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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07731 phylogeny
for nucleotide alignment


 
((((((((((((((((((Q96VT5_EMENI/456-583,Q9UVW1_ASPFU/433-575),((Q8W0V5_LOLPR/411-556,Q94HD6_ORYSA/400-531),((Q9LM34_ARATH/424-560,Q8RYM9_ORYSA/411-546),((((((Q9LFD1_ARATH/411-552,Q9SR40_ARATH/412-551),Q84SA8_ASTTR/257-395),Q9AUI3_PINTA/418-554),((Q9ZPY2_ARATH/417-553,((Q9FSC9_POPTR/404-539,Q9ZQW5_POPTR/254-388),(Q9AUI1_PINTA/428-562,(O81081_ARATH/423-557,O24041_LIRTU/420-554)))),((Q9FI28_ARATH/333-472,Q94ID0_RHUVE/389-516),Q9FY79_ARATH/420-553))),O22917_ARATH/419-554),Q941X2_ORYSA/415-551)))),((Q8I8Y1_MANSE/570-726,(Q9VBK7_DROME/508-666,Q9VX11_DROME/473-628)),((Q7Q5V8_ANOGA/460-618,Q8I8Y0_MANSE/577-738),Q8IME6_DROME/675-833))),((Q875H3_PHACH/405-542,((Q7SDL8_NEUCR/387-512,Q96V70_FUSPR/302-411),((Q00292_ASPTE/424-564,(Q7S2V2_NEUCR/516-661,Q7S9Z8_NEUCR/523-687)),(((Q7S4C0_NEUCR/418-552,Q96WM9_BOTCI/413-547),((((Q7S6W1_NEUCR/438-571,(Q7S1M8_NEUCR/347-488,Q7RYF6_NEUCR/414-556)),Q8TFE2_9PEZI/409-548),(LAC1_NEUCR/427-569,LAC2_PODAN/426-569)),Q9C497_GLOLA/416-556)),(Q8TFD9_GAEGR/415-543,Q96UP8_FUSPR/312-437))))),((((Q8J0L7_CLAPU/359-497,Q8X010_NEUCR/358-513),(Q7S065_NEUCR/351-484,Q9UVV2_ASPFU/370-504)),(((FET5_YEAST/367-517,((Q9C1Z1_PICPA/345-485,FET3_YEAST/362-504),((FET3_CANAL/362-502,Q8NK87_CANAL/361-501),FET3_CANGA/362-504))),Q9P861_ARXAD/361-500),YAK8_SCHPO/364-501)),(LAC4_THACU/380-502,((LAC1_AGABI/371-491,Q96TR4_PLEOS/372-492),(Q875H1_COPCO/371-497,(((O74171_SCHCO/363-488,Q9Y781_COPCI/368-493),((O60199_PLEOS/365-491,Q7Z8S2_PLESA/371-496),(Q8X1W2_LENED/396-521,(Q8WZH9_LENED/381-493,Q9UVT5_LENED/376-499)))),(Q9P8G4_9APHY/369-494,(O13420_9APHY/364-493,((O59944_CERSU/368-493,Q8NID5_9APHY/368-496),LAC4_TRAVI/366-494)))))))))),(Q942J6_ORYSA/381-524,(((((Q9LX04_ORYSA/396-535,((SKS1_ARATH/397-536,SKU5_ARATH/394-533),Q9LV68_ARATH/382-521)),Q84ZL7_ORYSA/403-540),((O23170_ARATH/380-520,(Q7XIF0_ORYSA/383-523,Q9FKY9_ARATH/382-522)),Q9LQT5_ARATH/347-487)),(O65449_ARATH/375-516,((Q8VYB3_ARATH/384-525,O04870_LYCES/354-493),Q9SFF1_ARATH/376-516))),(NTP3_TOBAC/383-524,Q9ZVV3_ARATH/388-531)))),Q93HV5_STRGR/170-308),Q9NKK0_LEIMA/403-552),Q89KF9_BRAJA/312-434),(((Q804X3_CHICK/941-1065,Q90ZT2_BRARE/489-613),((Q7NG83_GLOVI/190-322,Q8YQ92_ANASP/200-332),((Q8RNQ3_LEGPN/688-807,((((Q7W3D4_BORPA/466-585,(COPA1_PSESM/489-608,Q87F38_XYLFT/490-609)),Q8XS25_RALSO/486-605),Q82XJ1_NITEU/485-608),Q9A9L6_CAUCR/444-566)),(Q8GP36_CORDI/379-493,((O53858_MYCTU/384-503,O68054_RHOCA/369-490),((Q7X4G1_XANCV/217-341,Q8U8U7_AGRT5/212-336),Q89T40_BRAJA/212-336)))))),(Q7MGM1_VIBVY/340-461,Q93F47_9PSED/243-350))),Q8GB87_STRLA/454-610),((COTA_BACSU/354-512,Q8CXJ7_OCEIH/350-508),O67206_AQUAE/387-526)),(Q82JK0_STRAW/341-480,(Q7RX46_NEUCR/362-505,(BLRO_MYRVE/371-515,Q9P8C3_9HYPO/394-542)))),Q8XX19_RALSO/116-246),Q8FQU9_COREF/414-557),(Q9X8C0_STRCO/91-236,(Q7NRY4_CHRVO/360-497,Q9CJQ6_PASMU/378-515))),(Q8YCF0_BRUME/358-494,(Q7N890_PHOLL/374-513,CUEO_YERPE/393-532))),SUFI_SALTY/333-470),Q7N0E3_PHOLL/334-472,Q8ZI41_YERPE/334-472);
((((((((((((((((((Q96VT5_EMENI/456-583:0.26359,Q9UVW1_ASPFU/433-575:0.46536):0.33580,((Q8W0V5_LOLPR/411-556:0.17754,Q94HD6_ORYSA/400-531:0.32892):0.18743,((Q9LM34_ARATH/424-560:0.39808,Q8RYM9_ORYSA/411-546:0.12388):0.10752,((((((Q9LFD1_ARATH/411-552:0.23168,Q9SR40_ARATH/412-551:0.18633):0.09882,Q84SA8_ASTTR/257-395:0.20219):0.10790,Q9AUI3_PINTA/418-554:0.27509):0.05161,((Q9ZPY2_ARATH/417-553:0.38721,((Q9FSC9_POPTR/404-539:0.13086,Q9ZQW5_POPTR/254-388:0.15807):0.11299,(Q9AUI1_PINTA/428-562:0.17508,(O81081_ARATH/423-557:0.22691,O24041_LIRTU/420-554:0.19593):0.14197):0.05909):0.09461):0.05820,((Q9FI28_ARATH/333-472:0.29753,Q94ID0_RHUVE/389-516:0.27257):0.09839,Q9FY79_ARATH/420-553:0.26768):0.12015):0.08471):0.08607,O22917_ARATH/419-554:0.17095):0.19025,Q941X2_ORYSA/415-551:0.13622):0.06763):0.09208):0.15071):0.07200,((Q8I8Y1_MANSE/570-726:0.40214,(Q9VBK7_DROME/508-666:0.47955,Q9VX11_DROME/473-628:0.33226):0.22920):0.07674,((Q7Q5V8_ANOGA/460-618:0.13478,Q8I8Y0_MANSE/577-738:0.20944):0.06935,Q8IME6_DROME/675-833:0.27222):0.26116):0.26735):0.07337,((Q875H3_PHACH/405-542:0.53140,((Q7SDL8_NEUCR/387-512:0.34163,Q96V70_FUSPR/302-411:0.32409):0.28582,((Q00292_ASPTE/424-564:0.45951,(Q7S2V2_NEUCR/516-661:0.36693,Q7S9Z8_NEUCR/523-687:0.36839):0.09759):0.06015,(((Q7S4C0_NEUCR/418-552:0.15141,Q96WM9_BOTCI/413-547:0.36059):0.17062,((((Q7S6W1_NEUCR/438-571:0.32249,(Q7S1M8_NEUCR/347-488:0.38123,Q7RYF6_NEUCR/414-556:0.21660):0.08664):0.03644,Q8TFE2_9PEZI/409-548:0.17480):0.05974,(LAC1_NEUCR/427-569:0.17879,LAC2_PODAN/426-569:0.21487):0.07272):0.06508,Q9C497_GLOLA/416-556:0.27115):0.10987):0.04045,(Q8TFD9_GAEGR/415-543:0.22052,Q96UP8_FUSPR/312-437:0.49331):0.06193):0.07570):0.05660):0.04906):0.09666,((((Q8J0L7_CLAPU/359-497:0.16608,Q8X010_NEUCR/358-513:0.23105):0.09490,(Q7S065_NEUCR/351-484:0.28658,Q9UVV2_ASPFU/370-504:0.41326):0.06900):0.02974,(((FET5_YEAST/367-517:0.31656,((Q9C1Z1_PICPA/345-485:0.23027,FET3_YEAST/362-504:0.16858):0.04532,((FET3_CANAL/362-502:0.14514,Q8NK87_CANAL/361-501:0.12758):0.12339,FET3_CANGA/362-504:0.17713):0.04587):0.09929):0.15811,Q9P861_ARXAD/361-500:0.19613):0.11619,YAK8_SCHPO/364-501:0.42395):0.12834):0.14225,(LAC4_THACU/380-502:0.52190,((LAC1_AGABI/371-491:0.15991,Q96TR4_PLEOS/372-492:0.21630):0.16846,(Q875H1_COPCO/371-497:0.36472,(((O74171_SCHCO/363-488:0.21515,Q9Y781_COPCI/368-493:0.25056):0.04232,((O60199_PLEOS/365-491:0.26216,Q7Z8S2_PLESA/371-496:0.21352):0.04266,(Q8X1W2_LENED/396-521:0.23564,(Q8WZH9_LENED/381-493:0.03908,Q9UVT5_LENED/376-499:0.09429):0.16887):0.20640):0.06979):0.05267,(Q9P8G4_9APHY/369-494:0.18586,(O13420_9APHY/364-493:0.15901,((O59944_CERSU/368-493:0.17869,Q8NID5_9APHY/368-496:0.09725):0.03998,LAC4_TRAVI/366-494:0.15357):0.07096):0.07500):0.05706):0.03972):0.09445):0.11733):0.21860):0.06442):0.04607):0.06550,(Q942J6_ORYSA/381-524:0.13771,(((((Q9LX04_ORYSA/396-535:0.19130,((SKS1_ARATH/397-536:0.23779,SKU5_ARATH/394-533:0.22337):0.05581,Q9LV68_ARATH/382-521:0.21070):0.03969):0.04925,Q84ZL7_ORYSA/403-540:0.22336):0.23371,((O23170_ARATH/380-520:0.28803,(Q7XIF0_ORYSA/383-523:0.33234,Q9FKY9_ARATH/382-522:0.23964):0.08355):0.07003,Q9LQT5_ARATH/347-487:0.35126):0.07334):0.06880,(O65449_ARATH/375-516:0.16685,((Q8VYB3_ARATH/384-525:0.23497,O04870_LYCES/354-493:0.16165):0.08048,Q9SFF1_ARATH/376-516:0.19289):0.07493):0.10824):0.26236,(NTP3_TOBAC/383-524:0.21558,Q9ZVV3_ARATH/388-531:0.16365):0.08159):0.09496):0.59888):0.07333,Q93HV5_STRGR/170-308:0.63108):0.06288,Q9NKK0_LEIMA/403-552:0.73010):0.12028,Q89KF9_BRAJA/312-434:0.69745):0.00195,(((Q804X3_CHICK/941-1065:0.43950,Q90ZT2_BRARE/489-613:0.48927):0.45737,((Q7NG83_GLOVI/190-322:0.00000,Q8YQ92_ANASP/200-332:0.48954):0.59611,((Q8RNQ3_LEGPN/688-807:0.63333,((((Q7W3D4_BORPA/466-585:0.13416,(COPA1_PSESM/489-608:0.14769,Q87F38_XYLFT/490-609:0.19099):0.14791):0.11204,Q8XS25_RALSO/486-605:0.17347):0.08461,Q82XJ1_NITEU/485-608:0.30807):0.10703,Q9A9L6_CAUCR/444-566:0.22386):0.07616):0.11563,(Q8GP36_CORDI/379-493:0.34777,((O53858_MYCTU/384-503:0.31959,O68054_RHOCA/369-490:0.43993):0.12897,((Q7X4G1_XANCV/217-341:0.21046,Q8U8U7_AGRT5/212-336:0.23450):0.10917,Q89T40_BRAJA/212-336:0.05355):0.49864):0.02338):0.04457):0.05984):0.09458):0.04375,(Q7MGM1_VIBVY/340-461:0.56829,Q93F47_9PSED/243-350:0.20255):0.44266):0.11122):0.08966,Q8GB87_STRLA/454-610:0.40261):0.08519,((COTA_BACSU/354-512:0.21154,Q8CXJ7_OCEIH/350-508:0.40660):0.43154,O67206_AQUAE/387-526:0.55339):0.17936):0.09634,(Q82JK0_STRAW/341-480:0.33837,(Q7RX46_NEUCR/362-505:0.35082,(BLRO_MYRVE/371-515:0.29749,Q9P8C3_9HYPO/394-542:0.20720):0.10759):0.37094):0.06828):0.06572,Q8XX19_RALSO/116-246:0.70002):0.09699,Q8FQU9_COREF/414-557:0.33493):0.12319,(Q9X8C0_STRCO/91-236:0.40502,(Q7NRY4_CHRVO/360-497:0.35474,Q9CJQ6_PASMU/378-515:0.55777):0.11612):0.05906):0.16395,(Q8YCF0_BRUME/358-494:0.33563,(Q7N890_PHOLL/374-513:0.20129,CUEO_YERPE/393-532:0.29457):0.38542):0.07352):0.37645,SUFI_SALTY/333-470:0.15790):0.09786,Q7N0E3_PHOLL/334-472:0.27839,Q8ZI41_YERPE/334-472:0.16400);