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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07729 phylogeny
for nucleotide alignment


 
((((((((((((Q8Y8F6_LISMO/94-217,Q9K840_BACHD/95-217),((Q96XF5_SULTO/74-198,Q97YR4_SULSO/74-197),((Q8XNM4_CLOPE/98-223,Q97G26_CLOAB/98-223),Q97D77_CLOAB/94-215))),(O07007_BACSU/78-205,Q9KBT9_BACHD/78-203)),((Q8ZGL0_YERPE/109-236,Q8ZIC9_YERPE/95-219),Q8ZM57_SALTY/111-241)),Q8XFI2_SALTI/128-256),Q93TD5_PSEYM/96-222),((((Q8U8A7_AGRT5/101-228,Q8YDV3_BRUME/127-254),(((Q8U732_AGRT5/99-225,Q8UAB3_AGRT5/99-226),Q92YS5_RHIME/105-233),(Q8UB73_AGRT5/104-232,Q92V08_RHIME/98-226))),(Q92T71_RHIME/98-228,Q92X56_RHIME/101-231)),(Q8UKM5_AGRT5/94-223,((Q8UBW0_AGRT5/101-226,Q930R5_RHIME/99-224),Q982M5_RHILO/101-226)))),(((Q9JT55_NEIMA/98-226,(((Q8ZBJ0_YERPE/99-227,Q9KPF3_VIBCH/99-227),Q8XDF8_ECO57/100-224),(Q8KTI5_AZOVI/99-231,Q9HV39_PSEAE/99-230))),(O33960_RHOCA/99-227,((Q8YB35_BRUME/102-230,Q987U2_RHILO/101-229),(Q8UHL8_AGRT5/102-230,Q92RS5_RHIME/117-245)))),Q9HTK2_PSEAE/94-225)),(Q92WH8_RHIME/102-228,Q8YFY9_BRUME/92-214)),(((((((Q8XAW3_ECO57/106-227,Q8ZJS6_YERPE/106-227),Q986V4_RHILO/118-240),((Q8NMP1_CORGL/115-241,Q8NPU3_CORGL/113-239),Q8ZKY9_SALTY/97-220)),(Q92W54_RHIME/117-239,Q987E9_RHILO/119-242)),(((Q8UEG9_AGRT5/110-234,(Q92PR5_RHIME/109-233,Q92UR2_RHIME/106-230)),Q8YD25_BRUME/106-230),Q98K08_RHILO/129-250)),Q9AA25_CAUCR/100-221),(((Q8UB41_AGRT5/106-228,Q92MV0_RHIME/106-228),Q98LV8_RHILO/119-242),((Q986F7_RHILO/88-213,Q8UIM2_AGRT5/99-224),Q931B4_RHIME/135-260)))),((Q9RJQ8_STRCO/118-240,(((Q92WG1_RHIME/103-225,Q987L0_RHILO/104-226),Q92WP5_RHIME/101-223),(Q92W83_RHIME/118-247,P96570_BURCE/116-246))),(((Q8UAW5_AGRT5/94-221,Q92WC0_RHIME/93-219),Q8UBN0_AGRT5/96-222),(Q9A4L7_CAUCR/91-215,Q9A9J4_CAUCR/93-219)))),((((((Q9LBW6_MYCGS/59-182,Q9XDB1_MYCSM/105-226),Q92WT1_RHIME/91-217),((Q8XXJ6_RALSO/100-224,Q9I3J3_PSEAE/95-218),(Q8YBS9_BRUME/90-213,Q92YH4_RHIME/85-208))),((Q9A510_CAUCR/104-230,Q9JP85_STRSO/81-203),Q98GE5_RHILO/89-214)),(Q92TP2_RHIME/95-219,Q9RW54_DEIRA/111-233)),(Q930W0_RHIME/77-201,Q987M8_RHILO/84-207)),((((Q8NMC7_CORGL/105-231,Q8YBP1_BRUME/102-224),Q8NLM6_CORGL/97-221),(Q8U9D4_AGRT5/100-221,Q9RFN7_RHIET/104-225)),(((Q9A8D4_CAUCR/115-237,(Q8XSY6_RALSO/156-284,Q98EL7_RHILO/163-288)),Q9X9Y2_STRCO/83-202),((((Q9RJZ3_STRCO/106-230,Q9RT60_DEIRA/106-231),(Q9FBS4_STRCO/85-210,Q9RJW6_STRCO/275-400)),((O50536_STRCO/157-281,(Q92TE0_RHIME/154-282,Q98GH2_RHILO/106-234)),Q9RJV3_STRCO/103-226)),((Q93JH0_STRCO/97-221,O88071_STRCO/105-226),Q9S276_STRCO/95-218)))));
((((((((((((Q8Y8F6_LISMO/94-217:0.44356,Q9K840_BACHD/95-217:0.51101):0.10128,((Q96XF5_SULTO/74-198:0.19072,Q97YR4_SULSO/74-197:0.29567):0.23179,((Q8XNM4_CLOPE/98-223:0.29905,Q97G26_CLOAB/98-223:0.32594):0.09529,Q97D77_CLOAB/94-215:0.45951):0.07553):0.16280):0.11184,(O07007_BACSU/78-205:0.38235,Q9KBT9_BACHD/78-203:0.28264):0.18692):0.13323,((Q8ZGL0_YERPE/109-236:0.33990,Q8ZIC9_YERPE/95-219:0.47532):0.07477,Q8ZM57_SALTY/111-241:0.44000):0.22478):0.06814,Q8XFI2_SALTI/128-256:0.53392):0.07484,Q93TD5_PSEYM/96-222:0.63279):0.24250,((((Q8U8A7_AGRT5/101-228:0.50353,Q8YDV3_BRUME/127-254:0.41696):0.18048,(((Q8U732_AGRT5/99-225:0.36478,Q8UAB3_AGRT5/99-226:0.35105):0.08962,Q92YS5_RHIME/105-233:0.35835):0.05510,(Q8UB73_AGRT5/104-232:0.29008,Q92V08_RHIME/98-226:0.35774):0.12363):0.14836):0.02344,(Q92T71_RHIME/98-228:0.40331,Q92X56_RHIME/101-231:0.49396):0.17311):0.00000,(Q8UKM5_AGRT5/94-223:0.55539,((Q8UBW0_AGRT5/101-226:0.28378,Q930R5_RHIME/99-224:0.26377):0.11108,Q982M5_RHILO/101-226:0.42843):0.11175):0.11408):0.13874):0.05833,(((Q9JT55_NEIMA/98-226:0.49253,(((Q8ZBJ0_YERPE/99-227:0.23083,Q9KPF3_VIBCH/99-227:0.30549):0.25879,Q8XDF8_ECO57/100-224:0.43800):0.07730,(Q8KTI5_AZOVI/99-231:0.16150,Q9HV39_PSEAE/99-230:0.14428):0.29216):0.04187):0.10234,(O33960_RHOCA/99-227:0.29758,((Q8YB35_BRUME/102-230:0.26799,Q987U2_RHILO/101-229:0.20339):0.03755,(Q8UHL8_AGRT5/102-230:0.24486,Q92RS5_RHIME/117-245:0.25290):0.08345):0.10196):0.08586):0.17264,Q9HTK2_PSEAE/94-225:0.39965):0.09881):0.02349,(Q92WH8_RHIME/102-228:0.38766,Q8YFY9_BRUME/92-214:0.52403):0.08852):0.07615,(((((((Q8XAW3_ECO57/106-227:0.14502,Q8ZJS6_YERPE/106-227:0.41566):0.46538,Q986V4_RHILO/118-240:0.32728):0.07213,((Q8NMP1_CORGL/115-241:0.13313,Q8NPU3_CORGL/113-239:0.27320):0.42856,Q8ZKY9_SALTY/97-220:0.52809):0.19964):0.09235,(Q92W54_RHIME/117-239:0.48142,Q987E9_RHILO/119-242:0.37602):0.09185):0.03396,(((Q8UEG9_AGRT5/110-234:0.38776,(Q92PR5_RHIME/109-233:0.19661,Q92UR2_RHIME/106-230:0.19682):0.08993):0.04874,Q8YD25_BRUME/106-230:0.33895):0.23058,Q98K08_RHILO/129-250:0.43840):0.09206):0.04312,Q9AA25_CAUCR/100-221:0.49194):0.07681,(((Q8UB41_AGRT5/106-228:0.18600,Q92MV0_RHIME/106-228:0.07803):0.22255,Q98LV8_RHILO/119-242:0.28855):0.20813,((Q986F7_RHILO/88-213:0.31065,Q8UIM2_AGRT5/99-224:0.26445):0.09040,Q931B4_RHIME/135-260:0.16011):0.31701):0.09840):0.03076):0.05692,((Q9RJQ8_STRCO/118-240:0.36748,(((Q92WG1_RHIME/103-225:0.18569,Q987L0_RHILO/104-226:0.18115):0.28138,Q92WP5_RHIME/101-223:0.42480):0.11384,(Q92W83_RHIME/118-247:0.49557,P96570_BURCE/116-246:0.53324):0.27722):0.09705):0.03652,(((Q8UAW5_AGRT5/94-221:0.34698,Q92WC0_RHIME/93-219:0.33749):0.07244,Q8UBN0_AGRT5/96-222:0.45281):0.19485,(Q9A4L7_CAUCR/91-215:0.15728,Q9A9J4_CAUCR/93-219:0.25416):0.17795):0.13988):0.02106):0.04747,((((((Q9LBW6_MYCGS/59-182:0.44533,Q9XDB1_MYCSM/105-226:0.45058):0.21284,Q92WT1_RHIME/91-217:0.54219):0.01201,((Q8XXJ6_RALSO/100-224:0.38399,Q9I3J3_PSEAE/95-218:0.28473):0.08128,(Q8YBS9_BRUME/90-213:0.32777,Q92YH4_RHIME/85-208:0.30632):0.23529):0.21275):0.07613,((Q9A510_CAUCR/104-230:0.45265,Q9JP85_STRSO/81-203:0.51300):0.06718,Q98GE5_RHILO/89-214:0.46116):0.06180):0.05944,(Q92TP2_RHIME/95-219:0.48698,Q9RW54_DEIRA/111-233:0.49691):0.14229):0.00000,(Q930W0_RHIME/77-201:0.54606,Q987M8_RHILO/84-207:0.41637):0.20802):0.07862,((((Q8NMC7_CORGL/105-231:0.35507,Q8YBP1_BRUME/102-224:0.55167):0.16164,Q8NLM6_CORGL/97-221:0.62497):0.10665,(Q8U9D4_AGRT5/100-221:0.30261,Q9RFN7_RHIET/104-225:0.19590):0.26017):0.16855,(((Q9A8D4_CAUCR/115-237:0.44156,(Q8XSY6_RALSO/156-284:0.43332,Q98EL7_RHILO/163-288:0.48328):0.20291):0.11401,Q9X9Y2_STRCO/83-202:0.52137):0.12862,((((Q9RJZ3_STRCO/106-230:0.36160,Q9RT60_DEIRA/106-231:0.43477):0.12835,(Q9FBS4_STRCO/85-210:0.22785,Q9RJW6_STRCO/275-400:0.31996):0.29516):0.10815,((O50536_STRCO/157-281:0.32493,(Q92TE0_RHIME/154-282:0.19040,Q98GH2_RHILO/106-234:0.18700):0.43441):0.08493,Q9RJV3_STRCO/103-226:0.47008):0.08838):0.03978,((Q93JH0_STRCO/97-221:0.41036,O88071_STRCO/105-226:0.42365):0.09931,Q9S276_STRCO/95-218:0.41510):0.15347):0.00229):0.01595):0.09160);