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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07683 phylogeny
for amino acid alignment


 
(((((((((((Q89DY4_BRAJA/214-306,Q8D644_VIBVU/232-325),(((((Q7WTG9_ECOLI/250-370,Q83W94_ECOLI/252-372),((Y109_MYCBO/237-351,Q82EH0_STRAW/305-421),((Q869Q0_DICDI/302-420,((((Q8UB36_AGRT5/258-374,Q8FUU8_BRUSU/259-375),(Q87CM8_XYLFT/264-417,Q8PDS8_XANCP/263-416)),Q7UHN6_RHOBA/266-386),(((P47K_PSECL/262-379,Q8GIW1_RHOER/253-370),((Q87TZ1_PSESM/256-373,Q88C22_PSEPK/256-373),Q9HT39_PSEAE/256-373)),(Q8Y3D5_RALSO/252-376,Q9ZF88_BURPS/275-396)))),(((P94400_BACSU/259-374,Q8EL03_OCEIH/260-375),(Q8CQR9_STAEP/260-375,Q8NY30_STAAW/260-375)),(Q81F90_BACCR/256-371,(Q8EL02_OCEIH/255-370,Q9KBY4_BACHD/257-372)))))),Q8NSI1_CORGL/260-351),(Q7WC50_BORPA/236-324,(O50509_STRCO/232-332,Q82KH9_STRAW/232-323))),(Q7NER1_GLOVI/257-344,((((Q7VAF5_PROMA/265-353,Q8YN48_ANASP/264-352),Q7U5B2_SYNPX/274-362),(Q7V2I6_PROMP/269-357,Q7VD94_PROMA/256-344)),((P74756_SYNY3/281-369,Q8YXW4_ANASP/273-361),Q8DGP0_SYNEL/261-349))))),((((((((Q7VUK2_BORPE/275-369,Q8Y3D3_RALSO/268-361),((YJIA_ECOLI/224-317,Q8KRT6_XENNE/234-328),((Q87WB7_PSESM/230-324,Q88E29_PSEPK/227-321),Q9HVI5_PSEAE/237-331))),(Q81EG0_BACCR/224-318,Q8EKZ9_OCEIH/228-321)),((((Q7W1L1_BORPA/245-338,(Q8FV62_BRUSU/280-373,(Q8U7E7_AGRT5/279-372,Q98CG8_RHILO/341-434))),(Q89CM9_BRAJA/252-346,Q92L97_RHIME/228-322)),Q9ABB0_CAUCR/270-364),(Q92X29_RHIME/248-341,(((Q7NN79_GLOVI/354-448,(Q7U3F0_SYNPX/366-459,Q7V153_PROMP/358-451)),Q8YW65_ANASP/228-322),((Q7XA35_SOLBU/327-429,Q7XPT4_ORYSA/316-410),(Q9FUB1_ARATH/150-244,Q9M8L6_ARATH/349-443)))))),Q9RRS7_DEIRA/226-316),((Q7XAM3_ORYSA/267-363,Q9FZD7_ARATH/266-354),(Q7TSA8_MOUSE/150-253,Q7Z652_HUMAN/238-341))),((((O25082_HELPY/220-310,Q7VYR9_BORPE/237-331),Q87XI0_PSESM/229-323),(Q7WB77_BORPA/233-322,Q82Z69_ENTFA/229-319)),(Q8UB33_AGRT5/279-374,(Q8U9U2_AGRT5/290-386,(Q8FY54_BRUSU/268-363,Q98FX4_RHILO/257-352))))),((Q7NXR5_CHRVO/273-363,Q8XS64_RALSO/274-362),((Q7VC91_PROMA/262-348,((Q7U759_SYNPX/266-363,Q7V818_PROMM/271-363),Q7V1S7_PROMP/247-341)),((Q8DIG4_SYNEL/250-338,(Q55822_SYNY3/261-352,(Q7NPD2_GLOVI/243-335,((((O30787_RHOCA/253-346,Q89Q68_BRAJA/253-342),(Q8UBP6_AGRT5/254-344,Q98KQ2_RHILO/254-345)),(COBW_PSEDE/260-353,Q8G009_BRUSU/256-349)),((Q880K5_PSESM/261-352,Q88H57_PSEPK/262-353),Q9HZQ2_PSEAE/283-374))))),Q8YRQ2_ANASP/255-346))))),(((Q896Q7_CLOTE/255-341,Q8XPC8_CLOPE/223-307),((Q9KCQ0_BACHD/233-318,((Q81EP2_BACCR/215-300,(Q8CQ26_STAEP/220-306,Q8NXQ1_STAAW/220-306)),Q9KFV5_BACHD/223-310)),(Q8CQD6_STAEP/212-293,Q8NUP4_STAAW/215-294))),O74310_SCHPO/307-411)),(Q8RFD0_FUSNN/202-292,YN8H_YEAST/332-428)),(Q7NTI7_CHRVO/197-281,Q9JU67_NEIMA/221-307)),(Q87TZ4_PSESM/239-322,Q88C24_PSEPK/238-321)),(Q87IL7_VIBPA/241-324,Q8EGT9_SHEON/278-363)),Q7UHN3_RHOBA/253-337),Q8ZGL2_YERPE/241-322),YEIR_ECOLI/240-323,Q8XFI7_SALTI/240-319);
(((((((((((Q89DY4_BRAJA/214-306:0.97299,Q8D644_VIBVU/232-325:0.62209):0.27470,(((((Q7WTG9_ECOLI/250-370:0.15876,Q83W94_ECOLI/252-372:0.22084):0.91204,((Y109_MYCBO/237-351:0.78582,Q82EH0_STRAW/305-421:0.65636):0.30904,((Q869Q0_DICDI/302-420:0.56957,((((Q8UB36_AGRT5/258-374:0.21618,Q8FUU8_BRUSU/259-375:0.12199):0.30458,(Q87CM8_XYLFT/264-417:0.12641,Q8PDS8_XANCP/263-416:0.15699):0.25690):0.15129,Q7UHN6_RHOBA/266-386:0.53234):0.05107,(((P47K_PSECL/262-379:0.34594,Q8GIW1_RHOER/253-370:0.24333):0.22211,((Q87TZ1_PSESM/256-373:0.17621,Q88C22_PSEPK/256-373:0.17796):0.09893,Q9HT39_PSEAE/256-373:0.14286):0.07752):0.23477,(Q8Y3D5_RALSO/252-376:0.26779,Q9ZF88_BURPS/275-396:0.26250):0.03011):0.20545):0.16228):0.04998,(((P94400_BACSU/259-374:0.07124,Q8EL03_OCEIH/260-375:0.31330):0.07667,(Q8CQR9_STAEP/260-375:0.12953,Q8NY30_STAAW/260-375:0.07671):0.20614):0.26019,(Q81F90_BACCR/256-371:0.18700,(Q8EL02_OCEIH/255-370:0.25208,Q9KBY4_BACHD/257-372:0.17592):0.10306):0.12271):0.18027):0.13930):0.04767):0.14511,Q8NSI1_CORGL/260-351:0.81071):0.48408,(Q7WC50_BORPA/236-324:1.27352,(O50509_STRCO/232-332:0.32666,Q82KH9_STRAW/232-323:0.03906):0.68767):0.10051):0.08709,(Q7NER1_GLOVI/257-344:0.44575,((((Q7VAF5_PROMA/265-353:0.26218,Q8YN48_ANASP/264-352:0.46157):0.08494,Q7U5B2_SYNPX/274-362:0.16149):0.00000,(Q7V2I6_PROMP/269-357:0.20486,Q7VD94_PROMA/256-344:0.18694):0.12125):0.03208,((P74756_SYNY3/281-369:0.19783,Q8YXW4_ANASP/273-361:0.14080):0.08022,Q8DGP0_SYNEL/261-349:0.11766):0.03736):0.34756):0.16196):0.19939):0.20881,((((((((Q7VUK2_BORPE/275-369:0.34179,Q8Y3D3_RALSO/268-361:0.31864):0.41369,((YJIA_ECOLI/224-317:0.31465,Q8KRT6_XENNE/234-328:0.23931):0.33765,((Q87WB7_PSESM/230-324:0.10848,Q88E29_PSEPK/227-321:0.17938):0.17138,Q9HVI5_PSEAE/237-331:0.10865):0.17926):0.22839):0.09403,(Q81EG0_BACCR/224-318:0.26440,Q8EKZ9_OCEIH/228-321:0.48323):0.19432):0.15616,((((Q7W1L1_BORPA/245-338:0.34898,(Q8FV62_BRUSU/280-373:0.12453,(Q8U7E7_AGRT5/279-372:0.14897,Q98CG8_RHILO/341-434:0.09070):0.09231):0.09119):0.10712,(Q89CM9_BRAJA/252-346:0.28629,Q92L97_RHIME/228-322:0.46205):0.06407):0.14038,Q9ABB0_CAUCR/270-364:0.47178):0.19216,(Q92X29_RHIME/248-341:0.68324,(((Q7NN79_GLOVI/354-448:0.28945,(Q7U3F0_SYNPX/366-459:0.15442,Q7V153_PROMP/358-451:0.22892):0.28445):0.15553,Q8YW65_ANASP/228-322:0.25640):0.06132,((Q7XA35_SOLBU/327-429:0.08821,Q7XPT4_ORYSA/316-410:0.14944):0.27106,(Q9FUB1_ARATH/150-244:0.11322,Q9M8L6_ARATH/349-443:0.11099):0.28562):0.14258):0.07996):0.10352):0.09098):0.09023,Q9RRS7_DEIRA/226-316:0.88499):0.05574,((Q7XAM3_ORYSA/267-363:0.35087,Q9FZD7_ARATH/266-354:0.21874):0.66087,(Q7TSA8_MOUSE/150-253:0.12670,Q7Z652_HUMAN/238-341:0.10753):0.55685):0.35517):0.05729,((((O25082_HELPY/220-310:0.94521,Q7VYR9_BORPE/237-331:1.01705):0.03530,Q87XI0_PSESM/229-323:0.56056):0.22423,(Q7WB77_BORPA/233-322:0.82205,Q82Z69_ENTFA/229-319:0.85776):0.45630):0.08476,(Q8UB33_AGRT5/279-374:0.71641,(Q8U9U2_AGRT5/290-386:0.31736,(Q8FY54_BRUSU/268-363:0.21619,Q98FX4_RHILO/257-352:0.16900):0.07709):0.20228):0.33249):0.49319):0.13492,((Q7NXR5_CHRVO/273-363:0.20043,Q8XS64_RALSO/274-362:0.42151):1.03697,((Q7VC91_PROMA/262-348:0.48069,((Q7U759_SYNPX/266-363:0.28494,Q7V818_PROMM/271-363:0.34836):0.27604,Q7V1S7_PROMP/247-341:0.68627):0.07237):0.96863,((Q8DIG4_SYNEL/250-338:0.50300,(Q55822_SYNY3/261-352:0.36158,(Q7NPD2_GLOVI/243-335:0.50536,((((O30787_RHOCA/253-346:0.10161,Q89Q68_BRAJA/253-342:0.23354):0.20821,(Q8UBP6_AGRT5/254-344:0.15243,Q98KQ2_RHILO/254-345:0.29767):0.23492):0.21561,(COBW_PSEDE/260-353:0.20721,Q8G009_BRUSU/256-349:0.20010):0.13905):0.16270,((Q880K5_PSESM/261-352:0.15278,Q88H57_PSEPK/262-353:0.13652):0.17294,Q9HZQ2_PSEAE/283-374:0.17838):0.21025):0.24376):0.09573):0.06771):0.08902,Q8YRQ2_ANASP/255-346:0.26233):0.13253):0.13725):0.15862):0.16581):0.23548,(((Q896Q7_CLOTE/255-341:0.40877,Q8XPC8_CLOPE/223-307:0.48510):0.72746,((Q9KCQ0_BACHD/233-318:0.99249,((Q81EP2_BACCR/215-300:0.38503,(Q8CQ26_STAEP/220-306:0.22723,Q8NXQ1_STAAW/220-306:0.21820):0.69359):0.19288,Q9KFV5_BACHD/223-310:0.80687):0.21832):0.19472,(Q8CQD6_STAEP/212-293:0.39755,Q8NUP4_STAAW/215-294:0.62418):0.43193):0.20995):0.09232,O74310_SCHPO/307-411:1.39095):0.11384):0.14947,(Q8RFD0_FUSNN/202-292:0.93210,YN8H_YEAST/332-428:1.33997):0.09321):0.80289,(Q7NTI7_CHRVO/197-281:0.26686,Q9JU67_NEIMA/221-307:0.24357):0.40133):0.10801,(Q87TZ4_PSESM/239-322:0.43916,Q88C24_PSEPK/238-321:0.32643):0.51850):0.19744,(Q87IL7_VIBPA/241-324:0.70440,Q8EGT9_SHEON/278-363:0.34329):0.20143):0.27477,Q7UHN3_RHOBA/253-337:0.58397):0.74844,Q8ZGL2_YERPE/241-322:0.23581):0.14778,YEIR_ECOLI/240-323:0.06206,Q8XFI7_SALTI/240-319:0.08612);