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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07732 phylogeny
for restricted amino acid alignment


 
(((((((((((((((((((((Q9FJD5_ARATH/30-146,(((Q9AUI4_PINTA/36-152,(Q9AUI1_PINTA/41-156,Q9AUI6_PINTA/39-155)),((Q9ZQW2_POPTR/41-157,O24042_LIRTU/42-158),O24041_LIRTU/32-148)),O81081_ARATH/35-151)),Q9AUI0_PINTA/32-148),(Q8RYM9_ORYSA/34-150,Q8VZA1_ARATH/31-147)),(O49232_ORYSA/8-124,Q8H6A0_LOLPR/37-153)),(Q9ZQW3_POPTR/30-146,(O80434_ARATH/32-148,Q9LFB7_ARATH/30-146))),Q8S2A8_ORYSA/35-151),(Q9ZPY2_ARATH/37-153,Q9LM34_ARATH/29-145)),((((Q38757_ACEPS/31-147,Q94ID0_RHUVE/9-125),Q84J37_ARATH/27-143),Q9FY79_ARATH/41-157),(O22917_ARATH/33-149,(((Q8L4Y3_SOYBN/42-158,Q9SIY8_ARATH/34-150),Q941X2_ORYSA/32-148),Q9AUI3_PINTA/36-152)))),((Q9SR40_ARATH/31-147,(Q8W0V5_LOLPR/30-146,Q9LFD1_ARATH/33-149)),Q8W0V4_LOLPR/45-161)),O42702_9ASCO/36-154),((O04947_ARATH/22-139,(O24093_MEDTR/31-148,Q9M5B5_CUCME/45-162)),Q9SDV9_BRAJU/30-147)),(((((Q7XIF0_ORYSA/35-152,(Q8LFM3_ARATH/42-158,O23170_ARATH/36-152)),(Q7XSQ1_ORYSA/36-152,(((O04870_LYCES/10-126,Q9SFF1_ARATH/34-150),O65449_ARATH/31-147),Q9SUD0_ARATH/33-149))),(Q9SMW3_ARATH/31-147,NTP3_TOBAC/31-147)),(Q8L8N6_ARATH/32-148,Q942J6_ORYSA/33-149)),(((Q8L3Q4_ORYSA/49-161,Q9LV68_ARATH/34-150),(SKS1_ARATH/34-150,(Q84ZL7_ORYSA/38-154,Q9LX04_ORYSA/32-148))),SKU5_ARATH/30-146))),(((Q96VT5_EMENI/39-149,Q9UVW1_ASPFU/25-141),LAC1_EMENI/28-145),((((Q9VBK7_DROME/139-256,Q9VX11_DROME/122-239),((Q8IME6_DROME/220-337,(Q7Q896_ANOGA/40-158,Q7Q898_ANOGA/12-130)),(Q9VLC3_DROME/283-401,Q8I8Y1_MANSE/186-304))),(Q19687_CAEEL/70-188,Q7PNZ9_ANOGA/84-196)),((Q875H3_PHACH/52-169,((YAK8_SCHPO/30-151,Q9UVV2_ASPFU/26-143),((Q8NK87_CANAL/29-147,FET3_CANGA/25-144),(Q8X010_NEUCR/27-145,Q9P861_ARXAD/25-143)))),(Q7SDL8_NEUCR/27-146,(((((Q7S4C0_NEUCR/76-193,Q8TFE1_GAEGR/83-200),Q96WM9_BOTCI/74-191),(Q8TFD9_GAEGR/75-195,Q96WN0_BOTCI/68-185)),(((Q9C497_GLOLA/74-192,(((LAC1_CRYPA/73-193,LAC2_PODAN/85-205),LAC1_NEUCR/91-211),(Q8TFE2_9PEZI/64-183,Q7S6W1_NEUCR/76-195))),Q7S1M8_NEUCR/27-114),Q7S9Z8_NEUCR/154-264)),Q00292_ASPTE/65-183)))))),(((Q9A9L6_CAUCR/56-170,Q82XJ1_NITEU/53-167),(Q9L914_9GAMM/58-175,((Q8XS25_RALSO/63-177,((Q8PCX4_XANCP/56-171,Q87F38_XYLFT/61-176),((Q9R9E7_PSESX/50-164,COPA2_PSESM/50-164),PCOA_ECOLI/50-164))),Q7W3D4_BORPA/52-166))),(Q8RNQ3_LEGPN/119-233,Q7QM72_ANOGA/5-120))),Q8U8U7_AGRT5/76-193),((Q9X3V2_PSEPU/46-162,Q989B7_RHILO/43-161),Q7MGM1_VIBVY/42-159)),((Q7NRY4_CHRVO/82-200,(Q98FW8_RHILO/79-198,Q9CJQ6_PASMU/79-197)),Q9PME8_CAMJE/88-206)),((Q8RQE2_9LACT/61-172,Q8ZWA8_PYRAE/48-158),((Q88ZG5_LACPL/57-175,Q8CQF6_STAEP/88-203),(((CUEO_YERPE/53-168,Q7N890_PHOLL/51-168),(CUEO_ECOLI/51-167,CUEO_SALTI/53-167)),(((SUFI_ECOLI/51-168,(Q7N0E3_PHOLL/52-169,Q8ZI41_YERPE/52-169)),(Q7VPL4_HAEDU/53-170,(SUFI_HAEIN/51-168,Q9CPE1_PASMU/54-168))),(Q8YCF0_BRUME/28-145,Q82JK0_STRAW/63-180)))))),(Q8RMC6_9ACTO/88-204,Q93M03_STRAU/64-181)),BLRO_MYRVE/82-198),Q9P8C3_9HYPO/104-220,Q7RX46_NEUCR/74-190);
(((((((((((((((((((((Q9FJD5_ARATH/30-146:0.14913,(((Q9AUI4_PINTA/36-152:0.13002,(Q9AUI1_PINTA/41-156:0.12736,Q9AUI6_PINTA/39-155:0.11423):0.04852):0.07992,((Q9ZQW2_POPTR/41-157:0.18566,O24042_LIRTU/42-158:0.06190):0.01545,O24041_LIRTU/32-148:0.21410):0.05303):0.00923,O81081_ARATH/35-151:0.19220):0.02722):0.05731,Q9AUI0_PINTA/32-148:0.17771):0.02879,(Q8RYM9_ORYSA/34-150:0.19904,Q8VZA1_ARATH/31-147:0.09072):0.13624):0.00588,(O49232_ORYSA/8-124:0.11476,Q8H6A0_LOLPR/37-153:0.12184):0.09266):0.02436,(Q9ZQW3_POPTR/30-146:0.26373,(O80434_ARATH/32-148:0.10938,Q9LFB7_ARATH/30-146:0.13883):0.04858):0.05204):0.05264,Q8S2A8_ORYSA/35-151:0.11781):0.15048,(Q9ZPY2_ARATH/37-153:0.32968,Q9LM34_ARATH/29-145:0.29542):0.07413):0.08384,((((Q38757_ACEPS/31-147:0.17397,Q94ID0_RHUVE/9-125:0.12968):0.14390,Q84J37_ARATH/27-143:0.26893):0.16374,Q9FY79_ARATH/41-157:0.25063):0.21797,(O22917_ARATH/33-149:0.17815,(((Q8L4Y3_SOYBN/42-158:0.09850,Q9SIY8_ARATH/34-150:0.14185):0.05299,Q941X2_ORYSA/32-148:0.12856):0.03599,Q9AUI3_PINTA/36-152:0.13232):0.07918):0.06249):0.08113):0.05940,((Q9SR40_ARATH/31-147:0.13983,(Q8W0V5_LOLPR/30-146:0.35573,Q9LFD1_ARATH/33-149:0.21951):0.13635):0.14479,Q8W0V4_LOLPR/45-161:0.19514):0.07244):0.31871,O42702_9ASCO/36-154:0.92944):0.06600,((O04947_ARATH/22-139:0.10918,(O24093_MEDTR/31-148:0.13411,Q9M5B5_CUCME/45-162:0.15475):0.14522):0.09338,Q9SDV9_BRAJU/30-147:0.12902):0.36360):0.05366,(((((Q7XIF0_ORYSA/35-152:0.06528,(Q8LFM3_ARATH/42-158:0.09241,O23170_ARATH/36-152:0.20607):0.11988):0.10043,(Q7XSQ1_ORYSA/36-152:0.14080,(((O04870_LYCES/10-126:0.12093,Q9SFF1_ARATH/34-150:0.12207):0.05318,O65449_ARATH/31-147:0.18427):0.03580,Q9SUD0_ARATH/33-149:0.29958):0.05885):0.08537):0.06172,(Q9SMW3_ARATH/31-147:0.21382,NTP3_TOBAC/31-147:0.09895):0.06897):0.06184,(Q8L8N6_ARATH/32-148:0.31944,Q942J6_ORYSA/33-149:0.27205):0.07245):0.08162,(((Q8L3Q4_ORYSA/49-161:0.21748,Q9LV68_ARATH/34-150:0.05161):0.08776,(SKS1_ARATH/34-150:0.13550,(Q84ZL7_ORYSA/38-154:0.12878,Q9LX04_ORYSA/32-148:0.15349):0.05883):0.02631):0.03451,SKU5_ARATH/30-146:0.13563):0.09848):0.63199):0.02094,(((Q96VT5_EMENI/39-149:0.50929,Q9UVW1_ASPFU/25-141:0.21990):0.10424,LAC1_EMENI/28-145:0.38746):0.34381,((((Q9VBK7_DROME/139-256:0.38050,Q9VX11_DROME/122-239:0.40348):0.16772,((Q8IME6_DROME/220-337:0.34664,(Q7Q896_ANOGA/40-158:0.24591,Q7Q898_ANOGA/12-130:0.18848):0.23399):0.10848,(Q9VLC3_DROME/283-401:0.22057,Q8I8Y1_MANSE/186-304:0.24104):0.12062):0.09594):0.04479,(Q19687_CAEEL/70-188:0.83303,Q7PNZ9_ANOGA/84-196:0.60217):0.15967):0.26573,((Q875H3_PHACH/52-169:0.58282,((YAK8_SCHPO/30-151:0.58537,Q9UVV2_ASPFU/26-143:0.41488):0.09653,((Q8NK87_CANAL/29-147:0.16382,FET3_CANGA/25-144:0.33193):0.33107,(Q8X010_NEUCR/27-145:0.17332,Q9P861_ARXAD/25-143:0.27462):0.04572):0.10572):0.27264):0.11266,(Q7SDL8_NEUCR/27-146:0.50585,(((((Q7S4C0_NEUCR/76-193:0.21416,Q8TFE1_GAEGR/83-200:0.17709):0.14402,Q96WM9_BOTCI/74-191:0.06081):0.04041,(Q8TFD9_GAEGR/75-195:0.52783,Q96WN0_BOTCI/68-185:0.18233):0.12735):0.17091,(((Q9C497_GLOLA/74-192:0.20470,(((LAC1_CRYPA/73-193:0.23203,LAC2_PODAN/85-205:0.16337):0.05565,LAC1_NEUCR/91-211:0.10274):0.08710,(Q8TFE2_9PEZI/64-183:0.22630,Q7S6W1_NEUCR/76-195:0.27454):0.09106):0.15928):0.08439,Q7S1M8_NEUCR/27-114:0.44278):0.18874,Q7S9Z8_NEUCR/154-264:0.37250):0.10586):0.08796,Q00292_ASPTE/65-183:0.23346):0.10792):0.17074):0.20202):0.05299):0.05339):0.26301,(((Q9A9L6_CAUCR/56-170:0.22881,Q82XJ1_NITEU/53-167:0.32504):0.14502,(Q9L914_9GAMM/58-175:0.31365,((Q8XS25_RALSO/63-177:0.15906,((Q8PCX4_XANCP/56-171:0.15866,Q87F38_XYLFT/61-176:0.16427):0.15940,((Q9R9E7_PSESX/50-164:0.19840,COPA2_PSESM/50-164:0.05934):0.05356,PCOA_ECOLI/50-164:0.16186):0.13723):0.07737):0.05546,Q7W3D4_BORPA/52-166:0.11883):0.05253):0.04152):0.18204,(Q8RNQ3_LEGPN/119-233:0.33137,Q7QM72_ANOGA/5-120:0.51864):0.03957):0.14390):0.32612,Q8U8U7_AGRT5/76-193:0.54962):0.10918,((Q9X3V2_PSEPU/46-162:0.48034,Q989B7_RHILO/43-161:0.73979):0.17314,Q7MGM1_VIBVY/42-159:0.21609):0.19851):0.26892,((Q7NRY4_CHRVO/82-200:0.37432,(Q98FW8_RHILO/79-198:0.38995,Q9CJQ6_PASMU/79-197:0.32387):0.02438):0.10667,Q9PME8_CAMJE/88-206:0.40251):0.19284):0.07849,((Q8RQE2_9LACT/61-172:1.33811,Q8ZWA8_PYRAE/48-158:0.78291):0.04941,((Q88ZG5_LACPL/57-175:0.64788,Q8CQF6_STAEP/88-203:0.50002):0.05984,(((CUEO_YERPE/53-168:0.24882,Q7N890_PHOLL/51-168:0.25832):0.04146,(CUEO_ECOLI/51-167:0.08976,CUEO_SALTI/53-167:0.15050):0.13834):0.25296,(((SUFI_ECOLI/51-168:0.13483,(Q7N0E3_PHOLL/52-169:0.15852,Q8ZI41_YERPE/52-169:0.10366):0.07825):0.29202,(Q7VPL4_HAEDU/53-170:0.52227,(SUFI_HAEIN/51-168:0.21008,Q9CPE1_PASMU/54-168:0.14012):0.15654):0.18403):0.50273,(Q8YCF0_BRUME/28-145:0.49959,Q82JK0_STRAW/63-180:0.52823):0.10656):0.08369):0.13846):0.11399):0.18165):0.46018,(Q8RMC6_9ACTO/88-204:0.47001,Q93M03_STRAU/64-181:0.23283):0.10823):0.76127,BLRO_MYRVE/82-198:0.05785):0.14920,Q9P8C3_9HYPO/104-220:0.22735,Q7RX46_NEUCR/74-190:0.16737);