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Protein and Associated NucleotideDomains with Inferred Trees

PF07724 phylogeny
for amino acid alignment


 
(((((((((((((((((((((CLPB_HELPY/596-758,CLPB_STAAW/600-766),(CLPB_LACLC/599-765,(CLPB_LISMO/602-767,CLPB_LACPL/598-764))),CLPB_CLOTE/602-767),((((((((O24875_HELPY/474-632,Q7VFW1_HELHP/479-637),Q7MAC5_WOLSU/474-632),(Q8F4D7_LEPIN/482-643,(Q7NRW0_CHRVO/491-652,((Q9I0L8_PSEAE/491-652,Q8P998_XANCP/489-650),((CLPA_RHOBL/516-677,Q9A5H9_CAUCR/498-659),Q9RWS7_DEIRA/482-643))))),(O83779_TREPA/531-693,Q97I30_CLOAB/488-650)),(Q7YN63_EIMTE/458-631,Q9MTD7_TOXGO/477-650)),Q9RVB2_DEIRA/477-637),((Q8CV76_OCEIH/451-615,Q837W9_ENTFA/473-638),Q97KL3_CLOAB/491-656)),((Q9PQ99_UREPA/450-606,CLPB_MYCPE/450-606),CLPB_MYCGE/457-613))),((((CLPB_TREPA/600-778,CLPB_LEPIN/601-763),((CLPB_BORPE/602-765,(((CLPB_CANBF/598-762,CLPB_COXBU/598-761),CLPB_HAEDU/596-759),CLPB_RHOBA/619-784)),(((Q9SK30_ARATH/36-156,Q8IB03_PLAF7/807-972),CLPB2_SYNY3/602-767),(((O00828_LEIDO/596-761,CLP_TRYBB/594-759),Q9ZT13_TOBAC/597-762),(((((HSP78_YEAST/532-700,HSP78_CANAL/525-693),(O74402_SCHPO/530-694,Q873Z4_LEPMC/536-708)),((Q7YVC9_9TRYP/532-696,CLPB_TROWT/446-606),Q7PAG5_RICSI/595-759)),CLPB_BRAJA/597-761),((Q96W68_CANAL/603-766,HS104_YEAST/606-769),O94641_SCHPO/612-779)))))),(CLPB1_CHLTE/169-340,CLPB_BACTN/594-765)),(Q9WY41_THEMA/539-713,(((((ERD1_ARATH/655-831,Q8GT62_ORYSA/651-825),(Q7NKD6_GLOVI/490-665,Q8YVL2_ANASP/530-704)),CLPC_ODOSI/551-746),(Q82EB8_STRAW/540-713,CLPC_MYCTU/544-716)),((((O83560_TREPA/533-705,(Q7UPS5_RHOBA/555-727,CLPC_CHLPN/560-731)),((Q7QN88_ANOGA/301-462,Q93CN5_BACFR/164-337),Q8KFX9_CHLTE/558-734)),(CLPB_OCEIH/539-711,((Q9CHS9_LACLA/545-717,Q88XZ5_LACPL/550-722),Q82YZ7_ENTFA/546-718))),(Q8XHP1_CLOPE/542-715,Q8NXY8_STAAW/536-708)))))),((Q7V378_PROMP/645-818,Q7V482_PROMM/653-826),CLPB_STRMU/594-760)),Q93IZ7_STRCO/564-726),(CLPB_CHLTR/596-764,(SKD3_MOUSE/343-535,(((Q9I363_PSEAE/610-776,Q87PV8_VIBPA/623-789),(Q8U7V5_AGRT5/593-760,(Q8FED3_ECOL6/608-774,((Q88IA4_PSEPK/609-776,Q8XRT2_RALSO/634-803),(Q8ZIJ2_YERPE/600-766,((Q98IM7_RHILO/677-844,Q89P96_BRAJA/611-778),(CLPB_YEREN/617-784,Q8Z973_SALTI/609-776))))))),Q8ZB30_YERPE/602-763)))),(Q8E5L4_STRA3/352-521,O51774_BORBU/472-645)),Q8NPM2_CORGL/320-482),(AMIB_PSEAE/87-270,ADPR_RHOER/70-250)),(CLPX2_WOLSU/101-289,(((CLPX_RHOBA/160-359,((((Q8GDW8_HELMO/108-307,(CLPX_LEPIN/112-311,((CLPX_RALSO/113-312,(Q7P9I7_RICSI/107-306,CLPX_AZOBR/109-308)),CLPX_MYXXA/111-310))),((CLPX_STAAW/108-305,CLPX_LACLC/107-304),CLPX_TROWT/116-311)),((CLPX_CHLTE/129-328,(CLPX_PORGI/109-307,(CLPX_HELHP/119-316,CLPX_HELPY/140-337))),CLPX_THEMA/101-300)),(CLPX_DEIRA/102-296,CLPX_CHLCV/113-312))),Q8G5R1_BIFLO/170-369),CLPX_AZOVI/110-309))),(Q8I0E1_LEIIN/229-389,Q7RTL8_9TRYP/235-396)),Q8I377_PLAF7/639-808),(Q7M8Z7_WOLSU/166-326,(Q7VJD4_HELHP/170-330,HSLU_HELPY/171-329))),O06676_TREDE/104-268),((HSLU_LISMO/196-355,(((HSLU_BACHD/191-350,HSLU_OCEIH/192-351),Q819X7_BACCR/190-349),(HSLU_LACPL/200-358,HSLU_LACLE/193-350))),((HSLU_THETN/187-347,HSLU_CHLTE/208-372),HSLU_AQUAE/177-336))),(Q83A94_COXBU/175-333,(HSLU_XYLFA/186-345,((HSLU_VIBCH/170-329,HSLU_BUCBP/170-329),(((Q7WQZ4_BORBR/171-330,HSLU_RALSO/170-329),Q7P112_CHRVO/177-337),Q82SP6_NITEU/170-329))))),(HSLU_BRAJA/159-320,Q8KYU8_9PROT/159-321)),(Q7PBF6_RICSI/170-336,HSLU_CAUCR/158-316)),HSLU_BRUSU/159-320,HSLU_AGRT5/159-321);
(((((((((((((((((((((CLPB_HELPY/596-758:0.25445,CLPB_STAAW/600-766:0.08589):0.07997,(CLPB_LACLC/599-765:0.10702,(CLPB_LISMO/602-767:0.11283,CLPB_LACPL/598-764:0.13015):0.06731):0.03095):0.04623,CLPB_CLOTE/602-767:0.14890):0.03040,((((((((O24875_HELPY/474-632:0.28037,Q7VFW1_HELHP/479-637:0.17683):0.10584,Q7MAC5_WOLSU/474-632:0.17310):0.11414,(Q8F4D7_LEPIN/482-643:0.18998,(Q7NRW0_CHRVO/491-652:0.15500,((Q9I0L8_PSEAE/491-652:0.07726,Q8P998_XANCP/489-650:0.19556):0.08447,((CLPA_RHOBL/516-677:0.12134,Q9A5H9_CAUCR/498-659:0.14668):0.05855,Q9RWS7_DEIRA/482-643:0.17173):0.08137):0.03221):0.10013):0.02952):0.03813,(O83779_TREPA/531-693:0.16215,Q97I30_CLOAB/488-650:0.18177):0.09344):0.25543,(Q7YN63_EIMTE/458-631:0.11836,Q9MTD7_TOXGO/477-650:0.20679):0.21963):0.05520,Q9RVB2_DEIRA/477-637:0.34671):0.05607,((Q8CV76_OCEIH/451-615:0.18931,Q837W9_ENTFA/473-638:0.09979):0.16145,Q97KL3_CLOAB/491-656:0.20380):0.05814):0.10021,((Q9PQ99_UREPA/450-606:0.21616,CLPB_MYCPE/450-606:0.19942):0.05020,CLPB_MYCGE/457-613:0.14320):0.08004):0.03563):0.03012,((((CLPB_TREPA/600-778:0.21348,CLPB_LEPIN/601-763:0.19266):0.04796,((CLPB_BORPE/602-765:0.14109,(((CLPB_CANBF/598-762:0.17669,CLPB_COXBU/598-761:0.08988):0.02341,CLPB_HAEDU/596-759:0.11408):0.04154,CLPB_RHOBA/619-784:0.16729):0.02905):0.05691,(((Q9SK30_ARATH/36-156:0.52861,Q8IB03_PLAF7/807-972:0.29399):0.03464,CLPB2_SYNY3/602-767:0.14471):0.08596,(((O00828_LEIDO/596-761:0.14244,CLP_TRYBB/594-759:0.13585):0.07170,Q9ZT13_TOBAC/597-762:0.12454):0.08330,(((((HSP78_YEAST/532-700:0.14462,HSP78_CANAL/525-693:0.14520):0.07420,(O74402_SCHPO/530-694:0.14828,Q873Z4_LEPMC/536-708:0.19795):0.08059):0.16625,((Q7YVC9_9TRYP/532-696:0.25623,CLPB_TROWT/446-606:0.24575):0.06966,Q7PAG5_RICSI/595-759:0.18166):0.04299):0.03080,CLPB_BRAJA/597-761:0.10480):0.02069,((Q96W68_CANAL/603-766:0.18298,HS104_YEAST/606-769:0.19975):0.17218,O94641_SCHPO/612-779:0.13326):0.16711):0.02629):0.03181):0.02549):0.02533):0.03462,(CLPB1_CHLTE/169-340:0.13739,CLPB_BACTN/594-765:0.12862):0.04357):0.03286,(Q9WY41_THEMA/539-713:0.18874,(((((ERD1_ARATH/655-831:0.07200,Q8GT62_ORYSA/651-825:0.12779):0.18154,(Q7NKD6_GLOVI/490-665:0.12160,Q8YVL2_ANASP/530-704:0.06185):0.05191):0.06147,CLPC_ODOSI/551-746:0.16629):0.07640,(Q82EB8_STRAW/540-713:0.07583,CLPC_MYCTU/544-716:0.14308):0.14687):0.05679,((((O83560_TREPA/533-705:0.34446,(Q7UPS5_RHOBA/555-727:0.14729,CLPC_CHLPN/560-731:0.40688):0.04438):0.05474,((Q7QN88_ANOGA/301-462:0.12662,Q93CN5_BACFR/164-337:0.20078):0.07410,Q8KFX9_CHLTE/558-734:0.07758):0.08837):0.03346,(CLPB_OCEIH/539-711:0.09897,((Q9CHS9_LACLA/545-717:0.14611,Q88XZ5_LACPL/550-722:0.11230):0.02350,Q82YZ7_ENTFA/546-718:0.10384):0.09354):0.04344):0.05166,(Q8XHP1_CLOPE/542-715:0.20703,Q8NXY8_STAAW/536-708:0.15886):0.04506):0.02966):0.02792):0.03477):0.02917):0.02035,((Q7V378_PROMP/645-818:0.13129,Q7V482_PROMM/653-826:0.15488):0.11181,CLPB_STRMU/594-760:0.23626):0.04183):0.02594,Q93IZ7_STRCO/564-726:0.27528):0.02302,(CLPB_CHLTR/596-764:0.21816,(SKD3_MOUSE/343-535:0.41373,(((Q9I363_PSEAE/610-776:0.05282,Q87PV8_VIBPA/623-789:0.17532):0.09093,(Q8U7V5_AGRT5/593-760:0.38489,(Q8FED3_ECOL6/608-774:0.26846,((Q88IA4_PSEPK/609-776:0.12014,Q8XRT2_RALSO/634-803:0.15039):0.01868,(Q8ZIJ2_YERPE/600-766:0.44767,((Q98IM7_RHILO/677-844:0.11355,Q89P96_BRAJA/611-778:0.11220):0.04698,(CLPB_YEREN/617-784:0.12891,Q8Z973_SALTI/609-776:0.14640):0.05444):0.04655):0.08955):0.10249):0.08743):0.00077):0.06957,Q8ZB30_YERPE/602-763:0.20469):0.37058):0.07973):0.07976):0.06114,(Q8E5L4_STRA3/352-521:0.29302,O51774_BORBU/472-645:0.76154):0.12952):0.18747,Q8NPM2_CORGL/320-482:0.64640):0.14905,(AMIB_PSEAE/87-270:0.38165,ADPR_RHOER/70-250:0.40962):0.20802):1.32415,(CLPX2_WOLSU/101-289:0.23310,(((CLPX_RHOBA/160-359:0.19117,((((Q8GDW8_HELMO/108-307:0.11078,(CLPX_LEPIN/112-311:0.16604,((CLPX_RALSO/113-312:0.12108,(Q7P9I7_RICSI/107-306:0.13942,CLPX_AZOBR/109-308:0.10653):0.05366):0.02328,CLPX_MYXXA/111-310:0.09909):0.02576):0.02501):0.03709,((CLPX_STAAW/108-305:0.11251,CLPX_LACLC/107-304:0.08800):0.02589,CLPX_TROWT/116-311:0.19479):0.05149):0.03101,((CLPX_CHLTE/129-328:0.19085,(CLPX_PORGI/109-307:0.24537,(CLPX_HELHP/119-316:0.07786,CLPX_HELPY/140-337:0.10943):0.15689):0.03388):0.03655,CLPX_THEMA/101-300:0.13455):0.05053):0.03411,(CLPX_DEIRA/102-296:0.17109,CLPX_CHLCV/113-312:0.22370):0.05585):0.00864):0.04916,Q8G5R1_BIFLO/170-369:0.22981):0.11113,CLPX_AZOVI/110-309:0.33743):0.11520):0.11946):0.90727,(Q8I0E1_LEIIN/229-389:0.13565,Q7RTL8_9TRYP/235-396:0.22640):0.37843):0.12370,Q8I377_PLAF7/639-808:0.47339):0.17501,(Q7M8Z7_WOLSU/166-326:0.15272,(Q7VJD4_HELHP/170-330:0.13881,HSLU_HELPY/171-329:0.17637):0.07275):0.38032):0.08209,O06676_TREDE/104-268:0.43717):0.06234,((HSLU_LISMO/196-355:0.26834,(((HSLU_BACHD/191-350:0.12793,HSLU_OCEIH/192-351:0.13744):0.04471,Q819X7_BACCR/190-349:0.13279):0.04335,(HSLU_LACPL/200-358:0.30408,HSLU_LACLE/193-350:0.12239):0.19832):0.04279):0.11971,((HSLU_THETN/187-347:0.23907,HSLU_CHLTE/208-372:0.26275):0.03141,HSLU_AQUAE/177-336:0.24194):0.07249):0.05125):0.11494,(Q83A94_COXBU/175-333:0.15451,(HSLU_XYLFA/186-345:0.24460,((HSLU_VIBCH/170-329:0.02694,HSLU_BUCBP/170-329:0.18155):0.12016,(((Q7WQZ4_BORBR/171-330:0.15163,HSLU_RALSO/170-329:0.11707):0.04522,Q7P112_CHRVO/177-337:0.15746):0.05529,Q82SP6_NITEU/170-329:0.14717):0.04652):0.03472):0.04975):0.10738):0.21531,(HSLU_BRAJA/159-320:0.15391,Q8KYU8_9PROT/159-321:0.26821):0.05681):0.02888,(Q7PBF6_RICSI/170-336:0.18056,HSLU_CAUCR/158-316:0.17756):0.07484):0.04850,HSLU_BRUSU/159-320:0.11525,HSLU_AGRT5/159-321:0.15747);