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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF07694 - 5TM-5TMR_LYT) |
| 5TMR of 5TMR-LYT |
| (Pfam reference: accession no. PF07694) |
| (Interpro reference: accession no. IPR011620) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
27 sequences @ 108 aa (ave. pairwise identity: 0.27) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 21.23) |
| nucleotides (available for above) |
27 sequences @ 324 bp (ave. pairwise identity: 0.40) |
New Hampshire format (total tree length: 13.88) |
|
amino acids, restricted set (corresp. to available nt seqs) |
27 sequences @ 108 aa (ave. pairwise identity: 0.27) |
New Hampshire format (total tree length: 21.23) |