EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF07686 - V-set)
Immunoglobulin V-set domain
(Pfam reference: accession no. PF07686)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
121 sequences @ 200 aa
(ave. pairwise identity: 0.21)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 99.01)
nucleotides
(available for above)
107 sequences @ 600 bp
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 55.30)
amino acids, restricted set
(corresp. to available nt seqs)
107 sequences @ 200 aa
(ave. pairwise identity: 0.20)
New Hampshire format
(total tree length: 90.03)