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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF08030 alignment |
| FRE6_YEAST/550-692 | TTCGACCATTTGCTGTTACTAAGTGGAGGAACAGGCTTGCCTGGTCCATTAGATCATGCCATTAAGCTGTCACGAAACCCTGATAAACCCAAG---------................................................................................................AGTATAGATTTGATCATGGCGATC---------...---AAAAATCCTTCTTTTCTTAAC..................................................................................................................------------GGCTATAAATCC---------------...---GAGATA---------...------...---------------------CTAGAGCTAAAAAATagc...CGATCCCACGTCAACGTGCAGGTTTACCTTACA---------------------------------------------------CAGAAA...------...------...---------------------------------------------ACAGCTGTTACAAAGGCAGCAAACGCACGAGACCAATTAATACATTTTGATGATATAATGACCGAACTGACA.................................------------...---...---------------------------------------AGCTTCGCCCACATCGGCAATgcaAGACCTAATTTTAGCAATGTAATTGAAAACGCAATAAAAAGTACGCCGCCTGGA---GATTCATTAGCGGTC............GTGTGCTGCGGCCCTCCTGTTCTGGTGGACGATGTTAGAAACACCGTTTCT |
| FRE5_YEAST/531-674 | TTCGAAAGCCTCCTGTTTATTGCCGGAGGGGCGGGTGTTCCTGGACCTCTGTCGATGGCAATAAAGGCAGGTCGCCAGGTCAAAAGCAACGATTCTCATCAA................................................................................................ATGATCAAATTTGTGTGGAGTGTA---------...---CGTAACCTTGATCTCTTAGAA..................................................................................................................------------GTGTATCGCAAA---------------...---GAGATA---------...------...---------------------ATGGTGCTAAAA---......GAGTTGAACATAGACACAAAAATTTACTTCACA------------------------------------GGAGAGCGAAAAGATGAATCG...------...------...---------------------------------------------AACACGGAGGAGGGAGCAATTGCTAATATGAGCACGGAAGGCAGACTGCTGACGACATCGAAATCAGCGGAA.................................------------...---...---------------------------------------ATGATTACTGATTTTGGA---...CGACCAAATATCGATGAGATAATTGAAGAAGCAGTAAGTGGTGCA------------AAATCTTTGTTGGTC............ACTTGTTGCGGGTCAGAGGGCTTTGTAGACAAGACACGAGAGTTGACGGCA |
| FRE4_YEAST/530-699 | TTTGATAATGTATTATTGTTGGCAGGTGGCTCAGGGCTTCCCGGTCCAATTTCTCATGCCCTTGAATTAGGAAAGACAACAGCTGCAAGCGGTAAAAAC---................................................................................................TTTGTACAGTTAGTCATAGCAGTA---------...---AGAGGACTAGACATGCTCAAC..................................................................................................................------------GCGTGTAAGAAA---------------...---GAACTA---------...------...---------------------ATGGCATTAAAG---......GGCTTGAATGTTCAAGTTCACATTTATAATTCTAAGCAAGAGCTAGCTTCGGCTGAAAAAATTTCCTCAAATGAAGTCAAAAACGGTGAA...------...------...---------------------------------------------ACGACAGCAGAGAAGGCCCCATCTAGTCTAAGCAATTCAGAAAAAGCTCCTTCTGAAAGTGAAAATACAGAA.................................------------...CTAcctCTTTCCCTGAATGACACGTCTATCTCCGATTTAGAATTTGCCACTTTCCATGTTGGA---...AGGCCAAATGTTGAAGAAATACTAAATGAATCTGTTAACCATTCT------------GGTTCACTTGCCGTC............GTATGTTGCGGACCACCTATTTTCGTCGACACCGCTAGAAATCAAACTGCC |
| FRE2_YEAST/537-691 | TACAATAATGTATTGTTACTCACTGGAGGTACCGGTTTGCCTGGACCTATTGCACATGCAATTAAACTTGGAAAGACGTCAGCGGCTGCTGGAAAACAA---................................................................................................TCTGTAAAATTAGTGATTGCAGTT---------...---AGAGGATTCGACGTACTCGAG..................................................................................................................------------GCTTATAAGCCG---------------...---GAGTTG---------...------...---------------------ATGTGTTTAGAA---......AATCTGAATGTACAGCTTCACATCTACAACACA------------------------------ATGGAAGTCCCATCATTAACCCCTAGT...------...------...---------------------------------------------GATAGTTTAGATATTTCTCAACAGGATGAGAAGGCTGATGAAAAAGGCACTGTTGTGGCAACTACTTTAGAA.................................------------...---...---------AAGTCTGCCAATCCACTTGGTTTTGATGGTGTTGTTTTCCATTGCGGG---...CGACCAAATGTTAAGGAACTTCTACATGAAGCGGCTGAATTGAGT------------GGCTCATTATCTGTG............GTTTGCTGTGGACCTCCTATTTTTGTTGACAAAGTGAGGAATGAAACCGCA |
| FREL_CANAL/496-649 | TGTAAGAATGTGGTTTTTGTTGCTGGTGGTAATGGTATTCCAGGTATTTATTCCGAATGTGTTGATCTAGCTAAGAAATCAAAGAACCAA------------................................................................................................TCGATCAAGTTGATTTGGATTATA---------...---AGACACTGGAAATCTTTAAGT..................................................................................................................------------TGGTTCACTGAG---------------...---GAATTG---------...------...---------------------GAATACTTGAAA---......AAAACAAACGTGCAAAGTACCATTTATGTTACTCAACCTCAAGATTGCTCAGGATTAGAATGCTTTGAACACGATGTTAGTTTTGAAAAG...------...------...---------------------------------------------AAATCCGACGAAAAGGACTCAGTAGAATCATCTCAATATTCACTCATTTCTAATATTAAGCAAGGGTTATCT.................................------------...---...------------------------------------CATGTTGAATTCATTGAAGGG---...CGTCCAGACATTTCTACGCAAGTTGAACAAGAGGTTAAACAAGCTGAT---------GGTGCAATTGGATTT............GTCACATGTGGACACCCTGCAATGGTTGATGAGTTGAGATTTGCAGTCACC |
| FRE1_YEAST/527-666 | AAAAGAAATCTGGTAGGTGTAGCCGCTGGTTTGGGTGTTGCGGCTATTTATCCGCACTTTGTCGAATGTTTACGGTTACCATCTACTGATCAACTT------................................................................................................CAGCATAAATTTTACTGGATTGTT---------...---AATGACCTATCCCATTTGAAA..................................................................................................................------------TGGTTTGAAAAT---------------...---GAATTG---------...------...---------------------CAATGGTTAAAGGAG......AAAAGTTGTGAAGTCTCAGTCATATATACTGGT---------------------------------------------------------...------...------...---------------------------------------------TCCAGTGTTGAGGACACAAATTCAGATGAGAGTACAAAAGGTTTTGATGATAAAGAAGAAAGCGAAATCACT.................................------------...---...---------------------------------------GTTGAATGTCTCAATAAA---...AGACCTGATTTGAAAGAACTAGTGCGCTCGGAAATAAAACTCTCAGAACTAGAGAATAATAATATTACCTTT............TATTCCTGCGGGCCAGCAACGTTTAACGACGATTTTAGAAATGCAGTGGTC |
| FRP1_SCHPO/414-548 | TATTCTTACCTCTTTTTGTTTGCTGGAGGTGTTGGAGTTTCGTATATCTTACCGATTATTTTGGATACTATAAAAAAGCAAAGCAGAACCGTT---------................................................................................................CATATAACTTTTGTTTGGTCTGCT---------...---CGTTCTTCGGCTTTATTGAAC..................................................................................................................------------ATCGTGCATAAG---------------...---TCACTT---------...------...---------------------TGTGAAGCTGTTCGT......TACACAGAAATGAATATCAACATATTCTGCCAT---------------------------------------------------------...------...------...---------------------------------------------------TTGACTAACAGCTACCCTGTCGAGGAAGTCTCTTCTCTAAACTCTCAAAGTGCTAGAAATTACAGT.................................------------...---...---------------------------------------TTGCAATACCTAAATGGA---...AGGCCTGATGTAAATGATTATTTTAAAGATTTTCTGCATGCAACTGGTACT------CAAACAGCCGCTCTT............GCATCATGCGGCTCGGATAAGCTTCTGAGACATCTTAAAAGCTGTGTCAAT |
| O94727_SCHPO/414-548 | TACTCTTATGTTCTGCTTATTGCGGGGGGCGTAGGGTTTTCATATACTTTGCCAATTCTTCGCGATTTAATTTTAAAAGAATGTAATGTTACT---------................................................................................................AGCATCACATTTATCTGGAGTTGT---------...---CGATCGCTTTCCCTATTAAAA..................................................................................................................------------GTTGCTTCGAAA---------------...---TCTCTA---------...------...---------------------AACTCGCTTTTACAT......CAGAGCAATGTTCGCCTAAAAATTATAAACCAT---------------------------------------------------------...------...------...---------------------------------------------------TTTACCGGCAGCATCTCATGTAAAGAGTCTTCTGAATTTTCGAACCAAACAACCGAAAATTCTGAA.................................------------...---...---------------------------------------ATGGAATTTTTTGATGAC---...AGGCCTGATCTAGACATGTACATTCAAAAATTTTTTGATTATGTCGGATAT------CAAACAGCTGCATTA............GCAGCGTGTGGTTCCCAGAGTTTTTTGAAACGCATCAAAAACTCCGTAAAC |
| P92949_ARATH/441-709 | CATGAAGCTTTGGTTATGGTGTGCGGAGGAAGCGGGATAACTCCGTTTATCTCTGTTATTCGTGATTTGATCGCCACAAGCCAAAAGGAAACATGCAAA---................................................................................................ATCCCAAAAATAACTCTCATTTGTGCGTTTAAGaagTCTTCAGAGATCTCCATGCTCGATcttgtcttgccattatccggtcttgagactgaactatcctccgacattaacatcaaaatcgaagccttcataacccgagataatgatgcaggagatgaagcaaaagctgggaaaATCAAAACTCTCTGGTTCAAACCA---------------...---AGTCTTTCAGACCAAtccATCTCAtcaATCCTCGGACCAAACTCATGGCTTTGGCTCGGTGCA......ATTCTCGCATCTTCGTTCTTGATCTTCATGATAATTATTGGTATCATCACTAGGTATTACATTTACCCGATCGACCACAACACCAACAAGatcTATTCTttgACTTCAaaaACCATCATATATATCTTGGTCATCTCCGTGAGCATAATGGCGACTTGTAGTGCGGCTATGTTGTGGAACAAGAAGAAGTATGGTAAAGTTGAAAGTAAACAGGTCCAAAACGTCGACcgtccatctccaacatcttctcctacctcatcaTGGGGTTACAATtccTTGagaGAAATCGAAAGTACGCCACAAGAATCGCTCGTGCAACGCACCAATCTGCATTTTGGAGAA...AGACCTAATCTCAAGAAACTTCTACTTGATGTGGAAGGT------------------TCGAGTGTGGGAGTT............CTTGTTTGTGGTCCTAAGAAGATGAGACAAAAGGTTGCGGAAATATGTTCC |
| O23122_ARATH/431-677 | CATGACTCTCTGGTTATGGTGAGTGGAGGCAGTGGGATAACACCGTTCATCTCCATAATCCGCGACCTACTCTACGTGAGCTCAACGAACGCTTACAAA---................................................................................................ACCCCCAAAATAACCTTAATATGCGCGTTCAAGaatTCTTCCGACCTCTCAATGCTCAAC...............ctaatcttaccgaactccaccgagatctcctcctttatagatatccagatcaaagcctttgtcacccgagagaaagtatcaacctgcaatatgaatatcATCAAAACCCTCAGTTTCAAACCA---------------...---TATGTCTCAGACCAAcccATCTCAccaATCCTCGGACCGAACTCCTGGCTGTGGCTGGCCACC......ATCCTCTCTTCTTCATTCATGATCTTTATAATCATCATCGCAATCATCTCAAGATATCACATTTACCCAATCGATCAAAGCTCGAAAGAG...TACACTtcgGCTTATacaTCTCTCATTTACCTTCTAGCAATCTCTATTAGCGTGGTGGCTACGTCTACGGTCGCTATGTTGTGTAACAAAAAGAGTTATTTTAAGGGTTTATATCAAAACGTTGACGCATTGTCT.................................------------...CCGttgATGATCGAGAGCTCGCCAGATCAGTTGCTACCGGAATTCACCAACATTCATTATGGAGAA...AGGCCAAATCTTAACAAGCTCCTAGTTGGTTTAAAGGGT------------------TCGAGCGTTGGAGTT............CTTGTGTGTGGTCCAAGGAAGATGAGAGAAGAGGTTGCAAAGATTTGTTCC |
| CY24B_HUMAN/400-550 | TATGAGGTGGTGATGTTAGTGGGAGCAGGGATTGGGGTCACACCCTTCGCATCCATTCTCAAGTCAGTCTGGTACAAATATTGCAATAACGCCACCAATCTGaagctcaaa.......................................................................................AAGATCTACTTCTACTGGCTGTGC---------...---CGGGACACACATGCCTTTGAG..................................................................................................................------------TGGTTTGCAGATCTGCTGCAACTGCTGgagAGCCAGATG---------...------...---------------------CAGGAAAGGAACAAT......GCCGGCTTCCTCAGCTACAACATCTACCTCACT---------------------------------GGCTGGGATGAGTCTCAGGCCAAT...------...------...------------------------------------------------------------------CACTTTGCTGTGCACCATGATGAGGAGAAAGATGTGATCACAGGCCTGAAA.................................------------...---...---------------------------------------CAAAAGACTTTGTATGGA---...CGGCCCAACTGGGATAATGAATTCAAGACAATTGCAAGTCAACACCCTAAT------ACCAGAATAGGAGTT............TTCCTCTGTGGACCTGAAGCCTTGGCTGAAACCCTGAGTAAACAAAGCATC |
| O81212_ARATH/736-904 | TACGACGTGGTACTCCTCGTAGGTCTCGGCATTGGAGCCACGCCTATGATCAGTATCCTTAAGGACATCATCAACAACATGAAAGGTCCTGACCGCGACAGCgacattgagaac......aataacagtaacaac.................................aatagtaaagggtttaagacaagg......AAAGCTTATTTCTACTGGGTGACT---------...---AGGGAACAAGGATCATTCGAG..................................................................................................................------------TGGTTCAAGGGAATAATGGAC------...---GAGATT---------...------...---------------------TCGGAGTTAGACGAG......GAAGGAATCATCGAGCTTCACAATTATTGCACG------------------------------AGTGTGTACGAGGAAGGTGATGCAAGA...------...------...---------------------------------------------GTGGCTCTCATTGCCATGCTTCAGTCGTTGCAACACGCTAAGAACGGTGTGGATGTTGTGTCGGGTACACGT.................................------------...---...---------------------------------------GTCAAGTCCCACTTCGCT---...AAACCTAACTGGAGACAAGTCTACAAGAAGATCGCTGTTCAACATCCCGGC------AAAAGAATAGGAGTC............TTCTACTGTGGAATGCCAGGAATGATAAAGGAATTAAAAAATCTAGCTTTG |
| O81210_ARATH/677-850 | TACGAGGTGGTTCTACTAGTTGGTCTCGGGATTGGAGCCACACCAATGATCAGTATCGTCAAAGACATTGTTAATAACATCAAGGCCAAGGAACAAGCCCAA........................ctaaaccgaatggagaatggaacaagcgaaccacaacgaagtaagaaagagagtttcaggacccgt......AGAGCTTACTTCTATTGGGTTACG---------...---CGTGAGCAAGGCTCTTTCGAT..................................................................................................................------------TGGTTCAAGAACATAATGAAC------...---GAAGTC---------...------...---------------------GCGGAACGAGATGCC......AACCGCGTCATCGAAATGCATAACTATTGTACA------------------------------AGTGTCTATGAAGAAGGTGACGCTCGT...------...------...---------------------------------------------TCCGCACTTATACATATGCTTCAATCACTAAACCATGCAAAGAACGGCGTCGACATTGTCTCTGGAACAAGA.................................------------...---...---------------------------------------GTTATGTCCCATTTCGCT---...AAACCTAATTGGAGAAATGTTTACAAGCGTATAGCTATGGATCATCCTAAC------ACCAAAGTTGGAGTG............TTTTACTGTGGAGCACCAGCATTGACAAAGGAGCTAAGGCATCTAGCTTTA |
| O81209_ARATH/707-885 | TTTGAAGTTGTTCTGCTAGTGGGTCTAGGAATCGGTGCCACTCCGATGATCAGCATAGTGAGTGACATAATCAATAACTTGAAAGGCGTGGAAGAAGGCAGTaaccgaagacagtcaccgatccataatatggtcacacctcctgtttctccatcaagaaaaagtgagacgttcagaaccaag...............AGAGCTTACTTCTACTGGGTCACA---------...---AGAGAGCAGGGGTCGTTTGAC..................................................................................................................------------TGGTTCAAGAACGTGATGGAC------...---GAAGTG---------...------...---------------------ACTGAAACAGACCGC......AAAAACGTAATTGAGCTGCATAATTACTGCACC------------------------------AGCGTTTACGAGGAAGGGGACGCGAGG...------...------...---------------------------------------------TCTGCACTTATCACGATGCTCCAGTCTCTAAACCATGCTAAGCATGGAGTGGACGTTGTGTCAGGAACACGT.................................------------...---...---------------------------------------GTCATGTCCCATTTCGCT---...AGGCCAAACTGGAGAAGCGTTTTCAAAAGGATCGCTGTGAATCATCCTAAG------ACTAGAGTCGGAGTG............TTTTATTGTGGAGCAGCTGGGTTAGTGAAAGAGTTACGACACTTATCACTG |
| O04020_ARATH/396-561 | TACGATGTATTGCTTCTAGTAGGTCTAGGGATCGGAGCGACGCCATTAATCAGCATAATCAGGGACGTCCTTAACAACATCAAGAACCAGAATTCCATCGAAcgaggcactaac......caacacataaaaaactatgttgcc..........................................acaaaa......CGAGCTTATTTTTATTGGGTAACA---------...---AGAGAGCAAGGATCATTGGAA..................................................................................................................------------TGGTTCAGTGAGGTCATGAAC------...---GAGGTA---------...------...---------------------GCTGAGTATGATAGT......GAGGGGATGATTGAACTACATAATTACTGCACT------------------------------AGCGTGTATGAGGAAGGAGATGCGAGG...------...------...---------------------------------------------TCAGCACTAATCACCATGTTGCAGTCATTGCACCACGCCAAGAGCGGCATTGACATCGTATCGGGCACTCGG.................................------------...---...---------------------------------------GTCCGAACCCATTTCGCT---...CGACCCAATTGGCGTAGTGTCTTCAAGCACGTCGCAGTCAACCACGTCAAT------CAACGAGTTGGGGTT............TTCTACTGTGGTAATACATGCATCATAGGAGAGTTAAAGAGACTGGCTCAA |
| O48538_ARATH/746-927 | TATGATGTTCTCTTATTAGTTGGTCTTGGCATTGGTGCAACTCCATTTATCAGTATCTTGAAAGATTTGCTTAACAACATTGTTAAAATGGAAGAGCATGCGgattcgatctcggatttcagtagatcatcagaatacagcacaggaagcaacggtgacacgccaagacgaaagagaatactaaaaaccaca......AATGCTTATTTCTACTGGGTCACA---------...---AGAGAACAAGGCTCTTTTGAT..................................................................................................................------------TGGTTCAAAGGTGTCATGAAC------...---GAAGTT---------...------...---------------------GCAGAACTTGACCAA......CGGGGTGTGATAGAGATGCATAACTATTTAACA------------------------------AGTGTGTATGAAGAAGGTGATGCTCGT...------...------...---------------------------------------------TCTGCTCTCATTACAATGGTTCAAGCTCTTAATCATGCCAAAAATGGTGTCGACATTGTCTCTGGCACTAGG.................................------------...---...---------------------------------------GTCAGAACACACTTTGCA---...AGACCTAATTGGAAGAAGGTTCTCACAAAGCTAAGTTCCAAGCATTGCAAT------GCAAGAATAGGAGTG............TTTTATTGCGGAGTACCGGTTTTAGGGAAGGAGCTTAGCAAACTATGCAAC |
| O81211_ARATH/748-931 | TATGATGTCTTGCTCCTCATTGGACTGGGAATAGGAGCTACTCCTTTCATAAGCATCCTGAAGGATCTGCTGAACAATTCAAGAGACGAACAAACAGACAATgaattcagcagatcggatttcagctggaatagctgtacatcttcatataccacagcaaccccaacttcaacacatggagggaaaaagaaagcagtgAAGGCTCACTTTTACTGGGTCACA---------...---AGGGAGCCAGGATCCGTTGAA..................................................................................................................------------TGGTTTAGAGGAGTAATGGAG------...---GAAATA---------...------...---------------------TCAGACATGGACTGC......AGAGGCCAGATTGAGTTGCACAACTACCTTACA------------------------------AGCGTATATGATGAAGGTGATGCAAGA...------...------...---------------------------------------------TCAACCCTGATAAAAATGGTCCAGGCTTTGAACCATGCCAAACATGGAGTTGATATTCTATCCGGAACACGG.................................------------...---...---------------------------------------GTGAGAACACATTTTGCA---...AGGCCCAACTGGAAGGAAGTCTTCAGTAGCATAGCAAGAAAGCATCCAAAT------TCGACAGTCGGAGTG............TTTTACTGCGGCATACAAACCGTGGCAAAGGAGTTGAAGAAGCAAGCACAA |
| FRE7_YEAST/423-605 | TTTACCAATGTCTACTTGATTTGCTCTGGTTCAGGTATATCTACATGCTTACCTTTCCTGCAAAAATATGGCCCCATACTCCATAAGACAAACTTAGAA---................................................................................................GTTATTACATTGGACTGGGTGGTA---------...---AGACATAGGGAGGATATATCA..................................................................................................................------------TGGATTAGAGATGAAATGTGTACCCTCtcaAATAATTTG---------...------...---------------------CGCCAGTTATTTTTA......GATGGGAAAATTGTGGTTAGAATTTACGTCTGCTCGGACAGTACCGTCCCTGGTATTATTAAAACTTTCCCTCAAACAATAGACACCGCC...------...------...---------------------------------------------AGTGACCAATCTGATTTAGCTAAAAGAGAAAAAGATACCGAATTCGGCCAGGATGATACTGAGTCAAATTCA.................................------------...---...---ACTTTCGACAAATCCAATAACGAATATAAAGGTCTCATCACCATTATTCCTTCC---...AAACCTGATTTGAATCAGGTCATTAATGATTACCAAATTGGGTTCAGGAACTGCTTCATTTGTTCAGGTTCTgacagcctaaggTATACCGTCGGAAATTCCGTGGCAGTTTACAGGCCAAGGTTTTTTCTAACA |
| YGR0_YEAST/371-557 | GGCACGAATATAGCTATTATATGTGGTGGGTCTGGTATATCTTTTGCCCTACCACTATTTAGGCATTTTTTTAACAAGGAGAATGTAAAA------------................................................................................................TACTTGAAAATGATCTGGCTGATA---------...---AAAGATTACTCTGAATATGAA..................................................................................................................------------CTTGTTTTGGAT---------------...---TATCTC---------...------...---------AAGACAAATGGGTTGACTTTTGAGAAAaaactcTCGAATAATAAGAGGATTTCAGTATTTATTAGTGGAGAATACACGGCGGAAACACGGTTAGACGAAATTACGACCAATATCGACGATGAA...------...------...---------------------------AACTCAGAATATGAAATGGGATCTTTCAACAATGAAGACGAAGACCTTTCGATTTCTAATTTCAATTCAGAAAATGCGGACAGCAATGAC.................................---AATACGCCAgagACAagtCATAGCCCCACAAAAGAGAATGGAAGCATGATCGAGGTAAAATCCAAACACAGTTTTACTcttTCCAACGAATTGAAGAGCTTCAACAATGAAAGTGCACAAGTGAACCAA---------AATGAAACATGGTTG............TTTTCATGTGGTCCTCCCTCGTTATTACAATTGTCTAAAAAATATTGTAAC |