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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07968 alignment
(19 sequences with 300 aa)


Q9L403_CLOPE/46-303 ASIDARFIDDKYSSEMTTLINLTG-FMSSKKEDVIKKYNLHDV-TNSTAINFP.---------VRYSISILNESINENVKIVD..SIP.KNTISQKTVSNTMGYKIG--GSI--EIEENKPK-....-ASIESEYAESSTIEYVQPDFSTIQTDHSTS-KASWDTKFTETTRGNYN...---LKSNNPVYGNEMFMYGRYTNV--PATRNIIPDYQMSKLITGGLNPNMSVVLTAPNGTEES-.IIKVKMERERNCYYLNWNGA------NWVGQVYSrlAFDTPNVDSHIFTFKINWLT
Q99SN8_STAAM/65-323 QSLQFNFLTEPNYDKETVFIKAKG-TIGSGLRILDPNG------YWNSTLRWP.---------GSYSVSIQNVDDNNNTNVTD..FAP.KNQDESREVKYTYGYKTG--GDF--SINRGGLT-....-GNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDhtrQLTNDSDNRT-KSEIFSLTRNGNL--WAKDNFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKS.QFVVHYKRSMDEFKIDWNRHGFWG--YWSGENHV..DKKEEKLSA---LYEVDWKT
Q57227_STAAU/60-310 QILTFNFIKDKSYDKDTLVLKAAG-NINSGYERPNPKD------YDFSKIYWG.---------AKYNVSI-SSQSNDSVNVVD..YAP.KNQNEEFQVQNTLGYTFG--GDI--SI-SNGLS-....-GGLNGNTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWG...PYGRDSFHPTYGNELFLAGRQSSA--YAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKS.KITVTYQREMDLYQIRWNGF------YWAGANYK..NFKTRTFKS---TYEIDWEN
Q54327_STAIN/60-310 QLLTFNFIKDKSYDKDTLVLKAAG-NINSGYKSPNPND------YIYSSFYWG.---------AKYNVSI-SAESKGAVNVVD..YAP.KNQNEEFQVQNTLGYSFG--GDI--SI-SKGLS-....-GGLNGSESFSETINYKQESYRTTIDKHTDNKTIGWGVEAHKIMNAGWG...PYGRDSFHDLYGNELFLGGRQSKL--NAGQNFLPTRQMPLLARGNFNPEFLSVLSHKPNGAKTS.KIKVTYQREMDEYTNYWNGF------HWMGTNYK..NQNNATFTS---FYEIDWDQ
Q9MBN2_9CAUD/60-310 QILTFNFIKDKSYDKDTLILKAAG-NIYSGYTQPTSDS------SINSQFYWG.---------AKYNVFV-SSESKDSVNIVD..YAP.KNQNEEFQVQQTLGYSYG--GDI--NI-INGLT-....-GGLNGSKSFSETINYKQESYRTTIDRKTNHKSIGWGVEAHKIMNNGWG...PYGRDSSDSLYGNELFLGGRQSSS--NANQNFLPTHQMPILARGNFNPEFISVLSHKQKDVKKS.KIKVTYQREMDRYENFWNNL------HWIGYNIK..NQKRATHTS---IYEIDWEK
O50604_STAAU/58-308 QILTFNFIKDKSYDKDTLILKAAG-NIYSGYTKPNPKD------TISSQFYWG.---------SKYNISI-NSDSNDSVNVVD..YAP.KNQNEEFQVQQTVGYSYG--GDI--NI-SNGLS-....-GGGNGSKSFSETINYKQESYRTSLDKRTNFKKIGWDVEAHKIMNNGWG...PYGRDSYHSTYGNEMFLGSRQSNL--NAGQNFLEYHKMPVLSRGNFNPEFIGVLSRKQNAAKKS.KITVTYQREMDRYTNFWINF------NWIGNNYK..DENRATHTS---IYEVDWEN
Q99SN7_STAAN/89-332 QNLQFDFIDDPTYDKNVLLVKKQG-SIHSNLKFESHKEE-----KNSNWLKYP.---------SEYHVDF-QVKRNRKTEILD..QLP.KNKISTAKVDSTFSYSSG--GKF-----DSTKG-....-IGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEV...-------KNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKT-.QFEVTYTRNQDILKNRPGIH------YAPPILEK..NKDGQRLIV---TYEVDWKN
Q53703_STAAU/57-299 QNVQFDFVKDKKYNKDALIIKMQG-FINSRTTFNDVKQN-----RANKRMVWP.---------FQYNIGL--TSKDQNTSLIN..YLP.KNKIETVDVGQTLGYNIG--GKF-----QSVPS-....-IGGNGSFNYSKSIKYSQKSYVSEVEQQSSK-TIKWGVKANSFVIAGHR...-------WSAYDELLFIRNTTRGP--NARDYFVDDNELPPLITSGFNPSFIATVSHEKDSGDTS.EFEITYGRNMDVTYA----TYLPKLGLYPERKHN..EFVNRNFVV---KYEVNWKT
O54081_STAAU/57-305 QNVQFDFVKDKKYNKDALIVKMQG-FINSRTSFSDVKGRGY---ELTKRLIWP.---------FQYNIGL--TTKDPNVSLINsiTLP.KTKIETTDVGQTLGYNIG--GNF-----QSAPS-....-IGGNGSFNYSKTISYTQKSYVSEVDKQNSK-SVKWGVKANKFVTPDGK...-------KFAHDRYLFVQ-SPNGPTGSAREYFAPDNQLPPLVQSGFNPSFITTLSHEKGSKLIRvNLKFSYGRNLDITYA----TLFPRTGIYAERKHN..AFVNRNFVV---RYKVNWKT
Q54326_STAIN/58-301 QNIQFDFVKDPKYNKDALIIKMQG-FIKSRTSFTDVKGKGY---ESTKRILWP.---------FQYNIAL--KTNDPNVFLIN..YLP.KNKIESIDVSQTLGYNVG--GNF-----QSAPL-....-LGGKGEFNYSKKISYTQKNYISEVAQQNSK-NIRWEVKANSFNTENGQ...-------VSAYDRHLFVR-SPIGP--NARDFFVPNDELPPLIQSGFNPSFIATVSHEKDKGDTS.EFEIAYGRNLDITYA----TFFPRTGIFAERRHN..ALMNRNLVT---KYEVNWKT
Q9AFB0_STAAU/31-277 QNIQFDFVKDKKYNKDALILKMQG-FISSRTTYYNYKKT-----NHVKAMRWP.---------FQYNIGL--KTNDKYVSLIN..YLP.KNKIESTNVSQTLGYNIG--GNF-----QSAPS-....-LGGNGSFNYSKSISYTQQNYVSEVEQQNSK-SVLWGVKANSFATESGQ...-------KSAFDSDLFVGYKPHSK--DPRDYFVPDSELPPLVQSGFNPSFIATVSHEKGSSDTS.EFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHN..AFVNRNYTV---KYEVNWKT
HLGA_STAAM/58-298 QNIQFDFVKDKKYNKDALVVKMQG-FISSRTTYSDLKKY-----PYIKRMIWP.---------FQYNISL--KTKDSNVDLIN..YLP.KNKIDSADVSQKLGYNIG--GNF-----QSAPS-....-IGGSGSFNYSKTISYNQKNYVTEVESQNSK-GVKWGVKANSFVTPNGQ...-------VSAYDQYLFAQ-DPTGP--AARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKS.EFEITYGRNMDATYA-----YVTRHRLAVDRKHD..AFKNRNVTV---KYEVNWKT
Q9EVA1_BACCE/64-329 MSLKVTFIDDPSADKQIAVINTTGSFMKANPTLSDAPVDGYPIPGASVTLRYP.---------SQYDIAM--NLQDNTSRFFH..VAP.TNAVEETTVTSSVSYQLG--GSIKASVTPSGPSG....ESGATGQVTWSDSVSYKQTSYKTNLIDQTNK-HVKWNVFFNGYNNQNWG...IYTRDSYHALYGNQLFMYSRTYPHETDARGNLVPMNDLPALTNSGFSPGMIAVVISEKDTEQS-.SIQVAYTKHADDYTLRPGFT--FGTGNWVGNNIK..DVDQKTFNK---SFVLDWKN
O05387_BACCE/62-313 NSIKVSFIEDPYADKKIAIVTTDGSNIDAKYTINGG--------YYNAGLKWP.---------SAYHTEA-EITSGDSAQFHK..AAP.VNTMTSAKVTSEVGYTLG--GSVKVGVNDKGPNA....DASITGSFAWKESVSYDQVDYKTVLETHTDK-KLNWKVGFQSFNFPEWG...IYNRDSFNTFYGNQLFMKSRSYN---EGTNNFVSKDTVPALTGYGFSPNVVAVITADKTESTS-.DLKITNRRISDQYNIEWVSS------KWWGTNNK..DTYNEFFTN---NYKLDWKN
VVHA_VIBVU/71-331 RSVQSATSDGFTPDAKIVRFTVDADKPGTGIHLVNELQQ-----DHSWFQSWAnRRTYIGPFASSYDLWV-KPVSGYTPKKAR..DLP.QNENKNYQHRDTYGYSIGINGKVGAEVNKDGPKVgg..EVSGSFTYNYSKTLVFDTKDYRINNRSSLSDFDISFEREFGECDELRRQ...----------------ELGCYFTAAHWGSGWVFDKTKFNPISYSNFKPNYDVLYEAPVSETGVT.DFEMGVKLNYRARFGTVLPSALFSVYGSAGSSTN..SSTVKQRIR------IDWNH
HLY1_AERHY/180-440 RSLQFGNTASATPDAKIVRISLDEESAGAGIQLNEDLSWSENIADYLLLDGWA.RDYATDAIAQDYRFTT--EASNTKAAVLK..SLP.TNLNSKYEHREISGFEVGVTGGV--EVNKDGPRPswrrRPSSASSASSPTTPRITGLNAPAERPEGEFQ-LGARS-IRDRRVPA--L...-----------------LQDGHVWAWLRR-GSQPHPAAQ---LQGVCAESDVIYKAAPDETGST.EFKIDSSVNIRPIYTGIYKHYYVVGAHVSFQGFE..DTDKRRRVAASTSFKVDWNH
O54395_AERHY/222-484 RSLQFGNTGSATPDAKIVRISLDEESAGAGIQLNEELSWSENITDYLLLDGWA.RDYATDAIAQDYRFSI--EASNTKAAVLK..SLP.TNLNSKYEHREISGFEVGVTGGV--EVNKDGPKA....KLEASAKFSQQRQLAYNTQDYRVERSAPSAQ-KVSFSWVRDQYATAESL...-----------------LSSKTATVWGMG-YDVDHNRIQPLSYKGFVPNLDVIYKAAPDETGST.EFKIDSSVNIRPIYTGIYKHYYVVGAHVSFQGFE..DTDKRRRVTASTSFKVDWNH
O07850_VIBAN/214-474 RSLQYGTL-ALQHRTENCRISLDDDTTGAGI-ISMTLDYRQSGADYVTLDAYF.RDWSTDAIAQDYQFVF--NSSNNKAQILK..TFPrENLNAEYEVKEVSGFQLGVSGGV--EVSADGPKG....KLEANASYNQSRWLTFKTHDYRVERSTNNAQ-NVSFKWNRSQYATAESM...-----------------MNRSYDAIWVNT-YPVDTNRINPIGYASFVPKMDVIYKAAPNVTGTT.EFTIDSSVNIRPIYNGAYKHYYVVGGHQSYHGLK..NT-TRRRVSKVTSFTVDWEH
O06693_VIBMI/218-480 RSLQYGIVGSATPDAKIVRISLDDDSTGAGIHLNDQLGYRFFKAGYTTLDAYF.REWSTDAIAQDYRFSF--NASNDKAQILK..TFPvTNVNANFERKEVSGFELGVTGSV--EADKNGPKA....KLEAKASYTQSRWLTYNTQDYRIERSAKNAQ-NVSFTWNRQQYATAESL...-----------------LNRSTDALWVET-YPVDVNRISPLSYASFVPKMDVIYKASPKETGST.VFVIDSSVNIRPIYNGAYKHYYVVGSHQSYHGFE..DT-PRRRVTKSASFTVDWDH