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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07686 phylogeny
for nucleotide alignment


 
((((((MOX2R_MOUSE/37-147,Q9UM44_HUMAN/224-330),((Q7ZT04_PAROL/16-125,Q9IAL5_ONCMY/18-128),((((((Q7SYU1_XENLA/29-142,Q96I69_HUMAN/20-127),(VPREB_HUMAN/20-126,Q8WUK3_HUMAN/19-134)),(((((Q8BVF6_MOUSE/29-142,Q8HY15_LEMCA/28-144),Q9Y4A4_HUMAN/2-99),Q96NY8_HUMAN/31-146),(CD7_HUMAN/26-132,Q8N4F1_HUMAN/21-140)),(((Q8N9I7_HUMAN/12-126,((Q9UEL6_HUMAN/11-129,(Q14902_HUMAN/29-147,Q8AVM3_XENLA/18-133)),(EVA1_HUMAN/26-143,Q8JG36_BRARE/25-143))),SCN2B_HUMAN/29-147),((Q91664_XENLA/19-133,Q9YGV5_CHICK/21-136),((Q90Y50_BRARE/24-142,Q9TU80_CANFA/19-138),((CSPG2_MOUSE/23-147,GPA33_HUMAN/21-138),(Q7ZX17_XENLA/48-164,(((O35441_MOUSE/11-124,Q8C0U8_MOUSE/32-144),Q8BIN0_MOUSE/27-143),Q31407_CHICK/35-147)))))))),((((Q8BRU3_MOUSE/19-124,Q8K249_MOUSE/15-124),(Q8SQ83_TRIVU/18-141,Q8WWV6_HUMAN/61-171)),(((Q7T0R1_XENLA/20-133,((Q8WU38_HUMAN/20-142,Q9UL73_HUMAN/1-118),(HV07_MOUSE/20-138,Q7SZQ3_BRARE/20-136))),((SHPS1_BOVIN/33-145,PT1L2_HUMAN/29-140),(Q8I9K2_BRAFL/162-294,Q8I9N1_BRAFL/160-289))),((Q8AXH5_GINCI/1-112,Q90XX1_9CHON/18-131),(Q62859_RAT/37-152,(SIGL5_HUMAN/22-140,Q96H15_HUMAN/19-128))))),(((((Q9IAY7_9PERC/141-244,(Q8AXL6_ONCMY/152-263,(Q9IB02_9PERC/139-240,Q8UV83_BRARE/140-247))),(((((Q9IB03_9PERC/22-135,(Q9IAY8_9PERC/26-138,Q9IB07_9PERC/31-143)),(Q9IB05_9PERC/26-139,((Q9IB09_9PERC/22-136,Q9IB01_9PERC/22-133),Q9IB00_9PERC/22-134))),((Q8AXL7_ONCMY/28-140,Q8UUG3_ICTPU/19-132),Q9IB02_9PERC/21-132)),(Q8AXL6_ONCMY/38-146,(Q8AXL4_ONCMY/25-129,((Q8AW68_BRARE/21-133,(Q8AXL5_ONCMY/19-136,Q8UVB2_BRARE/21-134)),(Q8UV53_BRARE/4-116,(Q8UV39_BRARE/17-127,Q8UWK1_ICTPU/19-130)))))),(Q8UWK3_ICTPU/16-124,Q8UWK6_ICTPU/20-131))),TVA2_HUMAN/27-138),(Q8C254_MOUSE/20-122,Q9JKE2_MOUSE/21-134)),((((TVB1_MOUSE/20-132,TCB_FLV/29-144),Q8K1Z5_MOUSE/7-121),((Q9I9J9_AMBME/28-143,(Q9R041_MERUN/19-134,(CD8B_FELCA/19-135,CD8B_SAISC/19-134))),(Q8TAW8_HUMAN/21-132,((SCN3B_MOUSE/24-143,Q8AV16_CHICK/40-142),O70153_RAT/43-142)))),TVB6_MOUSE/21-136)))),Q9BRK3_HUMAN/165-289),(PDCD1_MOUSE/34-145,Q7PUU3_ANOGA/24-122)))),((((Q61350_MOUSE/1-141,(Q61349_MOUSE/1-141,Q61351_MOUSE/1-141)),Q63093_RAT/1-141),(((O75871_HUMAN/1-141,P78448_HUMAN/1-141),O75296_HUMAN/1-141),P97268_CAVPO/1-141)),Q9R121_RAT/1-135)),((CD2_HUMAN/1-134,Q8WNV8_FELCA/1-125),CD2_HORSE/1-129)),CD2_RAT/9-127),CD2_MOUSE/9-128,Q9R201_MOUSE/9-128);
((((((MOX2R_MOUSE/37-147:0.73413,Q9UM44_HUMAN/224-330:0.62855):0.20391,((Q7ZT04_PAROL/16-125:0.34478,Q9IAL5_ONCMY/18-128:0.31289):0.36882,((((((Q7SYU1_XENLA/29-142:0.49517,Q96I69_HUMAN/20-127:0.28666):0.09029,(VPREB_HUMAN/20-126:0.45148,Q8WUK3_HUMAN/19-134:0.24303):0.13179):0.26727,(((((Q8BVF6_MOUSE/29-142:0.45813,Q8HY15_LEMCA/28-144:0.34955):0.17191,Q9Y4A4_HUMAN/2-99:0.61907):0.09998,Q96NY8_HUMAN/31-146:0.61193):0.13798,(CD7_HUMAN/26-132:0.35397,Q8N4F1_HUMAN/21-140:0.58060):0.07158):0.08728,(((Q8N9I7_HUMAN/12-126:0.63225,((Q9UEL6_HUMAN/11-129:0.30550,(Q14902_HUMAN/29-147:0.32283,Q8AVM3_XENLA/18-133:0.63297):0.11105):0.15480,(EVA1_HUMAN/26-143:0.27855,Q8JG36_BRARE/25-143:0.41243):0.13265):0.14979):0.12894,SCN2B_HUMAN/29-147:0.39193):0.09439,((Q91664_XENLA/19-133:0.29989,Q9YGV5_CHICK/21-136:0.33111):0.30338,((Q90Y50_BRARE/24-142:0.33657,Q9TU80_CANFA/19-138:0.28730):0.26512,((CSPG2_MOUSE/23-147:0.71218,GPA33_HUMAN/21-138:0.50828):0.09207,(Q7ZX17_XENLA/48-164:0.46471,(((O35441_MOUSE/11-124:0.44956,Q8C0U8_MOUSE/32-144:0.25006):0.21654,Q8BIN0_MOUSE/27-143:0.53457):0.11567,Q31407_CHICK/35-147:0.31265):0.29153):0.06957):0.15927):0.09378):0.14168):0.17764):0.11372):0.05148,((((Q8BRU3_MOUSE/19-124:0.28975,Q8K249_MOUSE/15-124:0.35629):0.26264,(Q8SQ83_TRIVU/18-141:0.37363,Q8WWV6_HUMAN/61-171:0.38669):0.22568):0.32410,(((Q7T0R1_XENLA/20-133:0.61638,((Q8WU38_HUMAN/20-142:0.20703,Q9UL73_HUMAN/1-118:0.25503):0.05863,(HV07_MOUSE/20-138:0.26870,Q7SZQ3_BRARE/20-136:0.42204):0.05401):0.07824):0.22600,((SHPS1_BOVIN/33-145:0.18194,PT1L2_HUMAN/29-140:0.33980):0.25500,(Q8I9K2_BRAFL/162-294:0.29370,Q8I9N1_BRAFL/160-289:0.33806):0.40663):0.16286):0.08735,((Q8AXH5_GINCI/1-112:0.15594,Q90XX1_9CHON/18-131:0.18479):0.54489,(Q62859_RAT/37-152:0.88490,(SIGL5_HUMAN/22-140:0.34517,Q96H15_HUMAN/19-128:0.67611):0.22663):0.04125):0.07645):0.06869):0.09309,(((((Q9IAY7_9PERC/141-244:0.24500,(Q8AXL6_ONCMY/152-263:0.16900,(Q9IB02_9PERC/139-240:0.61011,Q8UV83_BRARE/140-247:0.43804):0.12362):0.05625):0.33010,(((((Q9IB03_9PERC/22-135:0.43345,(Q9IAY8_9PERC/26-138:0.14216,Q9IB07_9PERC/31-143:0.20726):0.24411):0.06197,(Q9IB05_9PERC/26-139:0.37234,((Q9IB09_9PERC/22-136:0.37131,Q9IB01_9PERC/22-133:0.12967):0.04691,Q9IB00_9PERC/22-134:0.16598):0.25398):0.04810):0.08529,((Q8AXL7_ONCMY/28-140:0.22622,Q8UUG3_ICTPU/19-132:0.32562):0.05420,Q9IB02_9PERC/21-132:0.47566):0.05709):0.14202,(Q8AXL6_ONCMY/38-146:0.57421,(Q8AXL4_ONCMY/25-129:0.51589,((Q8AW68_BRARE/21-133:0.42666,(Q8AXL5_ONCMY/19-136:0.28986,Q8UVB2_BRARE/21-134:0.40399):0.09181):0.07175,(Q8UV53_BRARE/4-116:0.40629,(Q8UV39_BRARE/17-127:0.26116,Q8UWK1_ICTPU/19-130:0.34246):0.07018):0.06276):0.10197):0.07834):0.07499):0.10199,(Q8UWK3_ICTPU/16-124:0.23646,Q8UWK6_ICTPU/20-131:0.20190):0.35291):0.19035):0.05538,TVA2_HUMAN/27-138:0.54039):0.22609,(Q8C254_MOUSE/20-122:0.37694,Q9JKE2_MOUSE/21-134:0.61775):0.28203):0.05794,((((TVB1_MOUSE/20-132:0.46450,TCB_FLV/29-144:0.20356):0.29678,Q8K1Z5_MOUSE/7-121:0.47435):0.14986,((Q9I9J9_AMBME/28-143:0.45281,(Q9R041_MERUN/19-134:0.21883,(CD8B_FELCA/19-135:0.15617,CD8B_SAISC/19-134:0.13083):0.12013):0.33829):0.24738,(Q8TAW8_HUMAN/21-132:0.66683,((SCN3B_MOUSE/24-143:0.70789,Q8AV16_CHICK/40-142:0.45053):0.23603,O70153_RAT/43-142:0.37168):0.16696):0.06479):0.10209):0.07370,TVB6_MOUSE/21-136:0.92665):0.05071):0.07081):0.08295):0.11035,Q9BRK3_HUMAN/165-289:0.89279):0.09086,(PDCD1_MOUSE/34-145:0.40175,Q7PUU3_ANOGA/24-122:0.75368):0.15913):0.20200):0.12320):0.45040,((((Q61350_MOUSE/1-141:0.07006,(Q61349_MOUSE/1-141:0.13258,Q61351_MOUSE/1-141:0.02345):0.03454):0.05737,Q63093_RAT/1-141:0.18098):0.10476,(((O75871_HUMAN/1-141:0.17637,P78448_HUMAN/1-141:0.13711):0.03615,O75296_HUMAN/1-141:0.17471):0.02937,P97268_CAVPO/1-141:0.40169):0.08086):0.20279,Q9R121_RAT/1-135:0.23092):0.27763):0.64081,((CD2_HUMAN/1-134:0.13497,Q8WNV8_FELCA/1-125:0.22354):0.02696,CD2_HORSE/1-129:0.13642):0.17977):0.18116,CD2_RAT/9-127:0.04815):0.10073,CD2_MOUSE/9-128:0.00000,Q9R201_MOUSE/9-128:0.00360);