--GTVHLS-CQE.KQNT.VC
DSQ  TGCAGGAAGAAC---...CAGTACCGGCATtattggagtGAAAACCTT---...TTCCAGTGCTTCAATTGC...AGCCTCTGCCTCAAT------GGGACCGTGCACCTCTCC---TGCCAGGAG...AAACAGAACACC...GTGTGC
TRN  10010101110011011
NAM  TNR16_CHICK/101-138
ASQ  CAYG-.YFQD...ELS-.GSCKEC.SICEV--GFGLMFPCRD.SQDT.VC
NAM  TNR16_RAT/110-147
ASQ  CAYG-.YYQDe..ET--.GHCEAC.SVCEV--GSGLVFSCQD.KQNT.VC
DSQ  TGTGCCTATGGC---...TACTACCAGGACgag......GAGACT------...GGCCACTGTGAGGCTTGC...AGCGTGTGCGAGGTG------GGCTCGGGACTCGTGTTCTCCTGCCAGGAC...AAACAGAACACA...GTGTGT
TRN  11011101111011011
NAM  TNR6_MOUSE/44-78
ASQ  CSEG-.LYQG...-G--.PFC--C.QPCQP--GKKKVEDCKM.NGGTpTC
DSQ  TGCTCAGAAGGA---...TTATATCAAGGA.........---GGC------...CCATTTTGC------TGT...CAACCATGCCAACCT------GGTAAAAAAAAAGTTGAGGACTGCAAAATG...AATGGGGGTACAccaACCTGT
TRN  11111101111011000
NAM  TNR16_RAT/33-65
ASQ  CSTG-.LYTH...SG--.E-C--C.KACNL--GEGVAQPCGA.NQ-T.VC
DSQ  TGTTCCACAGGC---...CTGTACACCCAC.........AGCGGA------...GAG---TGC------TGC...AAAGCCTGCAACTTG------GGCGAAGGCGTGGCCCAGCCCTGCGGAGCC...AACCAG---ACC...GTGTGT
TRN  11011101101011011
NAM  TNR3_HUMAN/43-80
ASQ  CRDQEkEYYE...PQH-.RIC--C.SRCPP--GTYVSAKCSR.IRDT.VC
DSQ  TGCAGGGACCAGGAAaagGAATACTATGAG.........CCCCAGCAC---...CGCATCTGC------TGC...TCCCGCTGCCCGCCA------GGCACCTATGTCTCAGCTAAATGTAGCCGC...ATCCGGGACACA...GTTTGT
TRN  10110101110011001
NAM  TNR1B_MOUSE/40-76
ASQ  CQISQ.EYYDr..KAQ-.M-C--C.AKCPP--GQYVKHFCNK.TSDT.VC
DSQ  TGCCAGATCTCACAG...GAATACTATGACagg......AAGGCTCAG---...ATG---TGC------TGT...GCTAAGTGTCCTCCT------GGCCAATATGTGAAACATTTCTGCAACAAG...ACCTCGGACACC...GTGTGT
TRN  10110101110011001
NAM  TNR1B_HUMAN/40-75
ASQ  CRLR-.EYYDq..TAQ-.M-C--C.SKCSP--GQHAKVFCTK.TSDT.VC
DSQ  TGCCGGCTCAGA---...GAATACTATGACcag......ACAGCTCAG---...ATG---TGC------TGC...AGCAAATGCTCGCCG------GGCCAACATGCAAAAGTCTTCTGTACCAAG...ACCTCGGACACC...GTGTGT
TRN  10010101110011011
NAM  TNR6_MOUSE/81-123
ASQ  CTEGK.EYMD...KNHYaDKCRRC.TLCDEEHGLEVETNCTL.TQNT.KC
DSQ  TGCACAGAAGGGAAG...GAGTACATGGAC.........AAGAACCATTATgctGATAAATGCAGAAGATGC...ACACTCTGCGATGAAGAGCATGGTTTAGAAGTGGAAACAAACTGCACCCTG...ACCCAGAATACC...AAGTGC
TRN  10010101100011010
NAM  TNR6_HUMAN/85-127
ASQ  CQEGK.EYTD...KAHFsSKCRRC.RLCDEGHGLEVEINCTR.TQNT.KC
DSQ  TGCCAAGAAGGGAAG...GAGTACACAGAC.........AAAGCCCATTTTtctTCCAAATGCAGAAGATGT...AGATTGTGTGATGAAGGACATGGCTTAGAAGTGGAAATAAACTGCACCCGG...ACCCAGAATACC...AAGTGC
TRN  10010101110011010
NAM  VA53_VACCC/37-72
ASQ  CDKG-.EYLD...KRH-.NQC--C.NRCPP--GEFAKVRCNG.NDNT.KC
DSQ  TGTGACAAGGGA---...GAATATCTTGAT.........AAGAGGCAT---...AATCAATGT------TGT...AATCGGTGTCCACCT------GGAGAATTTGCCAAGGTTAGATGTAATGGT...AACGATAACACA...AAATGT
TRN  10010101110011011
NAM  TNR8_HUMAN/29-65
ASQ  CHGNPsHYYD...KAV-.RRC--C.YRCPM--GLFPTQQCPQ.-RPT.DC
DSQ  TGTCATGGAAACCCCagcCACTACTATGAC.........AAGGCTGTC---...AGGAGGTGC------TGT...TACCGCTGCCCCATG------GGGCTGTTCCCGACACAGCAGTGCCCACAG...---AGGCCTACT...GACTGC
TRN  10010101100011011
NAM  CRMB_VARV/32-65
ASQ  CKDT-.EYKR...HN--.L-C--C.LSCPP--GTYASRLCDS.KTNT.QC
DSQ  TGTAAAGACACC---...GAATACAAACGC.........CATAAT------...CTG---TGT------TGT...TTATCGTGTCCTCCG------GGAACATACGCTTCCAGATTATGTGATAGC...AAGACTAACACA...CAATGT
TRN  10010101100011010
NAM  VT2_SFVKA/28-61
ASQ  CGGH-.DYEK...DG--.L-C--C.ASCHP--GFYASRLCGP.GSNT.VC
DSQ  TGTGGAGGACAC---...GACTACGAAAAA.........GACGGA------...CTG---TGT------TGT...GCATCCTGTCATCCA------GGGTTTTATGCCTCTAGATTGTGCGGACCC...GGGTCCAATACG...GTGTGT
TRN  10010101100011011
NAM  TNR6_MOUSE/125-161
ASQ  CKPD-.FYCDs..PGC-.EHCVRC.ASCEH--GT--LEPCTA.TSNT.NC
DSQ  TGCAAACCAGAC---...TTCTACTGCGATtct......CCTGGCTGT---...GAACACTGTGTTCGCTGC...GCCTCGTGTGAACAT------GGAACC------CTTGAGCCATGCACAGCA...ACCAGCAATACA...AACTGC
TRN  11011101111011011
NAM  TNR6_HUMAN/129-165
ASQ  CKPN-.FFCN..sTVC-.EHCDPC.TKCEH--GI--IKECTL.TSNT.KC
DSQ  TGTAAACCAAAC---...TTTTTTTGTAAC......tctACTGTATGT---...GAACACTGTGACCCTTGC...ACCAAATGTGAACAT------GGAATC------ATCAAGGAATGCACACTC...ACCAGCAACACC...AAGTGC
TRN  11011101111011011
NAM  CRMB_VARV/68-108
ASQ  CGSG-.TFTSr..NNHL.PACLSCnGRCNS--NQVETRSCNT.THNR.IC
DSQ  TGTGGTTCGGGT---...ACCTTTACATCTcgc......AATAATCATTTA...CCCGCTTGTCTAAGTTGTaacGGAAGATGCAATAGT------AATCAGGTAGAGACGCGATCGTGTAACACG...ACTCACAATAGA...ATCTGT
TRN  10010101110011010
NAM  VT2_SFVKA/64-104
ASQ  CEDG-.TFTAs..TNHA.PACVSCrGPCTG--HLSESQPCDR.THDR.VC
DSQ  TGTGAAGACGGA---...ACCTTTACGGCGagt......ACTAACCATGCC...CCTGCGTGCGTAAGTTGTcgaGGTCCGTGTACGGGG------CATCTATCCGAGTCTCAACCGTGCGATAGA...ACCCACGATAGA...GTCTGC
TRN  10010101110011011
NAM  TNR1A_RAT/84-125
ASQ  CDKG-.TFTAs..QNHV.RQCLSC.KTCRKEMFQVEISPCKA.DMDT.VC
DSQ  TGTGATAAAGGC---...ACCTTTACAGCTtcg......CAGAACCACGTC...AGACAGTGTCTCAGTTGC...AAGACATGTCGGAAAGAAATGTTCCAGGTGGAGATTTCTCCTTGCAAAGCT...GACATGGACACC...GTGTGT
TRN  10010101110011011
NAM  TNR1A_HUMAN/84-125
ASQ  CESG-.SFTAs..ENHL.RHCLSC.SKCRKEMGQVEISSCTV.DRDT.VC
DSQ  TGTGAGAGCGGC---...TCCTTCACCGCTtca......GAAAACCACCTC...AGACACTGCCTCAGCTGC...TCCAAATGCCGAAAGGAAATGGGTCAGGTGGAGATCTCTTCTTGCACAGTG...GACCGGGACACC...GTGTGT
TRN  10010101110011001
NAM  TNR1B_MOUSE/79-119
ASQ  CEAS-.MYTQv..WNQF.RTCLSCsSSCTT--DQVEIRACTK.QQNR.VC
DSQ  TGTGAGGCAAGC---...ATGTATACCCAGgtc......TGGAACCAGTTT...CGTACATGTTTGAGCTGCagtTCTTCCTGTACCACT------GACCAGGTGGAGATCCGCGCCTGCACTAAA...CAGCAGAACCGA...GTGTGT
TRN  11111101111011011
NAM  TNR1B_HUMAN/78-118
ASQ  CEDS-.TYTQl..WNWV.PECLSCgSRCSS--DQVETQACTR.EQNR.IC
DSQ  TGTGAGGACAGC---...ACATACACCCAGctc......TGGAACTGGGTT...CCCGAGTGCTTGAGCTGTggcTCCCGCTGTAGCTCT------GACCAGGTGGAAACTCAAGCCTGCACTCGG...GAACAGAACCGC...ATCTGC
TRN  11011111111111111
NAM  TNR8_HUMAN/69-106
ASQ  CEPD-.YYLD...EA--.DRCTAC.VTCSRD-DLVEKTPCAW.NSSR.VC
DSQ  TGTGAGCCTGAC---...TACTACCTGGAT.........GAGGCC------...GACCGCTGTACAGCCTGC...GTGACTTGTTCTCGAGAT---GACCTCGTGGAGAAGACGCCGTGTGCATGG...AACTCCTCCCGT...GTCTGC
TRN  11011111101111111
NAM  TNR7_HUMAN/65-104
ASQ  CIPGV.SFSPd..HHTR.PHCESC.RHCNS--GL-LVRNCTI.TANA.EC
DSQ  TGCATACCGGGGGTC...TCCTTCTCTCCTgac......CACCACACCCGG...CCCCACTGTGAGAGCTGT...CGGCACTGTAACTCT------GGTCTT---CTCGTTCGCAACTGCACCATC...ACTGCCAATGCT...GAGTGT
TRN  10010111110111011
NAM  TNR9_MOUSE/47-85
ASQ  CPPS-.TFSSi..GGQ-.PNCNIC.RVCAG--YFRFKKFCSS.THNA.EC
DSQ  TGCCCTCCAAGT---...ACCTTCTCCAGCata......GGTGGACAG---...CCGAACTGTAACATCTGC...AGAGTGTGTGCAGGC------TATTTCAGGTTCAAGAAGTTTTGCTCCTCT...ACCCACAACGCG...GAGTGT
TRN  10010101110011011
NAM  TNR16_CHICK/141-180
ASQ  CPEG-.TFSDe..ANFV.DPCLPC.TICEE--NEVMVKECTA.TSDA.EC
NAM  TNR16_RAT/150-189
ASQ  CPEG-.TYSDe..ANHV.DPCLPC.TVCED--TERQLRECTP.WADA.EC
DSQ  TGCCCAGAGGGC---...ACATACTCAGACgaa......GCCAACCACGTG...GACCCGTGCCTACCCTGC...ACGGTGTGCGAGGAC------ACTGAGCGCCAGTTACGCGAGTGCACGCCC...TGGGCTGATGCT...GAATGC
TRN  11011111111111100
NAM  TNR16_RAT/68-108
ASQ  CLDNV.TFSDvv.SAT-.EPCKPC.TECLG--LQSMSAPCVE.ADDA.VC
DSQ  TGCCTGGACAATGTT...ACATTCTCCGATgtggtg...AGCGCCACT---...GAGCCGTGCAAGCCGTGC...ACCGAGTGCCTGGGC------CTGCAGAGCATGTCCGCTCCCTGTGTGGAG...GCAGACGATGCA...GTGTGC
TRN  11011111101111111
//