EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF08114 - PMP1_2)
ATPase proteolipid family
(Pfam reference: accession no. PF08114)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
2 sequences @ 43 aa
(ave. pairwise identity: 0.97)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.03)
nucleotides
(available for above)
2 sequences @ 129 bp
(ave. pairwise identity: 0.92)
New Hampshire format
(total tree length: 0.09)
amino acids, restricted set
(corresp. to available nt seqs)
2 sequences @ 43 aa
(ave. pairwise identity: 0.97)
New Hampshire format
(total tree length: 0.03)