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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07732 phylogeny
for nucleotide alignment


 
((((((((((((((((((((((((((Q9ZQW3_POPTR/30-146,(O80434_ARATH/32-148,Q9LFB7_ARATH/30-146)),((O81081_ARATH/35-151,(((O24041_LIRTU/32-148,O24042_LIRTU/42-158),Q9ZQW2_POPTR/41-157),Q9FJD5_ARATH/30-146)),((Q9AUI4_PINTA/36-152,Q9AUI1_PINTA/41-156),Q9AUI6_PINTA/39-155))),Q9AUI0_PINTA/32-148),((Q8RYM9_ORYSA/34-150,(Q8S2A8_ORYSA/35-151,(O49232_ORYSA/8-124,Q8H6A0_LOLPR/37-153))),Q8VZA1_ARATH/31-147)),(Q9ZPY2_ARATH/37-153,Q9LM34_ARATH/29-145)),((Q9SR40_ARATH/31-147,Q9LFD1_ARATH/33-149),((Q8W0V4_LOLPR/45-161,Q8W0V5_LOLPR/30-146),Q941X2_ORYSA/32-148))),((((Q38757_ACEPS/31-147,Q94ID0_RHUVE/9-125),Q84J37_ARATH/27-143),Q9FY79_ARATH/41-157),((Q9AUI3_PINTA/36-152,(Q8L4Y3_SOYBN/42-158,Q9SIY8_ARATH/34-150)),O22917_ARATH/33-149))),((O04947_ARATH/22-139,Q9SDV9_BRAJU/30-147),(O24093_MEDTR/31-148,Q9M5B5_CUCME/45-162))),Q875H3_PHACH/52-169),(Q942J6_ORYSA/33-149,(((Q7XIF0_ORYSA/35-152,Q7XSQ1_ORYSA/36-152),((((Q8L8N6_ARATH/32-148,((Q9LV68_ARATH/34-150,SKU5_ARATH/30-146),SKS1_ARATH/34-150)),((Q9SUD0_ARATH/33-149,(O04870_LYCES/10-126,Q9SFF1_ARATH/34-150)),O65449_ARATH/31-147)),(O23170_ARATH/36-152,Q8LFM3_ARATH/42-158)),(Q9SMW3_ARATH/31-147,NTP3_TOBAC/31-147))),(Q8L3Q4_ORYSA/49-161,(Q84ZL7_ORYSA/38-154,Q9LX04_ORYSA/32-148))))),(LAC1_EMENI/28-145,(Q9UVW1_ASPFU/25-141,Q96VT5_EMENI/39-149))),(Q00292_ASPTE/65-183,((Q7SDL8_NEUCR/27-146,((Q8TFD9_GAEGR/75-195,(((LAC1_NEUCR/91-211,((Q7S1M8_NEUCR/27-114,LAC1_CRYPA/73-193),LAC2_PODAN/85-205)),(Q8TFE2_9PEZI/64-183,Q7S6W1_NEUCR/76-195)),Q9C497_GLOLA/74-192)),Q7S9Z8_NEUCR/154-264)),(Q96WN0_BOTCI/68-185,((Q7S4C0_NEUCR/76-193,Q8TFE1_GAEGR/83-200),Q96WM9_BOTCI/74-191))))),(((((Q8NK87_CANAL/29-147,FET3_CANGA/25-144),Q9P861_ARXAD/25-143),Q8X010_NEUCR/27-145),Q9UVV2_ASPFU/26-143),YAK8_SCHPO/30-151)),(O42702_9ASCO/36-154,((((Q7Q896_ANOGA/40-158,Q7Q898_ANOGA/12-130),(Q9VLC3_DROME/283-401,Q8I8Y1_MANSE/186-304)),(Q8IME6_DROME/220-337,(Q9VBK7_DROME/139-256,Q9VX11_DROME/122-239))),(Q7PNZ9_ANOGA/84-196,Q19687_CAEEL/70-188)))),(((((Q87F38_XYLFT/61-176,((((Q9R9E7_PSESX/50-164,PCOA_ECOLI/50-164),COPA2_PSESM/50-164),Q8PCX4_XANCP/56-171),((Q8XS25_RALSO/63-177,Q7W3D4_BORPA/52-166),Q9A9L6_CAUCR/56-170))),Q82XJ1_NITEU/53-167),Q9L914_9GAMM/58-175),(Q8RNQ3_LEGPN/119-233,Q7QM72_ANOGA/5-120)),Q8RQE2_9LACT/61-172)),Q8U8U7_AGRT5/76-193),((Q9X3V2_PSEPU/46-162,Q989B7_RHILO/43-161),Q7MGM1_VIBVY/42-159)),((((Q8RMC6_9ACTO/88-204,Q93M03_STRAU/64-181),((BLRO_MYRVE/82-198,Q7RX46_NEUCR/74-190),Q9P8C3_9HYPO/104-220)),Q82JK0_STRAW/63-180),(Q98FW8_RHILO/79-198,Q7NRY4_CHRVO/82-200))),Q8ZWA8_PYRAE/48-158),(Q9CJQ6_PASMU/79-197,Q9PME8_CAMJE/88-206)),Q88ZG5_LACPL/57-175),Q8CQF6_STAEP/88-203),(Q8YCF0_BRUME/28-145,((CUEO_ECOLI/51-167,CUEO_SALTI/53-167),(Q7N890_PHOLL/51-168,CUEO_YERPE/53-168)))),(SUFI_ECOLI/51-168,(Q7N0E3_PHOLL/52-169,Q8ZI41_YERPE/52-169))),Q7VPL4_HAEDU/53-170),SUFI_HAEIN/51-168,Q9CPE1_PASMU/54-168);
((((((((((((((((((((((((((Q9ZQW3_POPTR/30-146:0.32115,(O80434_ARATH/32-148:0.14025,Q9LFB7_ARATH/30-146:0.17496):0.07348):0.06527,((O81081_ARATH/35-151:0.22764,(((O24041_LIRTU/32-148:0.17611,O24042_LIRTU/42-158:0.09604):0.09835,Q9ZQW2_POPTR/41-157:0.21505):0.07102,Q9FJD5_ARATH/30-146:0.15716):0.04503):0.06789,((Q9AUI4_PINTA/36-152:0.21496,Q9AUI1_PINTA/41-156:0.11912):0.07459,Q9AUI6_PINTA/39-155:0.13340):0.08747):0.07769):0.02869,Q9AUI0_PINTA/32-148:0.23660):0.05824,((Q8RYM9_ORYSA/34-150:0.17862,(Q8S2A8_ORYSA/35-151:0.07642,(O49232_ORYSA/8-124:0.05936,Q8H6A0_LOLPR/37-153:0.08327):0.04402):0.05930):0.12703,Q8VZA1_ARATH/31-147:0.18156):0.04387):0.08607,(Q9ZPY2_ARATH/37-153:0.32830,Q9LM34_ARATH/29-145:0.25209):0.09336):0.06847,((Q9SR40_ARATH/31-147:0.19385,Q9LFD1_ARATH/33-149:0.27816):0.12345,((Q8W0V4_LOLPR/45-161:0.15971,Q8W0V5_LOLPR/30-146:0.29095):0.10784,Q941X2_ORYSA/32-148:0.14572):0.13314):0.05848):0.05481,((((Q38757_ACEPS/31-147:0.09007,Q94ID0_RHUVE/9-125:0.17182):0.09920,Q84J37_ARATH/27-143:0.26603):0.14422,Q9FY79_ARATH/41-157:0.24606):0.11118,((Q9AUI3_PINTA/36-152:0.22481,(Q8L4Y3_SOYBN/42-158:0.19634,Q9SIY8_ARATH/34-150:0.17751):0.05489):0.05391,O22917_ARATH/33-149:0.18174):0.05349):0.05840):0.21426,((O04947_ARATH/22-139:0.12038,Q9SDV9_BRAJU/30-147:0.13547):0.08684,(O24093_MEDTR/31-148:0.18883,Q9M5B5_CUCME/45-162:0.16112):0.08263):0.26150):0.07528,Q875H3_PHACH/52-169:0.48424):0.10466,(Q942J6_ORYSA/33-149:0.19231,(((Q7XIF0_ORYSA/35-152:0.12484,Q7XSQ1_ORYSA/36-152:0.19164):0.05055,((((Q8L8N6_ARATH/32-148:0.35655,((Q9LV68_ARATH/34-150:0.15572,SKU5_ARATH/30-146:0.15828):0.08645,SKS1_ARATH/34-150:0.17614):0.05237):0.08478,((Q9SUD0_ARATH/33-149:0.22910,(O04870_LYCES/10-126:0.19897,Q9SFF1_ARATH/34-150:0.18993):0.03879):0.04060,O65449_ARATH/31-147:0.15451):0.07189):0.05440,(O23170_ARATH/36-152:0.20546,Q8LFM3_ARATH/42-158:0.09013):0.08351):0.04263,(Q9SMW3_ARATH/31-147:0.19475,NTP3_TOBAC/31-147:0.18280):0.05386):0.12102):0.05972,(Q8L3Q4_ORYSA/49-161:0.12794,(Q84ZL7_ORYSA/38-154:0.14715,Q9LX04_ORYSA/32-148:0.18238):0.06440):0.07630):0.04078):0.35086):0.04231,(LAC1_EMENI/28-145:0.36821,(Q9UVW1_ASPFU/25-141:0.21435,Q96VT5_EMENI/39-149:0.32599):0.11903):0.23353):0.03681,(Q00292_ASPTE/65-183:0.34229,((Q7SDL8_NEUCR/27-146:0.35087,((Q8TFD9_GAEGR/75-195:0.34247,(((LAC1_NEUCR/91-211:0.15965,((Q7S1M8_NEUCR/27-114:0.37329,LAC1_CRYPA/73-193:0.20604):0.08363,LAC2_PODAN/85-205:0.15642):0.06220):0.02388,(Q8TFE2_9PEZI/64-183:0.18570,Q7S6W1_NEUCR/76-195:0.30061):0.09296):0.13554,Q9C497_GLOLA/74-192:0.19560):0.08481):0.11878,Q7S9Z8_NEUCR/154-264:0.29341):0.05653):0.02927,(Q96WN0_BOTCI/68-185:0.27570,((Q7S4C0_NEUCR/76-193:0.24224,Q8TFE1_GAEGR/83-200:0.18790):0.12105,Q96WM9_BOTCI/74-191:0.14454):0.05408):0.10781):0.06090):0.09911):0.06949,(((((Q8NK87_CANAL/29-147:0.23819,FET3_CANGA/25-144:0.31550):0.17270,Q9P861_ARXAD/25-143:0.20498):0.12418,Q8X010_NEUCR/27-145:0.19799):0.07509,Q9UVV2_ASPFU/26-143:0.39099):0.12064,YAK8_SCHPO/30-151:0.42597):0.14577):0.02989,(O42702_9ASCO/36-154:0.63650,((((Q7Q896_ANOGA/40-158:0.23404,Q7Q898_ANOGA/12-130:0.16252):0.20269,(Q9VLC3_DROME/283-401:0.22937,Q8I8Y1_MANSE/186-304:0.22427):0.11357):0.03436,(Q8IME6_DROME/220-337:0.39133,(Q9VBK7_DROME/139-256:0.32473,Q9VX11_DROME/122-239:0.31097):0.12985):0.06659):0.07984,(Q7PNZ9_ANOGA/84-196:0.49027,Q19687_CAEEL/70-188:0.71487):0.04441):0.08946):0.14120):0.11739,(((((Q87F38_XYLFT/61-176:0.28448,((((Q9R9E7_PSESX/50-164:0.19125,PCOA_ECOLI/50-164:0.22505):0.07496,COPA2_PSESM/50-164:0.11710):0.12362,Q8PCX4_XANCP/56-171:0.19637):0.03036,((Q8XS25_RALSO/63-177:0.12891,Q7W3D4_BORPA/52-166:0.12304):0.04381,Q9A9L6_CAUCR/56-170:0.25891):0.05146):0.07996):0.07918,Q82XJ1_NITEU/53-167:0.25498):0.11589,Q9L914_9GAMM/58-175:0.26374):0.10726,(Q8RNQ3_LEGPN/119-233:0.32341,Q7QM72_ANOGA/5-120:0.44023):0.10278):0.06465,Q8RQE2_9LACT/61-172:0.82667):0.12121):0.18469,Q8U8U7_AGRT5/76-193:0.35171):0.10163,((Q9X3V2_PSEPU/46-162:0.34864,Q989B7_RHILO/43-161:0.35813):0.11605,Q7MGM1_VIBVY/42-159:0.41007):0.10739):0.09234,((((Q8RMC6_9ACTO/88-204:0.24334,Q93M03_STRAU/64-181:0.21535):0.10508,((BLRO_MYRVE/82-198:0.20929,Q7RX46_NEUCR/74-190:0.27772):0.09584,Q9P8C3_9HYPO/104-220:0.14107):0.37793):0.17387,Q82JK0_STRAW/63-180:0.38064):0.09180,(Q98FW8_RHILO/79-198:0.26362,Q7NRY4_CHRVO/82-200:0.29019):0.07627):0.05435):0.19657,Q8ZWA8_PYRAE/48-158:0.58388):0.13944,(Q9CJQ6_PASMU/79-197:0.27061,Q9PME8_CAMJE/88-206:0.28300):0.10824):0.12162,Q88ZG5_LACPL/57-175:0.43789):0.08879,Q8CQF6_STAEP/88-203:0.42025):0.08026,(Q8YCF0_BRUME/28-145:0.51697,((CUEO_ECOLI/51-167:0.14527,CUEO_SALTI/53-167:0.15189):0.07148,(Q7N890_PHOLL/51-168:0.21116,CUEO_YERPE/53-168:0.26712):0.08558):0.11588):0.15974):0.24405,(SUFI_ECOLI/51-168:0.18288,(Q7N0E3_PHOLL/52-169:0.24750,Q8ZI41_YERPE/52-169:0.16282):0.07617):0.24310):0.10971,Q7VPL4_HAEDU/53-170:0.43101):0.08134,SUFI_HAEIN/51-168:0.25325,Q9CPE1_PASMU/54-168:0.18908);