EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF07875 - Coat_F)
Coat F domain
(Pfam reference: accession no. PF07875)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
17 sequences @ 65 aa
(ave. pairwise identity: 0.27)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 11.36)
nucleotides
(available for above)
17 sequences @ 195 bp
(ave. pairwise identity: 0.42)
New Hampshire format
(total tree length: 8.08)
amino acids, restricted set
(corresp. to available nt seqs)
17 sequences @ 65 aa
(ave. pairwise identity: 0.27)
New Hampshire format
(total tree length: 11.36)