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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07681 phylogeny
for amino acid alignment


 
((((Q82HN4_STRAW/24-151,((((Q8GA66_ECOLI/8-124,(YPHA_ECOLI/16-132,(Q8XWH4_RALSO/12-128,Q88G88_PSEPK/13-129))),(Q92TK3_RHIME/11-122,(((((Q7N096_PHOLL/8-118,YQJF_ECOLI/8-117),Q8CZQ7_YERPE/13-123),Q82UE4_NITEU/22-131),Q98JF9_RHILO/23-132),(Q8FX91_BRUSU/12-123,(((Q8UHK0_AGRT5/23-147,Q92SD1_RHIME/6-130),Q983U8_RHILO/8-125),Q983U6_RHILO/19-130))))),(((Q8KW46_9RHOB/66-182,(Q9HWH6_PSEAE/14-130,((Q8U4Y0_AGRT5/25-140,Q92Y87_RHIME/25-140),Q89EW4_BRAJA/19-135))),Q9KYL5_STRCO/4-131),(Q89SK7_BRAJA/66-183,(Q83CN9_COXBU/6-122,(((Q7V7V3_PROMM/10-111,Q7VBT6_PROMA/9-119),(Q984Q4_RHILO/6-113,Q98K48_RHILO/27-143)),(Q89MP6_BRAJA/4-138,Q8YSN3_ANASP/6-117)))))),Q98JU3_RHILO/13-127)),((Q8EZJ9_LEPIN/12-124,((Q8FR06_COREF/10-123,Q9RTC4_DEIRA/8-120),(Q8FSC2_COREF/11-124,Q8NT59_CORGL/10-123))),(((YFID_BACSU/8-114,(Q812S4_BACCR/6-118,Q9RC47_BACHD/8-115)),(Q831Y6_ENTFA/7-112,Q99V56_STAAM/4-108)),(Q7VTR5_BORPE/10-122,(Q7NZE1_CHRVO/10-123,(Q8PGB0_XANAC/14-127,Q89FZ6_BRAJA/10-123)))))),(((((((Y1602_HAEIN/14-129,Q9CP47_PASMU/16-131),Q9JWV2_NEIMA/12-127),(Q9HWS4_PSEAE/24-152,Q88K91_PSEPK/19-147)),(((Q7NSB1_CHRVO/12-121,Q8XR31_RALSO/30-140),(Q8DDM4_VIBVU/23-132,Q87KG0_VIBPA/27-136)),(Q92W39_RHIME/11-127,((Q7NA66_PHOLL/20-145,Q7VUY8_BORPE/24-147),(Q9A3E7_CAUCR/28-138,Q88P63_PSEPK/6-116))))),(Q8EDN3_SHEON/21-129,Q9HYW2_PSEAE/22-130)),(((Q7W6U9_BORPA/7-125,Q83BV7_COXBU/131-249),(Q8P8R3_XANCP/15-131,(Q8F8V4_LEPIN/18-139,(Q8F8N5_LEPIN/13-133,Q7X1H0_9BACT/12-134)))),((Q97VC6_SULSO/9-122,((Q7VYL1_BORPE/8-121,((Q8KEE1_CHLTE/7-120,Q82V34_NITEU/11-126),(Q7VHA8_HELHP/8-121,Q7MRA2_WOLSU/17-130))),((Q7U687_SYNPX/15-125,Q7V0B0_PROMP/15-125),(Q7TUM8_PROMM/37-160,(Q7V328_PROMP/44-167,Q7VDS1_PROMA/43-166))))),(((Q8A9J9_BACTN/19-126,(Q7UE97_RHOBA/16-123,Q7US51_RHOBA/24-131)),Q8Y2U2_RALSO/28-136),(Q7NPD1_GLOVI/22-129,Q8UIR4_AGRT5/49-158))))),((((Q8EC25_SHEON/16-133,Q87K55_VIBPA/16-133),(Q82WY1_NITEU/20-85,(Q9HZY2_PSEAE/16-133,(Q883U2_PSESM/16-133,Q88KH7_PSEPK/17-134)))),((P96694_BACSU/5-122,Q812I5_BACCR/5-122),((O33110_MYCLE/114-233,O53252_MYCTU/114-235),(Q82AZ6_STRAW/10-126,(O05565_MYCLE/52-166,Q82PS9_STRAW/30-146))))),((O86323_MYCTU/16-128,(Q9K461_STRCO/11-119,(Q82B81_STRAW/12-123,Q9KY40_STRCO/14-124))),(((Q8UCZ3_AGRT5/16-121,Q98K39_RHILO/14-119),(Y886_HAEIN/11-122,Q9JR31_NEIMA/12-118)),Q89M65_BRAJA/31-140))))),Q8FPX7_COREF/162-279,Q8NR01_CORGL/191-308);
((((Q82HN4_STRAW/24-151:1.29678,((((Q8GA66_ECOLI/8-124:0.59685,(YPHA_ECOLI/16-132:0.30287,(Q8XWH4_RALSO/12-128:0.28506,Q88G88_PSEPK/13-129:0.17709):0.16874):0.13233):0.19518,(Q92TK3_RHIME/11-122:0.43050,(((((Q7N096_PHOLL/8-118:0.19812,YQJF_ECOLI/8-117:0.09481):0.09598,Q8CZQ7_YERPE/13-123:0.08262):0.33677,Q82UE4_NITEU/22-131:0.24897):0.22293,Q98JF9_RHILO/23-132:0.76206):0.14685,(Q8FX91_BRUSU/12-123:0.47563,(((Q8UHK0_AGRT5/23-147:0.17547,Q92SD1_RHIME/6-130:0.15653):0.28692,Q983U8_RHILO/8-125:0.57709):0.25376,Q983U6_RHILO/19-130:0.09701):0.12991):0.17861):0.06805):0.11859):0.11127,(((Q8KW46_9RHOB/66-182:0.92444,(Q9HWH6_PSEAE/14-130:0.70675,((Q8U4Y0_AGRT5/25-140:0.21177,Q92Y87_RHIME/25-140:0.19636):0.45878,Q89EW4_BRAJA/19-135:0.44004):0.17292):0.29335):0.29858,Q9KYL5_STRCO/4-131:1.10824):0.16132,(Q89SK7_BRAJA/66-183:0.81758,(Q83CN9_COXBU/6-122:0.36758,(((Q7V7V3_PROMM/10-111:0.49667,Q7VBT6_PROMA/9-119:0.46702):0.51796,(Q984Q4_RHILO/6-113:1.36368,Q98K48_RHILO/27-143:0.67262):0.31712):0.21797,(Q89MP6_BRAJA/4-138:0.91769,Q8YSN3_ANASP/6-117:0.43307):0.10234):0.27576):0.21239):0.03284):0.08164):0.22873,Q98JU3_RHILO/13-127:1.26316):0.26119):0.36476,((Q8EZJ9_LEPIN/12-124:1.45828,((Q8FR06_COREF/10-123:0.44882,Q9RTC4_DEIRA/8-120:0.87533):0.15276,(Q8FSC2_COREF/11-124:0.17015,Q8NT59_CORGL/10-123:0.17226):0.49854):0.18002):0.07021,(((YFID_BACSU/8-114:0.34867,(Q812S4_BACCR/6-118:0.47163,Q9RC47_BACHD/8-115:0.20977):0.26196):0.21495,(Q831Y6_ENTFA/7-112:0.68337,Q99V56_STAAM/4-108:0.80254):0.11211):0.31162,(Q7VTR5_BORPE/10-122:0.31220,(Q7NZE1_CHRVO/10-123:0.35119,(Q8PGB0_XANAC/14-127:0.30614,Q89FZ6_BRAJA/10-123:0.36293):0.17673):0.13624):0.45550):0.02358):0.09160):0.10511,(((((((Y1602_HAEIN/14-129:0.20134,Q9CP47_PASMU/16-131:0.15330):0.17194,Q9JWV2_NEIMA/12-127:0.14873):0.07682,(Q9HWS4_PSEAE/24-152:0.26475,Q88K91_PSEPK/19-147:0.08576):0.28755):0.46827,(((Q7NSB1_CHRVO/12-121:0.33870,Q8XR31_RALSO/30-140:0.46461):0.21117,(Q8DDM4_VIBVU/23-132:0.20649,Q87KG0_VIBPA/27-136:0.11572):0.39773):0.23371,(Q92W39_RHIME/11-127:0.44057,((Q7NA66_PHOLL/20-145:0.32638,Q7VUY8_BORPE/24-147:0.25730):0.12809,(Q9A3E7_CAUCR/28-138:0.20681,Q88P63_PSEPK/6-116:0.12560):0.18143):0.35666):0.21298):0.32788):0.29550,(Q8EDN3_SHEON/21-129:0.24036,Q9HYW2_PSEAE/22-130:0.26157):0.61081):0.29148,(((Q7W6U9_BORPA/7-125:0.57580,Q83BV7_COXBU/131-249:0.41630):0.78065,(Q8P8R3_XANCP/15-131:0.78742,(Q8F8V4_LEPIN/18-139:0.46680,(Q8F8N5_LEPIN/13-133:0.22213,Q7X1H0_9BACT/12-134:0.37661):0.13216):0.41914):0.21001):0.16582,((Q97VC6_SULSO/9-122:1.47207,((Q7VYL1_BORPE/8-121:0.24134,((Q8KEE1_CHLTE/7-120:0.44758,Q82V34_NITEU/11-126:0.52505):0.12533,(Q7VHA8_HELHP/8-121:0.41923,Q7MRA2_WOLSU/17-130:0.39258):0.10944):0.14513):0.48896,((Q7U687_SYNPX/15-125:0.13259,Q7V0B0_PROMP/15-125:0.16028):0.50984,(Q7TUM8_PROMM/37-160:0.16797,(Q7V328_PROMP/44-167:0.14110,Q7VDS1_PROMA/43-166:0.14069):0.19132):0.76891):0.18954):0.16549):0.04095,(((Q8A9J9_BACTN/19-126:0.51308,(Q7UE97_RHOBA/16-123:0.14136,Q7US51_RHOBA/24-131:0.09329):0.38305):0.23343,Q8Y2U2_RALSO/28-136:0.88130):0.34861,(Q7NPD1_GLOVI/22-129:0.21019,Q8UIR4_AGRT5/49-158:1.07492):0.38927):0.14041):0.22766):0.02358):0.10979,((((Q8EC25_SHEON/16-133:0.10207,Q87K55_VIBPA/16-133:0.12987):0.12553,(Q82WY1_NITEU/20-85:0.38151,(Q9HZY2_PSEAE/16-133:0.27196,(Q883U2_PSESM/16-133:0.24973,Q88KH7_PSEPK/17-134:0.11728):0.06673):0.05664):0.02346):0.20503,((P96694_BACSU/5-122:0.47055,Q812I5_BACCR/5-122:0.28963):0.14961,((O33110_MYCLE/114-233:0.26977,O53252_MYCTU/114-235:0.08145):0.77928,(Q82AZ6_STRAW/10-126:0.46933,(O05565_MYCLE/52-166:0.66642,Q82PS9_STRAW/30-146:0.42773):0.14506):0.08655):0.20909):0.10085):0.00632,((O86323_MYCTU/16-128:0.47120,(Q9K461_STRCO/11-119:0.28449,(Q82B81_STRAW/12-123:0.19058,Q9KY40_STRCO/14-124:0.07121):0.08751):0.33533):0.26281,(((Q8UCZ3_AGRT5/16-121:0.20790,Q98K39_RHILO/14-119:0.31370):0.16469,(Y886_HAEIN/11-122:0.42147,Q9JR31_NEIMA/12-118:0.18616):0.10220):0.02052,Q89M65_BRAJA/31-140:0.79760):0.18603):0.61517):0.25994):0.00000):1.43673,Q8FPX7_COREF/162-279:0.23382,Q8NR01_CORGL/191-308:0.00000);