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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07683 phylogeny
for restricted amino acid alignment


 
(((((((((((Q89DY4_BRAJA/214-306,Q8D644_VIBVU/232-325),(((((Q7WTG9_ECOLI/250-370,Q83W94_ECOLI/252-372),((Y109_MYCBO/237-351,Q82EH0_STRAW/305-421),((Q869Q0_DICDI/302-420,((((Q8UB36_AGRT5/258-374,Q8FUU8_BRUSU/259-375),(Q87CM8_XYLFT/264-417,Q8PDS8_XANCP/263-416)),Q7UHN6_RHOBA/266-386),(((P47K_PSECL/262-379,Q8GIW1_RHOER/253-370),((Q87TZ1_PSESM/256-373,Q88C22_PSEPK/256-373),Q9HT39_PSEAE/256-373)),(Q8Y3D5_RALSO/252-376,Q9ZF88_BURPS/275-396)))),(((P94400_BACSU/259-374,Q8EL03_OCEIH/260-375),(Q8CQR9_STAEP/260-375,Q8NY30_STAAW/260-375)),(Q81F90_BACCR/256-371,(Q8EL02_OCEIH/255-370,Q9KBY4_BACHD/257-372)))))),Q8NSI1_CORGL/260-351),(Q7WC50_BORPA/236-324,(O50509_STRCO/232-332,Q82KH9_STRAW/232-323))),(Q7NER1_GLOVI/257-344,((((Q7VAF5_PROMA/265-353,Q8YN48_ANASP/264-352),Q7U5B2_SYNPX/274-362),(Q7V2I6_PROMP/269-357,Q7VD94_PROMA/256-344)),((P74756_SYNY3/281-369,Q8YXW4_ANASP/273-361),Q8DGP0_SYNEL/261-349))))),((((((((Q81EG0_BACCR/224-318,Q8EKZ9_OCEIH/228-321),(Q8KRT6_XENNE/234-328,((Q87WB7_PSESM/230-324,Q88E29_PSEPK/227-321),Q9HVI5_PSEAE/237-331))),(Q7VUK2_BORPE/275-369,Q8Y3D3_RALSO/268-361)),((((Q7W1L1_BORPA/245-338,(Q8FV62_BRUSU/280-373,(Q8U7E7_AGRT5/279-372,Q98CG8_RHILO/341-434))),(Q89CM9_BRAJA/252-346,Q92L97_RHIME/228-322)),Q9ABB0_CAUCR/270-364),(Q92X29_RHIME/248-341,(((Q7NN79_GLOVI/354-448,(Q7U3F0_SYNPX/366-459,Q7V153_PROMP/358-451)),Q8YW65_ANASP/228-322),((Q7XA35_SOLBU/327-429,Q7XPT4_ORYSA/316-410),(Q9FUB1_ARATH/150-244,Q9M8L6_ARATH/349-443)))))),Q9RRS7_DEIRA/226-316),((Q7XAM3_ORYSA/267-363,Q9FZD7_ARATH/266-354),(Q7TSA8_MOUSE/150-253,Q7Z652_HUMAN/238-341))),((((O25082_HELPY/220-310,Q7VYR9_BORPE/237-331),Q87XI0_PSESM/229-323),(Q7WB77_BORPA/233-322,Q82Z69_ENTFA/229-319)),(Q8UB33_AGRT5/279-374,(Q8U9U2_AGRT5/290-386,(Q8FY54_BRUSU/268-363,Q98FX4_RHILO/257-352))))),((Q7NXR5_CHRVO/273-363,Q8XS64_RALSO/274-362),((Q7VC91_PROMA/262-348,((Q7U759_SYNPX/266-363,Q7V818_PROMM/271-363),Q7V1S7_PROMP/247-341)),((Q8DIG4_SYNEL/250-338,(Q55822_SYNY3/261-352,(Q7NPD2_GLOVI/243-335,((((O30787_RHOCA/253-346,Q89Q68_BRAJA/253-342),(Q8UBP6_AGRT5/254-344,Q98KQ2_RHILO/254-345)),(COBW_PSEDE/260-353,Q8G009_BRUSU/256-349)),((Q880K5_PSESM/261-352,Q88H57_PSEPK/262-353),Q9HZQ2_PSEAE/283-374))))),Q8YRQ2_ANASP/255-346))))),(((Q896Q7_CLOTE/255-341,Q8XPC8_CLOPE/223-307),((Q9KCQ0_BACHD/233-318,((Q81EP2_BACCR/215-300,(Q8CQ26_STAEP/220-306,Q8NXQ1_STAAW/220-306)),Q9KFV5_BACHD/223-310)),(Q8CQD6_STAEP/212-293,Q8NUP4_STAAW/215-294))),O74310_SCHPO/307-411)),(Q8RFD0_FUSNN/202-292,YN8H_YEAST/332-428)),(Q7NTI7_CHRVO/197-281,Q9JU67_NEIMA/221-307)),(Q87TZ4_PSESM/239-322,Q88C24_PSEPK/238-321)),(Q87IL7_VIBPA/241-324,Q8EGT9_SHEON/278-363)),Q7UHN3_RHOBA/253-337),Q8ZGL2_YERPE/241-322),YEIR_ECOLI/240-323,Q8XFI7_SALTI/240-319);
(((((((((((Q89DY4_BRAJA/214-306:0.97226,Q8D644_VIBVU/232-325:0.62292):0.27596,(((((Q7WTG9_ECOLI/250-370:0.15818,Q83W94_ECOLI/252-372:0.22141):0.91325,((Y109_MYCBO/237-351:0.78591,Q82EH0_STRAW/305-421:0.65572):0.30920,((Q869Q0_DICDI/302-420:0.56992,((((Q8UB36_AGRT5/258-374:0.21624,Q8FUU8_BRUSU/259-375:0.12192):0.30448,(Q87CM8_XYLFT/264-417:0.12623,Q8PDS8_XANCP/263-416:0.15712):0.25692):0.15117,Q7UHN6_RHOBA/266-386:0.53220):0.05091,(((P47K_PSECL/262-379:0.34588,Q8GIW1_RHOER/253-370:0.24322):0.22195,((Q87TZ1_PSESM/256-373:0.17612,Q88C22_PSEPK/256-373:0.17799):0.09891,Q9HT39_PSEAE/256-373:0.14287):0.07756):0.23484,(Q8Y3D5_RALSO/252-376:0.26768,Q9ZF88_BURPS/275-396:0.26248):0.03002):0.20566):0.16228):0.05081,(((P94400_BACSU/259-374:0.07135,Q8EL03_OCEIH/260-375:0.31308):0.07662,(Q8CQR9_STAEP/260-375:0.12949,Q8NY30_STAAW/260-375:0.07670):0.20608):0.26019,(Q81F90_BACCR/256-371:0.18698,(Q8EL02_OCEIH/255-370:0.25201,Q9KBY4_BACHD/257-372:0.17586):0.10299):0.12268):0.17867):0.13899):0.04737):0.14385,Q8NSI1_CORGL/260-351:0.81223):0.48403,(Q7WC50_BORPA/236-324:1.27156,(O50509_STRCO/232-332:0.32736,Q82KH9_STRAW/232-323:0.03816):0.68704):0.10073):0.08532,(Q7NER1_GLOVI/257-344:0.44365,((((Q7VAF5_PROMA/265-353:0.26216,Q8YN48_ANASP/264-352:0.46146):0.08492,Q7U5B2_SYNPX/274-362:0.16152):0.00000,(Q7V2I6_PROMP/269-357:0.20481,Q7VD94_PROMA/256-344:0.18699):0.12121):0.03212,((P74756_SYNY3/281-369:0.19780,Q8YXW4_ANASP/273-361:0.14079):0.08020,Q8DGP0_SYNEL/261-349:0.11766):0.03729):0.34937):0.16197):0.19627):0.20031,((((((((Q81EG0_BACCR/224-318:0.23823,Q8EKZ9_OCEIH/228-321:0.49285):0.20304,(Q8KRT6_XENNE/234-328:0.54100,((Q87WB7_PSESM/230-324:0.10455,Q88E29_PSEPK/227-321:0.18353):0.17438,Q9HVI5_PSEAE/237-331:0.09942):0.17408):0.28430):0.07193,(Q7VUK2_BORPE/275-369:0.30857,Q8Y3D3_RALSO/268-361:0.34252):0.42884):0.15701,((((Q7W1L1_BORPA/245-338:0.35205,(Q8FV62_BRUSU/280-373:0.12720,(Q8U7E7_AGRT5/279-372:0.14968,Q98CG8_RHILO/341-434:0.08965):0.09013):0.08965):0.10661,(Q89CM9_BRAJA/252-346:0.28345,Q92L97_RHIME/228-322:0.46385):0.06314):0.14510,Q9ABB0_CAUCR/270-364:0.47154):0.16801,(Q92X29_RHIME/248-341:0.67389,(((Q7NN79_GLOVI/354-448:0.28881,(Q7U3F0_SYNPX/366-459:0.15424,Q7V153_PROMP/358-451:0.22929):0.28498):0.15609,Q8YW65_ANASP/228-322:0.25845):0.05149,((Q7XA35_SOLBU/327-429:0.08717,Q7XPT4_ORYSA/316-410:0.15039):0.27029,(Q9FUB1_ARATH/150-244:0.11169,Q9M8L6_ARATH/349-443:0.11236):0.28673):0.14753):0.07336):0.12349):0.08710):0.09866,Q9RRS7_DEIRA/226-316:0.87237):0.05486,((Q7XAM3_ORYSA/267-363:0.36049,Q9FZD7_ARATH/266-354:0.20746):0.68560,(Q7TSA8_MOUSE/150-253:0.12678,Q7Z652_HUMAN/238-341:0.10742):0.53833):0.36118):0.05508,((((O25082_HELPY/220-310:0.94306,Q7VYR9_BORPE/237-331:1.01810):0.03508,Q87XI0_PSESM/229-323:0.55859):0.22185,(Q7WB77_BORPA/233-322:0.81471,Q82Z69_ENTFA/229-319:0.86433):0.46046):0.09061,(Q8UB33_AGRT5/279-374:0.71526,(Q8U9U2_AGRT5/290-386:0.31677,(Q8FY54_BRUSU/268-363:0.21628,Q98FX4_RHILO/257-352:0.16887):0.07762):0.20395):0.32799):0.47487):0.15251,((Q7NXR5_CHRVO/273-363:0.19819,Q8XS64_RALSO/274-362:0.42381):1.03547,((Q7VC91_PROMA/262-348:0.48473,((Q7U759_SYNPX/266-363:0.28506,Q7V818_PROMM/271-363:0.34798):0.27543,Q7V1S7_PROMP/247-341:0.68603):0.06919):0.96865,((Q8DIG4_SYNEL/250-338:0.50293,(Q55822_SYNY3/261-352:0.36287,(Q7NPD2_GLOVI/243-335:0.50511,((((O30787_RHOCA/253-346:0.10186,Q89Q68_BRAJA/253-342:0.23326):0.20851,(Q8UBP6_AGRT5/254-344:0.15239,Q98KQ2_RHILO/254-345:0.29764):0.23445):0.21556,(COBW_PSEDE/260-353:0.20747,Q8G009_BRUSU/256-349:0.19986):0.13922):0.16325,((Q880K5_PSESM/261-352:0.15295,Q88H57_PSEPK/262-353:0.13632):0.17301,Q9HZQ2_PSEAE/283-374:0.17822):0.20954):0.24426):0.09489):0.06752):0.08816,Q8YRQ2_ANASP/255-346:0.26245):0.13135):0.13766):0.15148):0.17168):0.23881,(((Q896Q7_CLOTE/255-341:0.41425,Q8XPC8_CLOPE/223-307:0.47893):0.72240,((Q9KCQ0_BACHD/233-318:0.98793,((Q81EP2_BACCR/215-300:0.39066,(Q8CQ26_STAEP/220-306:0.22665,Q8NXQ1_STAAW/220-306:0.21868):0.68815):0.19379,Q9KFV5_BACHD/223-310:0.80150):0.22363):0.19166,(Q8CQD6_STAEP/212-293:0.39595,Q8NUP4_STAAW/215-294:0.62608):0.43521):0.20929):0.09137,O74310_SCHPO/307-411:1.39798):0.11824):0.14878,(Q8RFD0_FUSNN/202-292:0.93793,YN8H_YEAST/332-428:1.34302):0.09797):0.79048,(Q7NTI7_CHRVO/197-281:0.26742,Q9JU67_NEIMA/221-307:0.24259):0.39773):0.11079,(Q87TZ4_PSESM/239-322:0.44025,Q88C24_PSEPK/238-321:0.32508):0.51853):0.19698,(Q87IL7_VIBPA/241-324:0.70454,Q8EGT9_SHEON/278-363:0.34279):0.20051):0.27513,Q7UHN3_RHOBA/253-337:0.58270):0.74996,Q8ZGL2_YERPE/241-322:0.23584):0.14770,YEIR_ECOLI/240-323:0.06206,Q8XFI7_SALTI/240-319:0.08611);