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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF07724 phylogeny |
| ((((((((((((((((((((((((((ERD1_ARATH/655-831,Q8GT62_ORYSA/651-825),Q8YVL2_ANASP/530-704),CLPC_ODOSI/551-746),(Q8CV76_OCEIH/451-615,Q837W9_ENTFA/473-638)),((CLPB_CANBF/598-762,(CLPB_COXBU/598-761,CLPB_HAEDU/596-759)),(((((Q97KL3_CLOAB/491-656,Q8XHP1_CLOPE/542-715),(Q8E5L4_STRA3/352-521,O51774_BORBU/472-645)),((Q7V378_PROMP/645-818,Q8IB03_PLAF7/807-972),(Q9MTD7_TOXGO/477-650,CLPB_CLOTE/602-767))),(((Q9PQ99_UREPA/450-606,CLPB_MYCPE/450-606),CLPB_MYCGE/457-613),((CLPB_LEPIN/601-763,CLPB_CHLTR/596-764),CLPB_STAAW/600-766))),(((CLPB_LACLC/599-765,CLPB_LACPL/598-764),CLPB_LISMO/602-767),CLPB_STRMU/594-760)))),((CLPB_OCEIH/539-711,Q8NXY8_STAAW/536-708),(Q82YZ7_ENTFA/546-718,(Q9CHS9_LACLA/545-717,Q88XZ5_LACPL/550-722)))),((((CLPB_TROWT/446-606,Q9ZT13_TOBAC/597-762),Q7PAG5_RICSI/595-759),((Q96W68_CANAL/603-766,HS104_YEAST/606-769),O94641_SCHPO/612-779)),(((HSP78_YEAST/532-700,HSP78_CANAL/525-693),(O74402_SCHPO/530-694,Q873Z4_LEPMC/536-708)),(CLPB_BACTN/594-765,(Q9SK30_ARATH/36-156,(((CLPB_HELPY/596-758,CLPB2_SYNY3/602-767),CLPB_TREPA/600-778),(((Q7YVC9_9TRYP/532-696,CLPC_CHLPN/560-731),(((O83560_TREPA/533-705,Q7V482_PROMM/653-826),(CLPB1_CHLTE/169-340,(((((O00828_LEIDO/596-761,CLP_TRYBB/594-759),CLPB_BRAJA/597-761),((((Q9I0L8_PSEAE/491-652,Q8P998_XANCP/489-650),(Q9RWS7_DEIRA/482-643,(Q9A5H9_CAUCR/498-659,CLPA_RHOBL/516-677))),Q7NRW0_CHRVO/491-652),Q7UPS5_RHOBA/555-727)),((CLPB_BORPE/602-765,((Q93IZ7_STRCO/564-726,Q9RVB2_DEIRA/477-637),(AMIB_PSEAE/87-270,ADPR_RHOER/70-250))),(Q7NKD6_GLOVI/490-665,(Q82EB8_STRAW/540-713,CLPC_MYCTU/544-716)))),(Q8KFX9_CHLTE/558-734,((((Q8XRT2_RALSO/634-803,(Q88IA4_PSEPK/609-776,(Q98IM7_RHILO/677-844,Q89P96_BRAJA/611-778))),(Q8U7V5_AGRT5/593-760,(CLPB_YEREN/617-784,Q8Z973_SALTI/609-776))),((Q9I363_PSEAE/610-776,(Q87PV8_VIBPA/623-789,Q8ZB30_YERPE/602-763)),Q8FED3_ECOL6/608-774)),Q8ZIJ2_YERPE/600-766))))),SKD3_MOUSE/343-535)),Q9WY41_THEMA/539-713))))))),((Q7QN88_ANOGA/301-462,Q93CN5_BACFR/164-337),Q8NPM2_CORGL/320-482)),((Q97I30_CLOAB/488-650,O83779_TREPA/531-693),(Q8F4D7_LEPIN/482-643,((O24875_HELPY/474-632,Q7MAC5_WOLSU/474-632),Q7VFW1_HELHP/479-637)))),CLPX_CHLCV/113-312),CLPX_HELHP/119-316),(Q7P9I7_RICSI/107-306,CLPX_LEPIN/112-311)),CLPX_STAAW/108-305),(((((CLPX_PORGI/109-307,CLPX_HELPY/140-337),(((((CLPX_DEIRA/102-296,(CLPX_RALSO/113-312,CLPX_MYXXA/111-310)),(CLPX_AZOVI/110-309,CLPX_AZOBR/109-308)),Q8G5R1_BIFLO/170-369),(CLPX_THEMA/101-300,CLPX_CHLTE/129-328)),CLPX_RHOBA/160-359)),CLPX2_WOLSU/101-289),Q8GDW8_HELMO/108-307),CLPX_TROWT/116-311)),CLPX_LACLC/107-304),(HSLU_LACPL/200-358,(((Q819X7_BACCR/190-349,HSLU_LISMO/196-355),HSLU_BACHD/191-350),HSLU_OCEIH/192-351))),((Q7PBF6_RICSI/170-336,Q8I377_PLAF7/639-808),(Q7VJD4_HELHP/170-330,(Q7M8Z7_WOLSU/166-326,HSLU_HELPY/171-329)))),HSLU_THETN/187-347),HSLU_AQUAE/177-336),O06676_TREDE/104-268),HSLU_CHLTE/208-372),(Q8I0E1_LEIIN/229-389,Q7RTL8_9TRYP/235-396)),((((((Q83A94_COXBU/175-333,HSLU_BUCBP/170-329),HSLU_VIBCH/170-329),Q82SP6_NITEU/170-329),HSLU_XYLFA/186-345),(Q7WQZ4_BORBR/171-330,HSLU_RALSO/170-329)),Q7P112_CHRVO/177-337)),(HSLU_CAUCR/158-316,Q8KYU8_9PROT/159-321)),HSLU_BRAJA/159-320),HSLU_BRUSU/159-320,HSLU_AGRT5/159-321); |
| ((((((((((((((((((((((((((ERD1_ARATH/655-831:0.13227,Q8GT62_ORYSA/651-825:0.16927):0.17219,Q8YVL2_ANASP/530-704:0.16369):0.10717,CLPC_ODOSI/551-746:0.15199):0.06128,(Q8CV76_OCEIH/451-615:0.20555,Q837W9_ENTFA/473-638:0.15610):0.14722):0.04623,((CLPB_CANBF/598-762:0.12875,(CLPB_COXBU/598-761:0.18118,CLPB_HAEDU/596-759:0.16595):0.06120):0.10345,(((((Q97KL3_CLOAB/491-656:0.20694,Q8XHP1_CLOPE/542-715:0.18465):0.06545,(Q8E5L4_STRA3/352-521:0.31474,O51774_BORBU/472-645:0.43962):0.10752):0.05633,((Q7V378_PROMP/645-818:0.22335,Q8IB03_PLAF7/807-972:0.24076):0.03318,(Q9MTD7_TOXGO/477-650:0.28967,CLPB_CLOTE/602-767:0.14725):0.05275):0.02443):0.03485,(((Q9PQ99_UREPA/450-606:0.19698,CLPB_MYCPE/450-606:0.18398):0.04849,CLPB_MYCGE/457-613:0.18384):0.02946,((CLPB_LEPIN/601-763:0.20593,CLPB_CHLTR/596-764:0.23293):0.09243,CLPB_STAAW/600-766:0.16545):0.05405):0.03728):0.04535,(((CLPB_LACLC/599-765:0.15452,CLPB_LACPL/598-764:0.20621):0.07127,CLPB_LISMO/602-767:0.17556):0.04917,CLPB_STRMU/594-760:0.26065):0.05615):0.01294):0.01827):0.03050,((CLPB_OCEIH/539-711:0.15198,Q8NXY8_STAAW/536-708:0.14635):0.03856,(Q82YZ7_ENTFA/546-718:0.16777,(Q9CHS9_LACLA/545-717:0.16998,Q88XZ5_LACPL/550-722:0.21227):0.06390):0.05375):0.04904):0.04726,((((CLPB_TROWT/446-606:0.28402,Q9ZT13_TOBAC/597-762:0.23077):0.04927,Q7PAG5_RICSI/595-759:0.28646):0.05029,((Q96W68_CANAL/603-766:0.15210,HS104_YEAST/606-769:0.25004):0.16854,O94641_SCHPO/612-779:0.19788):0.11675):0.03918,(((HSP78_YEAST/532-700:0.18478,HSP78_CANAL/525-693:0.20705):0.06890,(O74402_SCHPO/530-694:0.14990,Q873Z4_LEPMC/536-708:0.36537):0.10463):0.10986,(CLPB_BACTN/594-765:0.20642,(Q9SK30_ARATH/36-156:0.37320,(((CLPB_HELPY/596-758:0.30342,CLPB2_SYNY3/602-767:0.21229):0.05797,CLPB_TREPA/600-778:0.26051):0.07395,(((Q7YVC9_9TRYP/532-696:0.28806,CLPC_CHLPN/560-731:0.32441):0.06266,(((O83560_TREPA/533-705:0.30962,Q7V482_PROMM/653-826:0.24249):0.06835,(CLPB1_CHLTE/169-340:0.13224,(((((O00828_LEIDO/596-761:0.12892,CLP_TRYBB/594-759:0.26816):0.10042,CLPB_BRAJA/597-761:0.14637):0.04341,((((Q9I0L8_PSEAE/491-652:0.07190,Q8P998_XANCP/489-650:0.19397):0.06411,(Q9RWS7_DEIRA/482-643:0.19634,(Q9A5H9_CAUCR/498-659:0.10752,CLPA_RHOBL/516-677:0.15847):0.03289):0.03711):0.04026,Q7NRW0_CHRVO/491-652:0.10083):0.13614,Q7UPS5_RHOBA/555-727:0.25775):0.05345):0.02222,((CLPB_BORPE/602-765:0.15237,((Q93IZ7_STRCO/564-726:0.13247,Q9RVB2_DEIRA/477-637:0.28341):0.02696,(AMIB_PSEAE/87-270:0.24395,ADPR_RHOER/70-250:0.31045):0.24738):0.03890):0.03051,(Q7NKD6_GLOVI/490-665:0.20968,(Q82EB8_STRAW/540-713:0.10611,CLPC_MYCTU/544-716:0.15442):0.05278):0.03514):0.02482):0.03079,(Q8KFX9_CHLTE/558-734:0.15021,((((Q8XRT2_RALSO/634-803:0.12170,(Q88IA4_PSEPK/609-776:0.11945,(Q98IM7_RHILO/677-844:0.14103,Q89P96_BRAJA/611-778:0.12619):0.10145):0.02265):0.02663,(Q8U7V5_AGRT5/593-760:0.26451,(CLPB_YEREN/617-784:0.31278,Q8Z973_SALTI/609-776:0.08927):0.12862):0.06855):0.04988,((Q9I363_PSEAE/610-776:0.10809,(Q87PV8_VIBPA/623-789:0.23235,Q8ZB30_YERPE/602-763:0.25375):0.07260):0.04880,Q8FED3_ECOL6/608-774:0.27808):0.04105):0.05897,Q8ZIJ2_YERPE/600-766:0.40296):0.17821):0.03217):0.03405):0.09254):0.03998,SKD3_MOUSE/343-535:0.44005):0.03622):0.05479,Q9WY41_THEMA/539-713:0.26756):0.07457):0.04346):0.04744):0.06175):0.04502):0.03527):0.06620,((Q7QN88_ANOGA/301-462:0.19034,Q93CN5_BACFR/164-337:0.22078):0.10355,Q8NPM2_CORGL/320-482:0.58901):0.04302):0.07296,((Q97I30_CLOAB/488-650:0.18038,O83779_TREPA/531-693:0.32062):0.08959,(Q8F4D7_LEPIN/482-643:0.23029,((O24875_HELPY/474-632:0.29969,Q7MAC5_WOLSU/474-632:0.27707):0.09751,Q7VFW1_HELHP/479-637:0.20383):0.09029):0.04638):0.07881):0.62942,CLPX_CHLCV/113-312:0.21227):0.04693,CLPX_HELHP/119-316:0.21379):0.04879,(Q7P9I7_RICSI/107-306:0.22672,CLPX_LEPIN/112-311:0.23602):0.06248):0.05793,CLPX_STAAW/108-305:0.17111):0.03503,(((((CLPX_PORGI/109-307:0.20642,CLPX_HELPY/140-337:0.27773):0.09353,(((((CLPX_DEIRA/102-296:0.19473,(CLPX_RALSO/113-312:0.15230,CLPX_MYXXA/111-310:0.10254):0.02521):0.02265,(CLPX_AZOVI/110-309:0.29727,CLPX_AZOBR/109-308:0.11807):0.03611):0.03951,Q8G5R1_BIFLO/170-369:0.25605):0.04366,(CLPX_THEMA/101-300:0.24433,CLPX_CHLTE/129-328:0.15740):0.07420):0.03706,CLPX_RHOBA/160-359:0.18332):0.05415):0.05266,CLPX2_WOLSU/101-289:0.37359):0.04475,Q8GDW8_HELMO/108-307:0.14218):0.12258,CLPX_TROWT/116-311:0.24792):0.08566):0.05916,CLPX_LACLC/107-304:0.08619):0.59691,(HSLU_LACPL/200-358:0.42297,(((Q819X7_BACCR/190-349:0.14156,HSLU_LISMO/196-355:0.29704):0.04374,HSLU_BACHD/191-350:0.22177):0.06528,HSLU_OCEIH/192-351:0.17639):0.03380):0.06167):0.04417,((Q7PBF6_RICSI/170-336:0.25550,Q8I377_PLAF7/639-808:0.38905):0.07032,(Q7VJD4_HELHP/170-330:0.15536,(Q7M8Z7_WOLSU/166-326:0.32434,HSLU_HELPY/171-329:0.21611):0.08835):0.27948):0.10345):0.11511,HSLU_THETN/187-347:0.22733):0.08280,HSLU_AQUAE/177-336:0.22141):0.12162,O06676_TREDE/104-268:0.38867):0.13679,HSLU_CHLTE/208-372:0.23992):0.14375,(Q8I0E1_LEIIN/229-389:0.07517,Q7RTL8_9TRYP/235-396:0.36904):0.40723):0.02796,((((((Q83A94_COXBU/175-333:0.22987,HSLU_BUCBP/170-329:0.24841):0.09410,HSLU_VIBCH/170-329:0.11859):0.09514,Q82SP6_NITEU/170-329:0.19191):0.05844,HSLU_XYLFA/186-345:0.31110):0.09495,(Q7WQZ4_BORBR/171-330:0.16911,HSLU_RALSO/170-329:0.10123):0.03757):0.04582,Q7P112_CHRVO/177-337:0.07256):0.07802):0.09718,(HSLU_CAUCR/158-316:0.15360,Q8KYU8_9PROT/159-321:0.34172):0.04091):0.04379,HSLU_BRAJA/159-320:0.11645):0.07838,HSLU_BRUSU/159-320:0.12367,HSLU_AGRT5/159-321:0.17442); 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