EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07927 alignment
(40 sequences with 210 bp)


Q9F561_ECOLI/3-60 TCTGCTGACCTGTTGAAAGAACTGATAGCTGCTGGTTGCGAGTTGAAACGGCATAAGGCA............AGCAGTCACCAG............ATATGGTGGTCGCCAATAACAGGAAAA.........ACTTTTCCTGTTCCT---CATCCTAAAAAGGACTTGCCGCTAGGTACTGTCAGATCGATCAAAAAAATGGCGGGGATT
Q7MBH8_VIBVY/3-60 TCTAAAGACCTAATAGATGAACTACTCGCCGCAGGATGTGAGTTTGTAAGGCATGGCAAA............GGAAGTCACCAG............ATCTGGAAATCTCCAATCTCTGGTAAA.........AAATTTCCGGTGCCT---CACCCGAAAGGCTCCTTACCAATAGGCACAGTACGTTCTATCAAAAAAGACGCGGGCATC
Q73QJ1_TREDE/5-60 GAAAAAATTGTGAGAGAAATATTGCGTAAAAACGGGTGTGCTTTTGTAAGGCACGGCAAG............GGCGATCATGAC............ATTTGGTATAGTCCAATAAACGATTGC.........CGTTTTACCGTTGAT---------TCCAAAATAAAATCACGGCATACCGCTAATGCTATCATGAAGCAAAGCGGTATA
Q72GG3_THET2/5-60 GCTCCAGAGGTCAAGCGCCTCCTTCGGGAGGCGGGATGCTACCCCGTGCGTCAGGGCAAA............GGGGACCACGAG............ATTTGGTTCAGCCCAATCACGGGCCGC.........AAGTTCGTGGTGGAC---------AGCAAGATAAAGTCTCGCCACACGGCTAACGCGGTCTTGAAGCAGGCTGGGTTA
Q8DXL4_STRA5/3-58 GAGCGAGAGCTTAAGAAAATTGCTAAGAAGCAAGGTTTTAGTAAAACTAACTTTGGCAAA............GGGTCACACGAA............GTTTGGAAACATCCAGACGGACGG---.........ACAGTGACGATACCTAAGCCAAAGGAAAAAGATTACAGACCAGGCACACTGAACAACATTCTCAAAGTC------TTG
Q73LM4_TREDE/8-64 GCAAAAGAAATAGAAAAAATACTAAAGGCGGATGGTTGG---TATTTTGTAACAGCAAAA............GGTTCTCATAAT............CAATATAAACATACTGTAAAATCCGGA.........AAAGTTACGGTCCCAAATCAT---AAAGGAGATATACCGATAGGAACCGTGAAAGCAATTCTAAAGCAGGCAGGATTG
Q9A3L9_CAUCR/3-59 AGTCGTGAGGTGATCGCGGCGCTGGAAGCCGATGGCTGG---GTCGAAGTCGCACGGCGC............GGTTCTCATGCG............CAGTTCAAGCACCCAACCAAGTCCGGG.........CGCGTGACCGTGCCG---CACCCCAAGCGTGACTTGCCGCTAGGAACCCTGCGCTCGATCGAGCGTCAGGCCGACCTG
Q98J18_RHILO/3-59 AGCGCCGAAATTATCCGCCAGTTGCAAGCTGATGGTTGG---TTCGAGGTTGCCCGAAAG............GGCAGCCATGCG............CAATTCAAACACCGTGACAAGCAAGGG.........CGGGTCACCGTCCCT---CATCCCAAGCGCGATATCCCAATAGGCACTCTACGCAGCATCGAAAAGCAATCTGGACTG
Q92K60_RHIME/3-59 AGCGGCGACATTATTGCAGCATTGCAGAAGGACGGATGG---TACGAGGTTGCGACCAAG............GGCAGCCACGTT............CAATTCAAACATCCGAAAAAGCACGGC.........CGGGTTACCGTTCCT---CACCCGAAGAGGGATCTACCAATCGGTACCCTCAGGAGCATTGAAAAGCAGTCCGGTTTG
Q73KG6_TREDE/6-62 TCCCGTGAAGTTATAAAAATATTACAAAATGACGGTTGG---TATGAAGTGGCTGTTGTT............GGGAGCCATCAC............CAGTTTAAGCATTCTATAAAAAAAGGA.........CGTGTAACCGTAAAA---CATCCTGATAAAGATATACCGATTGCGACATTAAAAACTATTGAAAAACAATCAGGGATA
Q93MC0_CLOPE/6-62 TCAAGAGAAATAGTGAAAATCATTACTAAGGATGGTTGG---TATGAAGTTAATTGTGTT............GGTGACCATCAC............CAATATAAACATCCTACTAAGAAGGGG.........AGATTAACAATTCCA---CATCCTAAGAAGGATTTACCAATAGGTACTGTAAGAAGTATCTTTAAACAAGCTGGAATT
Q7W8Q4_BORPA/3-59 AGCACAGACCTGATCCAGCAACCGAAGGCCGACGGCTGG---TATCGCGTGCATACCGTG............GGTTCACACCAC............CAGTACAAGCACCCGACCAAGCCCGGC.........AAGGTCACCGTGCCG---CATCCCAGGAAGGGCCTGCCGACAGCGACACAGCGCAGCATCCTTAAGCAAGCCGGCCTG
Q8YTK3_ANASP/3-60 GTTAGTGAAGTTATTAAAAGATTGGAAACCGATGGTTGG---TATTTAGCTAGAACTAAA............GGTAGTCACAGA............CAGTTCAAGCATCCCGATAAAACTGGT.........ACAGTAACAGTGTCTGGTAAGCCGAGTGTTGATGTACCAATTGGTACTCTGAAAAATATTTGGAGACAGGCTCAATTG
Q8TNZ2_METAC/3-60 GTACGTGAGGTCATAAAACATCTTGAAGCCGATGGCTGG---TATCTGGTTGCAACAAAA............GGCAGCCACCGG............CAATACAAACATCCTGCTAAACCAGGT.........AGGGTGACAATTGCAGGTCATAGTGGAGATGATCTTGCTCCAGGAACATTGAACAGCATATTAAAACAAGCTCAATTA
P73830_SYNY3/3-60 GTTAAAGTAATCCTCAAAATCTTAGAACGGGATGGTTGG---TACGTAGCTCGAATACGG............GGAAGTCATCGG............CAATTGAAGCACCCCCACAAGGCAGGT.........TTGGTAACTGTACTGGGCAAACCCAGTGACGAATTAGCCCCTGGGACACTAGCCAGTATTCTCAAGCAATCTTCTCAA
Q886E5_PSESM/3-59 AGCAGGCAATTGGTAAAGGAGCTTGAAGCAGATGGTTGG---GTTCTTGATCGTGTCACC............GGCAGTCACCAT............ATGTTCAAACACCCAGAAAAGTCTCAA.........ACAGTTCCGGTGCCG---CATCCCAAGAAAGACTTGCCGCTTGGAACAGTAAAGGCCATCAGAAAGCTTGCCGGATTG
Q7VZH0_BORPE/3-59 AGCAAAGAACTGATCAAGCAGCTTGAGCGGTCCGGGTGG---ACACTGCGGGGCGTTAAG............GGATCCCACCAC............GTTTTCACCCACCCAGACCGCCCCGGA.........CATATCAGCGTCCCT---CACCCTAAAAAGGATCTCGGCATCGGACTACTAAACAGCATCCTCAAAGCAGCTGGTTTG
Q8ZF99_YERPE/65-121 AGTTCGGAGCTGATAAAACTGCTCGAAACAAATGGTTGG---AAGTTGATGAGAGTTAAA............GGCAGTCATCAT............CAATTCAAACATCCTGATTTCGCGGCA.........GTCATAACAGTACCG---CATCCCAAAAAGGATGTTAAACCGGGAACCCTCCGGCAAATTCTGAAAGATGCAAACCTT
P72914_SYNY3/9-65 GCCAAAGATTTTATTCGAGTAATCAAAAAGCTCGGATTT---TTTCTGGAGCGCCAGAAA............GGGAGCCATGCC............ATTTATAAAAATACCCAGGGTAAT---.........CGAGTTGTGGTTCCCATCCATCCCGGAAAAGATTTAAAGCAGGGGACACTGATGGGCATGATTAAAGATATTGGACTT
Q8P1Q8_STRP8/5-60 CCAAAGCAGATGATAAAACTGCTAAAAAAGAATGGGTTC---TACGAAGTCAGTCAAAAC............GGAAGTCACAAA............AAATTCCGAGACAATAACGGACAT---.........CAAACCATTGTTCCAATGCAC---AATAAAGACCTCGGAAAAGGTCTTGAAGATACCATTCTAAAGCAGGCGGGTTTA
Q9X138_THEMA/9-65 CCAAAAACTATGGAAAAGGTTTTACTGAAACTTGGATTT---CAACGTGTTCGCCAAAAA............GGAAGTCATGTG............TTCTACAGGCACAGCAATGGAAAG---.........TATACGACCATCCCATTTCATGCAAAAGAGACTTGCCCAAGTCACTTAATAAGAAAAATCATCCGTGAAGCGGGTATA
Q8TIM1_METAC/9-65 GCAAAAAAAGTTGTAAAAGCACTTGAAAATATAGGTTTC---GAGCAGATAAGGCAGAAG............GGTAGTCACTTA............TTTTTACGGCATCCAGATGGAAGG---.........ACCACTATAGTCCCAATGCACCCGACAGAAAAAATCGGAAGTGGAATGATCAATAAAATAATAAAAGATGCAAAAATT
Q8PVN8_METMA/9-65 GGGAGGGATATGTGTAAAATACTTGAGATGCTTGGCTTT---CAAAAGGTGTATCAGGTT............GGAAGCCATGTG............AGATACGTTCATCCTGACGGTAGA---.........AAGACTGTAGTGCCTGTTCATGGAAATGAAGATTTAGGCACTGGTCTGATCAAAGAAATCCTGAAGCAGAGCAGGATT
Q8YVZ2_ANASP/9-65 GGAAAAAAAGTTATTAATACCCTTGAGAAATTAGGATTT---CAAGTGGTGCGTCAACGA............GGTAGTCACGTA............CAAATGGAACATGATGACGGTCGT---.........TTAGTCACTGTTCCTGTTCATGCTGGTAAAACAATAGGTAGAGGGTGGCTCAGTAAAATATTACGCGATGCTGAACTT
Q72HU0_THET2/10-66 GGCCAGGAGCTCGTCCGCCTCCTGCAGGAGGAGGGGTTT---CAGGTGGTGTGGGTCCGG............GGAAGCCACGTG............CGCCTTCGGCACCCCGACGGCCGG---.........GTCACCACGGTGCCCGTGCACCCGGGGGAGACCCTAAGGCCGGGAACCCTCCTCGCCATTCTCAAGGACGTGGGCTGG
Q8CYE1_STRR6/14-68 CAAAAAGAGATGGTTAAACTCCTTACGGCCCATGGTTGGATAAAGACTAGAGGCGGTAAA............GGCTCCCATATT............AAAATGGAAAAGCAAGGGGAAAGA---.........CCTATCACAATCCTT---------CATGGTAAGCTGAATAAGTACACTGAAAGAGGGATAAGAAAGCAAGCTGGGTTG
Q74XS2_YERPE/3-63 AGTGGCGAATTAATAAAACGCTTAGAGGATGCAGGATGG---CAAATCAGAGGAGGCAGAaaaacgaatagtGGTAGCCATGTC............ACGCTGTGCAAACCCGGTGTACGCAAA.........ATCATTACGCTACCT---TACCCACGTAAGGATATATCCAAAGGTTTACTGAGACAGGCTCAGAAAATTGCCGGAATT
Q8U199_PYRFU/9-63 GGTGAAGACGTTATCAAAGCCCTTCGAAAGCTGGGTTAT---GTGCCTGCAAGGCAAAAG............GGTTCTCATGTT............GTGCTCACGGGACCTAGTGGAAAA---.........ATCATTGTTATCCCATTGCAC------AAGAGGATAAAGACTGGTCTTCTCAGGGCCATCATTCGAGAGGTTGGGGTT
Q8Q0V0_METMA/9-64 GGTATGCAGGCAATCAAAGCCTTTTCTAAAGCTGGCTGG---CTCCCGCACCGACAGGTG............GGCAGTCATGTT............GTCCTTAGAAAGGAAGGATCA------.........AAAGTTACGCTGACTGTCCCGAAGCACAAAGAACTGAAGCCGGGCCTTTTAAGAAATTTGATAAAAGCTTCAGGGCTG
Q854W6_9CAUD/17-81 TCACGGGACGTGAACCGCAGGATCGAATCGCTCGGCGGC---ATCGAGACGCGCCAGCGC............GGCAGTCATCGCcgctacgccgtcGTCTACACCGACAAGTCGGGCAACGAGcgcactgcgTTCACTACCGTGCAGCAGCACAAGGGCCAGGAGATTCCCCTCGGAACCCTCCGGGCGATCCAGCGGGATCTCGAACCG
Q9HSX3_HALN1/8-70 GGCCGGGACGTTGTGAAGGCGATGGTCAATAGCGGGATTTACGAGTGGGATCGAACGAAC............GGCGACCACGCA......atcctcGTGTGGAACCCGCCTGAAAGCCATGACtcccca...CGACGAACAGTTCCGGTCCCGCTTCACGATGAACTCCGCGAAGGGACTCTCAAAGAGATTGGGGAGCAAGCGGGGATG
Q8Q0H6_METMA/9-66 GCTCTTGAGGTCATCAAGGCTCTCAACAGCCAGGGTTTT---CAGGTCATATCTCAGAAG............GGCAACCATATC............AAAATGAAAAAGAAGGCTCCGGATAAA.........ATTCTCGTTGTTATTGTCCCGGATCATCCCGAAATTCCGTCAGGGACTTTGAAATCTATAATCAGGCAAGCCGGAATG
Q72GZ1_THET2/10-65 CGGAGGGAGCTCGTGGCCAGGCTTAAGGCCTTGGGGTTT---TCCGGGCCCTACACGGGG............GGCAGGCACCAG............TTCATGGTGCGGGGGTCCATC------.........CGCCTGGTCTTGCCCAATCCCCACCGAGGGGAGATTGGCGTGGACCTTCTAAAGCGCATCCTGAGGCAAGCGGGGATA
Q72FJ0_DESVH/3-57 ACGACGGAACTGGTAAAACGGCTGAAGGGGCTAGGGTTT---CAAGAGGTCGGGGGTAAA............---AAGCACATC............AAATACAGACACCCCGACGGA------.........AGATGGACGGTCATCAGCAAGGGTAGCCACGAAATCTCCGTCGACCTCTTGAAGAACATGGAAAAGCAAATCAAGGAA
Q9ZKH5_HELPJ/6-60 GCTAAAGAAGCAGAGAAACTATTATTGCAGAATGGATTT---GTTTTCTCTAGGCAAAAA............GGTAGCCATAGA............ATTTATGTGAAAGATAAAATC------.........AGGCAGGTTTTGCCTTTTCATTCTGGCGAAATCTTGCACCCTAAAATAGTGAAAGAAATCATGGAAAATACC---CTT
Q7N1I2_PHOLL/3-57 CAAAGCGAGTTTAGACGGTGGCTGGAAGCTCAAGGCGTC---GAAGTTTCAAATGGGACA............---AACCATCTG............AAACTGAGATACCAGGGGAAA------.........CGAAGCATTATGCCGAGACACCCTAGCCAAGAGATCAAAGAGCCGCTGAGGAAAGCAATCATTAAGCAATTAGGATTG
Q7MZD9_PHOLL/17-71 CAAAGCGAGTTTCGCCGGTGGCTTAAAGCTCAGGGAGCA---GAATTCAAAGATGGGACT............---AACCACTTG............AAAGTTTTCCTGAACGGTAAG------.........CAAACCACGATGCCAAGGCACCCTAGTAAAGAAATCCCAGAACCACTGAGGAAATTAATATTAAAACAGCCAGGCATC
Q6J2J8_PSEYM/50-105 TGCAGCGAGTTTCGGCGATGGCTACAGGCTCAAGGCGCT---GAGTTCAAAGCGGCCAAG............GGCAGCCACTTC............AAGGTGTACTTGAATGGCAAG------.........GCGACCATCTTTGCGGACCACGGCAGCAAGGAAATGCACGAAGGGTTACGTAAATCGATCATCAAACAGCTGGGCCTC
Q72BZ3_DESVH/3-57 CGTTCAGACATCCTTAGGGCTCTTCAACGCGCAGGCCTC---GTGCTTGACGAGGGT---............GGCAAACACACC............AAGGTTTACACACCTGATGGA------.........AGATTTGTCGCAACCGTTCCTCGCCACAAGGAAATCAAAGATTTTCTTGCCAAGAGGATTGCGGAACAGACTGGCGTG
Q7UUJ3_RHOBA/3-58 CGCCGTGACCTCATCCGACATCTGGTCAGCTGTGGCTGC---GTTTTAGTGCGCGAAGGC............GGCAACCATTCT............TGGTGGGGCAATACTACTACTGGTGCA.........CGGTCTGCGGTGCCGCGTCAT------CGCGAGGTTTCTGATTACTTGGCACGCAAAATCTGCCGTGATCTTGGGATC