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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07729 phylogeny
for restricted amino acid alignment


 
(((Q8XSY6_RALSO/156-284,Q98EL7_RHILO/163-288),(((Q9FBS4_STRCO/85-210,Q9RJW6_STRCO/275-400),Q9X9Y2_STRCO/83-202),(((((Q92WG1_RHIME/103-225,Q987L0_RHILO/104-226),Q92WP5_RHIME/101-223),Q9RT60_DEIRA/106-231),((Q8NMC7_CORGL/105-231,Q8YBP1_BRUME/102-224),(((((Q930W0_RHIME/77-201,Q9RW54_DEIRA/111-233),Q9RJV3_STRCO/103-226),O88071_STRCO/105-226),(((O50536_STRCO/157-281,(Q8NMP1_CORGL/115-241,Q8NPU3_CORGL/113-239)),Q8ZKY9_SALTY/97-220),((Q92W54_RHIME/117-239,Q987E9_RHILO/119-242),(((Q986V4_RHILO/118-240,(((Q8UEG9_AGRT5/110-234,(Q92PR5_RHIME/109-233,Q92UR2_RHIME/106-230)),Q8YD25_BRUME/106-230),(Q8XAW3_ECO57/106-227,Q8ZJS6_YERPE/106-227))),(Q98K08_RHILO/129-250,Q9RJZ3_STRCO/106-230)),((Q9A8D4_CAUCR/115-237,Q9AA25_CAUCR/100-221),((Q8UB41_AGRT5/106-228,Q92MV0_RHIME/106-228),Q98LV8_RHILO/119-242)))))),(((((((Q8XFI2_SALTI/128-256,((((Q8ZGL0_YERPE/109-236,Q8ZIC9_YERPE/95-219),Q8ZM57_SALTY/111-241),(Q9A4L7_CAUCR/91-215,Q9A9J4_CAUCR/93-219)),((Q8UAW5_AGRT5/94-221,Q92WC0_RHIME/93-219),Q8UBN0_AGRT5/96-222))),Q92TP2_RHIME/95-219),(((Q8U9D4_AGRT5/100-221,Q9RFN7_RHIET/104-225),(Q96XF5_SULTO/74-198,Q97YR4_SULSO/74-197)),(Q9A510_CAUCR/104-230,((Q931B4_RHIME/135-260,Q986F7_RHILO/88-213),Q8UIM2_AGRT5/99-224)))),((Q9K840_BACHD/95-217,((Q8XNM4_CLOPE/98-223,Q97G26_CLOAB/98-223),Q97D77_CLOAB/94-215)),(((((Q8XXJ6_RALSO/100-224,Q9I3J3_PSEAE/95-218),(Q8YBS9_BRUME/90-213,Q92YH4_RHIME/85-208)),Q92WT1_RHIME/91-217),(Q9LBW6_MYCGS/59-182,Q9XDB1_MYCSM/105-226)),(Q98GE5_RHILO/89-214,(Q987M8_RHILO/84-207,Q8NLM6_CORGL/97-221))))),(((Q93JH0_STRCO/97-221,Q9S276_STRCO/95-218),Q8Y8F6_LISMO/94-217),Q8YFY9_BRUME/92-214)),((Q9HTK2_PSEAE/94-225,((((Q8XDF8_ECO57/100-224,(Q8KTI5_AZOVI/99-231,Q9HV39_PSEAE/99-230)),(Q8ZBJ0_YERPE/99-227,Q9KPF3_VIBCH/99-227)),(O33960_RHOCA/99-227,((Q8YB35_BRUME/102-230,(Q8UHL8_AGRT5/102-230,Q92RS5_RHIME/117-245)),Q987U2_RHILO/101-229))),Q9JT55_NEIMA/98-226)),(Q92WH8_RHIME/102-228,((O07007_BACSU/78-205,Q9KBT9_BACHD/78-203),(((Q8U8A7_AGRT5/101-228,Q8YDV3_BRUME/127-254),(((Q8UBW0_AGRT5/101-226,Q930R5_RHIME/99-224),Q982M5_RHILO/101-226),Q93TD5_PSEYM/96-222)),((Q8UKM5_AGRT5/94-223,(((Q8U732_AGRT5/99-225,Q8UAB3_AGRT5/99-226),(Q8UB73_AGRT5/104-232,Q92V08_RHIME/98-226)),Q92YS5_RHIME/105-233)),(Q92T71_RHIME/98-228,Q92X56_RHIME/101-231))))))),Q9RJQ8_STRCO/118-240)))),(Q9JP85_STRSO/81-203,(Q92W83_RHIME/118-247,P96570_BURCE/116-246))))),Q92TE0_RHIME/154-282,Q98GH2_RHILO/106-234);
(((Q8XSY6_RALSO/156-284:0.89200,Q98EL7_RHILO/163-288:0.75598):0.54812,(((Q9FBS4_STRCO/85-210:0.40964,Q9RJW6_STRCO/275-400:0.51278):0.56117,Q9X9Y2_STRCO/83-202:1.09824):0.04723,(((((Q92WG1_RHIME/103-225:0.11534,Q987L0_RHILO/104-226:0.25091):0.41080,Q92WP5_RHIME/101-223:0.70410):0.32109,Q9RT60_DEIRA/106-231:1.07158):0.09000,((Q8NMC7_CORGL/105-231:0.70726,Q8YBP1_BRUME/102-224:0.94101):0.60287,(((((Q930W0_RHIME/77-201:0.74909,Q9RW54_DEIRA/111-233:0.87058):0.10607,Q9RJV3_STRCO/103-226:0.80251):0.07829,O88071_STRCO/105-226:1.23357):0.23675,(((O50536_STRCO/157-281:0.87775,(Q8NMP1_CORGL/115-241:0.11681,Q8NPU3_CORGL/113-239:0.19652):0.59240):0.38177,Q8ZKY9_SALTY/97-220:0.66673):0.09780,((Q92W54_RHIME/117-239:0.68489,Q987E9_RHILO/119-242:0.57563):0.08003,(((Q986V4_RHILO/118-240:0.49036,(((Q8UEG9_AGRT5/110-234:0.50620,(Q92PR5_RHIME/109-233:0.16502,Q92UR2_RHIME/106-230:0.23223):0.12159):0.25056,Q8YD25_BRUME/106-230:0.23995):0.40928,(Q8XAW3_ECO57/106-227:0.20785,Q8ZJS6_YERPE/106-227:0.40080):0.90332):0.13285):0.05182,(Q98K08_RHILO/129-250:0.85586,Q9RJZ3_STRCO/106-230:0.57158):0.16010):0.10960,((Q9A8D4_CAUCR/115-237:0.94261,Q9AA25_CAUCR/100-221:0.57883):0.25106,((Q8UB41_AGRT5/106-228:0.22683,Q92MV0_RHIME/106-228:0.04219):0.41570,Q98LV8_RHILO/119-242:0.36911):0.59093):0.12989):0.20623):0.10733):0.14655):0.02202,(((((((Q8XFI2_SALTI/128-256:0.97923,((((Q8ZGL0_YERPE/109-236:0.43510,Q8ZIC9_YERPE/95-219:0.50273):0.13465,Q8ZM57_SALTY/111-241:0.66213):0.25304,(Q9A4L7_CAUCR/91-215:0.38296,Q9A9J4_CAUCR/93-219:0.37343):0.36771):0.07126,((Q8UAW5_AGRT5/94-221:0.33420,Q92WC0_RHIME/93-219:0.47478):0.40384,Q8UBN0_AGRT5/96-222:0.58141):0.22674):0.18140):0.13235,Q92TP2_RHIME/95-219:1.00995):0.12928,(((Q8U9D4_AGRT5/100-221:0.45341,Q9RFN7_RHIET/104-225:0.22827):0.55997,(Q96XF5_SULTO/74-198:0.20116,Q97YR4_SULSO/74-197:0.32867):0.64376):0.09180,(Q9A510_CAUCR/104-230:0.99993,((Q931B4_RHIME/135-260:0.32047,Q986F7_RHILO/88-213:0.39346):0.03549,Q8UIM2_AGRT5/99-224:0.29664):0.51020):0.26874):0.15145):0.01704,((Q9K840_BACHD/95-217:0.84528,((Q8XNM4_CLOPE/98-223:0.58670,Q97G26_CLOAB/98-223:0.39842):0.27867,Q97D77_CLOAB/94-215:0.92640):0.19487):0.24596,(((((Q8XXJ6_RALSO/100-224:0.70736,Q9I3J3_PSEAE/95-218:0.40357):0.17800,(Q8YBS9_BRUME/90-213:0.32680,Q92YH4_RHIME/85-208:0.38289):0.40466):0.35401,Q92WT1_RHIME/91-217:1.18319):0.11602,(Q9LBW6_MYCGS/59-182:0.56669,Q9XDB1_MYCSM/105-226:0.66851):0.50450):0.10363,(Q98GE5_RHILO/89-214:0.84446,(Q987M8_RHILO/84-207:0.73091,Q8NLM6_CORGL/97-221:1.14268):0.00000):0.22458):0.16585):0.00000):0.16781,(((Q93JH0_STRCO/97-221:0.98554,Q9S276_STRCO/95-218:0.42931):0.18030,Q8Y8F6_LISMO/94-217:0.71600):0.19512,Q8YFY9_BRUME/92-214:0.70779):0.26482):0.05328,((Q9HTK2_PSEAE/94-225:0.67994,((((Q8XDF8_ECO57/100-224:0.57277,(Q8KTI5_AZOVI/99-231:0.19727,Q9HV39_PSEAE/99-230:0.10129):0.33862):0.12730,(Q8ZBJ0_YERPE/99-227:0.29587,Q9KPF3_VIBCH/99-227:0.25345):0.42117):0.11277,(O33960_RHOCA/99-227:0.40005,((Q8YB35_BRUME/102-230:0.30094,(Q8UHL8_AGRT5/102-230:0.29708,Q92RS5_RHIME/117-245:0.27587):0.14537):0.08633,Q987U2_RHILO/101-229:0.25117):0.22615):0.29194):0.04151,Q9JT55_NEIMA/98-226:0.89775):0.21710):0.14071,(Q92WH8_RHIME/102-228:0.89246,((O07007_BACSU/78-205:0.36696,Q9KBT9_BACHD/78-203:0.40730):0.34599,(((Q8U8A7_AGRT5/101-228:1.01623,Q8YDV3_BRUME/127-254:0.63751):0.15004,(((Q8UBW0_AGRT5/101-226:0.50217,Q930R5_RHIME/99-224:0.17719):0.18589,Q982M5_RHILO/101-226:0.66909):0.28607,Q93TD5_PSEYM/96-222:1.10947):0.22041):0.03608,((Q8UKM5_AGRT5/94-223:0.92410,(((Q8U732_AGRT5/99-225:0.54891,Q8UAB3_AGRT5/99-226:0.55174):0.16228,(Q8UB73_AGRT5/104-232:0.44338,Q92V08_RHIME/98-226:0.52740):0.13328):0.11798,Q92YS5_RHIME/105-233:0.52628):0.22873):0.04480,(Q92T71_RHIME/98-228:0.40843,Q92X56_RHIME/101-231:0.76421):0.32007):0.08059):0.18655):0.12972):0.02684):0.16794):0.12401,Q9RJQ8_STRCO/118-240:0.77892):0.07070):0.12004):0.04340):0.13429,(Q9JP85_STRSO/81-203:1.43297,(Q92W83_RHIME/118-247:0.97562,P96570_BURCE/116-246:0.74861):0.45127):0.22175):0.13050):0.24199):1.13674,Q92TE0_RHIME/154-282:0.16416,Q98GH2_RHILO/106-234:0.33307);