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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF08125 alignment
(16 sequences with 263 aa)


MTLD_BACST/149-374 KYYGFLNCAVDRIVP------------NQKHDDPLSVVVEPFFEWVIEKRNIIG-AI...PPIQGAHFVDDLKPYIERKLFTVNTGHAIASYLGYYKKLQTIQEAMCDQEIRSDVEKALHESGAVLVKKY.GWNENEHQSYI..QKIIQRFINPSISDEVVRVARS-----PIRKLGANDRLIG-.-PATQYYDLFGQVPHGLVKGIAALLLFDYENDEEAVALQK---.....--TIQETGVEGALYQYSQLEKDHPLVIAI
MTLD_BACSU/147-366 ETLGFPNSAVDRIVP------------IQHHEDPLKVSVEPFFEWVIDESGFKG-KT...PVINGALFVDDLTPYIERKLFTVNTGHAVTAYVGYQRGLKTVKEAIDHPEIRRVVHSALLETGDYLVKSY.GFKQTEHEQYIknQRSLLKSFHFGRCDPRSEVTS--------QKTGRKCRLVG-.-PAKKIKE-----PNALAEGIAAALRFDFTGDPEAVELQA---.....--LIEEKDTAAYFKRCAAFSPMNRCTPSF
MTLD_ECOLI/148-374 EHVGFVDSAVDRIVPPS----------ASATNDPLEVTVETFSEWIVDKTQFKG-AL...PNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQTIRDAILDEKIRAVVKGAMEESGAVLIKRY.GFDADKHAAYI..QKILGRFENPYLKDDVERVGRQ-----PLRKLSAGDRLIK-.-PLLGTLEYG-LPHKNLIEGIAAAMHFRSEDDPQAQELAA---.....--LIADKGPQAALAQISGLDANSEVVSEA
MTLD_STRMU/151-374 DYIGFPNAAVDRIVP------------AQVHEDPLFVVVEPFSEWVVETAAMKN-PD...LKLSSVHYEENLEPFIERKLFSVNSGHATTAYTGAYFGAKTVLEALKDQQVKEQVKAVLGEIRQLLMAKW.QFKENDLKVYH..DIIISRFENPYIVDDVTRVART-----PIRKLGYDERFIR-.-PIRELKDRG-LSYEYLLQTVAYVFHYKDSNDEQSVQLKL---.....--LLQEKSLKAVVKEVTGLT-DAALIEEI
MTLD_ENTFA/148-371 QWIGFPDAAVDRIVP------------LQKHEDPLFVQVEPFCEWVIDDTNRKA-KE...IQLEGVHYVADLEPYIERKLFSVNTGHATVAYTGALLGYQTIDEAMQDALVVAQLKSVLQETGKLLVAKW.NFDEQEHAAYI..EKIIQRFQNKYISDAITRVART-----PIRKLGAQERFIR-.-PIRELQERN-LVSPHLLAMIGIVFNYHDPEDEQSRQLQE---.....--MLDQESVDTVIAEVTGIE-DPETVKNI
MTLD_CLOAB/148-373 KSVGFPNCTVDRIVPN----------VDIEKELPIDVAVEDFYEWDIEKNKVKI--N...NKIIGAEYVEKLDPYLERKLFLLNGAHATIAYLGYLKGYKYIHEAIKDKEINKIIVGFHSEAVQALSEKH.KIDIQILKEYS..NKLLKRFENEYLKDDVSRVGRD-----PMRKLSSNDRLIT-.-PLKLCCDLK-IDFTNILFGVASGYLFNYKEDEKAQGIQN---.....--IITKEGIKKAISNVSQIKEGDYLNNMI
YDFI_ECOLI/213-460 DNVTFPSTMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPE...WEKAGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKV-.--QGVDLQDYA..NRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAH.DSKFDLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQ.....SSAEGKARVQSLLAIKAIFGDDLPDNSLF
UXUB_ECOLI/216-463 ENVTFPCTMVDRIVPAATPETLQEIADQLGVYDPCAIACEPFRQWVIEDNFVNGRPD...WDKVGAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTVTNPAYRKAAFALMMQEQAPTLSMP.--EGTDLNAYA..TLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQN.GGSWRHLALGVAGWMRYTQGVDEQGNAIDVVDPMLAEFQK-IN.....AQYQGADRVKALLGLSGIFADDLPQNADF
YEIQ_ECOLI/216-462 EHVSFPGTMVDRIVPAATDESLVEISQHLGVNDPCAISCEPFIQWVVEDNFVAGRPA...WEVAGVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAHISDCMQDRAFRHAARTLMLDEQAPTLQI-.--KDVDLTQYA..DKLIARFANPALKHKTWQIAMDGSQKLPQRMLAGIRIHQGR.ETDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRE-LV.....AGSSSEQRVTALLSLREVFGDDLPDNPHF
YEI0_YEAST/229-475 DKVTSPNSMVDRVTPRCTDKERKYVADTWGIKDQCPVVAEPFIQWVLEDNFSDGRPP...WELVGVQVVKDVDSYELMKLRLLNGGHSAMGYLGYLAGYTYIHEVVNDPTINKYIRVLMREEVIPLLPKV.--PGVDFEEYT..ASVLERFSNPAIQDTVARICLMGSGKMPKYVLPSIYEQLRKpDGKYKLLAVCVAGWFRYLTGVDMNGKPFEIEDPMAPTLKA---.....AAVKGGKDPHELLNIEVLFSPEIRDNKEF
O08355_PSEFL/220-465 AHVSFPNAMVDRITPMTSTAHRLQLHDEHGIDDAWPVVCEPFVQWVLEDKFVNGRPA...WEKVGVQFTDDVTPYEEMKIGLLNGSHLALTYLGFLKGYRFVHETMNDPLFVAYMRAYMDLDVTPNLAPV.--PGIDLTDYK..QTLVDRFSNQAIADQLERVCSDGSSKFPKFTVPTINRLIAD.GRETERAALVVAAWALYLKGVDENGVSYTIPDPRAEFCQG---.....LVSDDALISQRLLAVEEIFGTAIPNSPEF
MTLK_RHOSH/207-450 AQVAFPNGMVDRITPATGPHER-ELAQGFGLADPVPVTCEPFRQWVIEDHFPAGRPA...LEKVGVTFTPHVHAYEAMKIRILNGGHAVIAYPSALMDIQLVHAAMAHPLIAAFLHKVEVEEILPHVPPV.--PDTSIPDYL..TLIESRFSNPEIADTTRRLCLDGSNRQPKFIVPSLRDNLAA.GTVPKGLVLLSALWCRYCFGTTDSGVVVEPNDPNWTALQD---.....RARRAKETPAEWLAMTEVYGDLAQN-DLL
O68111_RHOCA/209-452 ASVAFPNSMVDRITPATGDRER-AMAADLGLDDAAPVTCETFRQWVIEDKFPAGRPA...LEKVGVTFTPHVDKFETMKIRILNGGHAIIAYPGGLADIAFVHEAMADPQIRAFLNRVLTAEVLPIVPPV.--PGQDLNDYK..ALIIERFSNPEVADTVRRLCLDGSNRQPKFIIPSIRDRIAT.GGSFDGLVLLSALWCRYCFGTTESGAEIAPNDPNWERLVA---.....VAQAAKDRPAAWLEMEDIYAEVGRN-PAV
DALD_KLEPN/195-439 ANTTCPNTMVDRITPRPAADLPARIKAQAGIDDKAPVMGETFIQWVVENNFRDVRPN...LEAVGVEMVESVIPYEEAKIRILNASHSCIAWAGTLIGQQYIHESTLTDVIYAIADRYVTEDVIPCLGD-.--NGIDLPTYR..DVVLKRFTNPYIQDTNQRVAADGFSKIPAMIAPTLQECYQR.GVRPEATAMLPALFFVFMEQWHKGTLPYQYQDGILDAQAVH--.....-EMFEAQDPVAVFARDKALFGDLANNADF
UXAB_ECOLI/203-459 QANSFCSTLVDRIVTGYPRDEVAKLEEELGYHDGFLDTAEHFYLFVIQGPKSLATELrldKYPLNVLIVDDIKPYKERKVAILNGAHTALVPVAFQAGLDTVGEAMNDAEICAFVEKAIYEEIIPVLDL-.--PRDELESFA..SAVTGRFRNPYIKHQLLSIALNGMTKFRTRILPQLLAGQKAnGTLPARLTFALAALIAFYRGERNGETYPVQDDAHWLERYQQLWsqhrdRVIGTQELVAIVLAEKDHWEQDLTQVPGL
MTLD_MYCPN/135-355 TQVNFVDVVIDTIAPN-----------FEKKANFLDIYCEKYSEIYAETFPLEI---...--KGVNQKNS-LDRFIIKKLLLVNALHSVIGLLGFQQKLKYVHETLQVKSNLTFVEKLAQQIIDALCAEYpEFNKNNLLSYG..KNNLVRFANPKIQDLNTRLIRE-----PLRKLNQNERFYA-.--IYKLFKKNKIALNNILQVYLMVLKTNITDDTESQQIAK---.....--LI-NEKAWTELAKLSSLEESEWNLIKQ