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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF07650 phylogeny |
| ((((((((((((RS3_AQUAE/63-118,(((Q7UN14_RHOBA/68-122,(((RS3_HELPY/63-117,Q7VGD8_HELHP/63-117),Q7M8E0_WOLSU/63-117),RS3_CAMJE/63-117)),(RS3_CHLTR/63-117,RS3_CHLPN/63-117)),(RS3_CHLTE/65-119,(Q7MTL9_PORGI/62-116,Q8A482_BACTN/62-116)))),((((RS3_PSESM/63-117,((RS3_COXBU/63-117,Q820R1_NITEU/63-117),(Q7NQF8_CHRVO/63-117,Q7VTC7_BORPE/63-117))),RS3_XYLFT/63-117),((Q7VQE2_CANBF/63-117,RS3_WIGBR/63-117),RS3_ECOLI/62-116)),((RS3_BRAJA/63-117,RS3_BRUSU/63-117),RS3_CAUCR/63-117))),(((Q7P9C8_RICSI/65-120,Q7P4C5_FUSNV/64-118),(RS3_THETH/62-116,RS3_DEIRA/63-118)),((RS3_BACSU/61-115,RS3_STAEP/62-116),RS3_STRMU/62-116))),((((RS3_THETN/63-117,((Q890P3_CLOTE/63-119,RS3_CLOAB/63-118),RS3_CLOPE/63-118)),((RS3_MYCLE/62-116,Q83FZ2_TROWT/67-121),(((Q7WRJ7_9MOLU/67-121,Q7WRM1_9MOLU/67-121),(RS3_ACHSP/67-121,(RS3_ACHLA/67-121,(RS3_ANAAB/68-122,RS3_ACHAX/68-122)))),RS3_PHYS1/67-121))),RS3_LEPIN/62-116),((((RR3_MESVI/63-119,(RR3_NEPOL/63-119,RR3_CYAME/61-116)),RR3_GUITH/63-119),((RR3_ODOSI/65-121,RR3_CYACA/63-119),((((RS3_SYNY3/62-118,(RS3_SYNP6/62-119,RR3_CYAPA/63-119)),(Q7U4J4_SYNPX/63-120,RS3_ANASP/68-124)),Q7NEF8_GLOVI/63-118),RS3_SYNEL/63-119))),(RR3_GRATE/63-119,RR3_PORPU/63-119)))),RS3_THEMA/63-117),(RS3_TREPA/65-119,RS3_BORBU/66-120)),((((Q8EUC1_MYCPE/64-120,(RS3_MYCGA/63-119,RS3_UREPA/64-120)),RS3_MYCPN/63-119),RS3_MYCPU/64-121),(RS3_SPICI/62-119,RS3_MYCCA/62-119))),((O58437_PYRHO/75-130,(((Q8ZW84_PYRAE/261-331,Q96ZC3_SULTO/258-328),(ECR1_PYRFU/149-203,((((ERA_TREPA/255-319,Q8TXA3_METKA/22-83),ERA_AQUAE/235-299),ERA_DEIRA/246-310),(((((ERA_XYLFT/233-297,ERA_XANCP/233-297),((Q7NWC3_CHRVO/231-295,ERA_RALSO/233-297),(Q82SJ6_NITEU/231-295,(((ERA_ECOLI/233-297,ERA_PSESM/233-297),Q8EH80_SHEON/272-336),Q7MHN9_VIBVY/252-316)))),ERA_COXBU/229-293),(((ERA_CLOPE/228-292,(Q892S2_CLOTE/229-293,ERA_CLOAB/227-291)),ERA_THETN/230-294),((Q7P456_FUSNV/230-294,((((ERA_BORBU/226-290,ERA_MYCPU/229-293),(((Q8FNG0_COREF/259-323,ERA_CORGL/241-305),Q8G5Z2_BIFLO/290-354),(ERA_MYCTU/236-300,Q82BV9_STRAW/266-330))),(Q83MZ2_TROWT/236-300,(((O68658_HELPY/103-167,Q7VJD5_HELHP/238-302),Q7M8Z8_WOLSU/231-295),ERA_CAMJE/224-288))),((ERA_THEMA/230-294,((Q7ND14_GLOVI/236-300,(Q7U5T2_SYNPX/243-307,Q7V0H6_PROMP/235-299)),(ERA_ANASP/256-320,(ERA_SYNY3/247-311,Q8DMQ5_SYNEL/238-302)))),(((Q8EW66_MYCPE/204-268,ERA_UREPA/232-296),Q7NB86_MYCGA/231-295),(Q8KFN3_CHLTE/241-305,Q8VZ74_ARATH/356-420))))),((Q7MT49_PORGI/232-296,Q8A136_BACTN/226-290),((((ERA_LACPL/233-297,(ERA_STRGC/230-294,ERA_LACLA/233-297)),Q831T9_ENTFA/231-295),ERA_LISMO/232-296),((ERA_BACSU/232-296,(Q8EPY0_OCEIH/231-295,ERA_BACHD/235-299)),ERA_STAEP/230-294)))))),(Q7VW40_BORPE/231-295,((ERA_BRAJA/239-303,((ERA_BRUSU/243-307,ERA_AGRT5/248-312),ERA_CAUCR/248-312)),(Q7PAQ9_RICSI/275-336,ERA_RICPR/231-292))))))),((((((O59228_PYRHO/35-107,NUSA_THECE/35-107),(O27128_METTH/35-105,Q8PUR4_METMA/34-103)),Q8TXJ1_METKA/35-105),(((NUSA_HALMO/33-100,NUSA_HALN1/33-101),(((NUSA_SULAC/36-106,Q976A7_SULTO/23-93),Q980R4_SULSO/17-86),Q8ZYQ5_PYRAE/36-106)),Q9YAU4_AERPE/37-107)),O28388_ARCFU/33-101),(NUSA_METVA/33-102,NUSA_METJA/34-102)))),(RR3_EUGGR/69-130,(RS3_METKA/48-104,(RS3_HALN1/41-96,((RS3_METMA/41-96,(((RS3_THEVO/40-95,RS3_METJA/40-95),(((RS3_SULTO/42-97,RS3_SULSO/42-97),RS3_AERPE/43-98),RS3_PYRHO/41-96)),RS3_ARCFU/41-95)),RS3_METTH/40-95)))))),Q98S35_GUITH/46-103),Q8IKH8_PLAF7/45-103),((RS3_YEAST/44-101,(P90526_DICDI/48-105,Q86DZ5_SCHJA/47-104)),RS3A_XENLA/45-102)),RS3_SCHPO/47-104,Q7RV52_NEUCR/49-106); |
| ((((((((((((RS3_AQUAE/63-118:0.31079,(((Q7UN14_RHOBA/68-122:0.54555,(((RS3_HELPY/63-117:0.16702,Q7VGD8_HELHP/63-117:0.15324):0.04566,Q7M8E0_WOLSU/63-117:0.04036):0.14469,RS3_CAMJE/63-117:0.29074):0.19866):0.07195,(RS3_CHLTR/63-117:0.08431,RS3_CHLPN/63-117:0.15151):0.17420):0.09451,(RS3_CHLTE/65-119:0.65600,(Q7MTL9_PORGI/62-116:0.10990,Q8A482_BACTN/62-116:0.13355):0.33995):0.04105):0.06815):0.03080,((((RS3_PSESM/63-117:0.11210,((RS3_COXBU/63-117:0.32986,Q820R1_NITEU/63-117:0.15011):0.04585,(Q7NQF8_CHRVO/63-117:0.12182,Q7VTC7_BORPE/63-117:0.16024):0.05697):0.09015):0.11302,RS3_XYLFT/63-117:0.24823):0.05037,((Q7VQE2_CANBF/63-117:0.26680,RS3_WIGBR/63-117:0.19023):0.05779,RS3_ECOLI/62-116:0.09600):0.15880):0.12502,((RS3_BRAJA/63-117:0.18231,RS3_BRUSU/63-117:0.15973):0.10388,RS3_CAUCR/63-117:0.18903):0.08363):0.11661):0.11336,(((Q7P9C8_RICSI/65-120:0.60220,Q7P4C5_FUSNV/64-118:0.35136):0.13400,(RS3_THETH/62-116:0.18402,RS3_DEIRA/63-118:0.46595):0.28760):0.10453,((RS3_BACSU/61-115:0.03611,RS3_STAEP/62-116:0.32461):0.17197,RS3_STRMU/62-116:0.17792):0.10892):0.10176):0.04954,((((RS3_THETN/63-117:0.21810,((Q890P3_CLOTE/63-119:0.08967,RS3_CLOAB/63-118:0.17086):0.07210,RS3_CLOPE/63-118:0.10167):0.31894):0.16349,((RS3_MYCLE/62-116:0.11363,Q83FZ2_TROWT/67-121:0.12272):0.05287,(((Q7WRJ7_9MOLU/67-121:0.00000,Q7WRM1_9MOLU/67-121:0.20482):0.77414,(RS3_ACHSP/67-121:0.00000,(RS3_ACHLA/67-121:0.36160,(RS3_ANAAB/68-122:0.23003,RS3_ACHAX/68-122:0.27974):0.07898):0.13452):0.20776):0.14740,RS3_PHYS1/67-121:0.28076):0.40428):0.10722):0.09675,RS3_LEPIN/62-116:0.49244):0.06662,((((RR3_MESVI/63-119:0.57202,(RR3_NEPOL/63-119:0.45301,RR3_CYAME/61-116:0.57909):0.02187):0.09227,RR3_GUITH/63-119:0.48999):0.08318,((RR3_ODOSI/65-121:0.61871,RR3_CYACA/63-119:0.33615):0.18132,((((RS3_SYNY3/62-118:0.18298,(RS3_SYNP6/62-119:0.11444,RR3_CYAPA/63-119:0.29621):0.04748):0.04985,(Q7U4J4_SYNPX/63-120:0.38869,RS3_ANASP/68-124:0.12227):0.03423):0.07038,Q7NEF8_GLOVI/63-118:0.17842):0.02357,RS3_SYNEL/63-119:0.30793):0.21425):0.03787):0.08315,(RR3_GRATE/63-119:0.32457,RR3_PORPU/63-119:0.30735):0.14216):0.41991):0.04078):0.09026,RS3_THEMA/63-117:0.31367):0.17931,(RS3_TREPA/65-119:0.20761,RS3_BORBU/66-120:0.42060):0.16574):0.09287,((((Q8EUC1_MYCPE/64-120:0.41719,(RS3_MYCGA/63-119:0.25262,RS3_UREPA/64-120:0.78141):0.12249):0.18995,RS3_MYCPN/63-119:0.57331):0.46481,RS3_MYCPU/64-121:0.59668):0.05547,(RS3_SPICI/62-119:0.24293,RS3_MYCCA/62-119:0.50065):0.34864):0.23256):0.07960,((O58437_PYRHO/75-130:0.71843,(((Q8ZW84_PYRAE/261-331:0.39565,Q96ZC3_SULTO/258-328:0.20631):0.84539,(ECR1_PYRFU/149-203:1.71750,((((ERA_TREPA/255-319:0.96871,Q8TXA3_METKA/22-83:0.60804):0.37940,ERA_AQUAE/235-299:0.21011):0.29585,ERA_DEIRA/246-310:0.49127):0.09253,(((((ERA_XYLFT/233-297:0.18545,ERA_XANCP/233-297:0.06494):0.30833,((Q7NWC3_CHRVO/231-295:0.24115,ERA_RALSO/233-297:0.27143):0.14076,(Q82SJ6_NITEU/231-295:0.28189,(((ERA_ECOLI/233-297:0.17935,ERA_PSESM/233-297:0.26452):0.03745,Q8EH80_SHEON/272-336:0.13845):0.05631,Q7MHN9_VIBVY/252-316:0.07820):0.11576):0.02839):0.05198):0.11339,ERA_COXBU/229-293:0.19903):0.22137,(((ERA_CLOPE/228-292:0.33342,(Q892S2_CLOTE/229-293:0.19393,ERA_CLOAB/227-291:0.29587):0.06366):0.16178,ERA_THETN/230-294:0.16347):0.12154,((Q7P456_FUSNV/230-294:0.32728,((((ERA_BORBU/226-290:0.52582,ERA_MYCPU/229-293:0.41131):0.23880,(((Q8FNG0_COREF/259-323:0.12612,ERA_CORGL/241-305:0.12983):0.50289,Q8G5Z2_BIFLO/290-354:0.45879):0.09278,(ERA_MYCTU/236-300:0.15998,Q82BV9_STRAW/266-330:0.34229):0.01936):0.19212):0.06904,(Q83MZ2_TROWT/236-300:0.55008,(((O68658_HELPY/103-167:0.34586,Q7VJD5_HELHP/238-302:0.41743):0.11037,Q7M8Z8_WOLSU/231-295:0.22357):0.13658,ERA_CAMJE/224-288:0.38327):0.14894):0.08807):0.10587,((ERA_THEMA/230-294:0.51431,((Q7ND14_GLOVI/236-300:0.27108,(Q7U5T2_SYNPX/243-307:0.15373,Q7V0H6_PROMP/235-299:0.19934):0.16758):0.07105,(ERA_ANASP/256-320:0.12308,(ERA_SYNY3/247-311:0.26055,Q8DMQ5_SYNEL/238-302:0.29345):0.02868):0.04035):0.17039):0.09313,(((Q8EW66_MYCPE/204-268:0.35654,ERA_UREPA/232-296:0.37996):0.07749,Q7NB86_MYCGA/231-295:0.29755):0.22735,(Q8KFN3_CHLTE/241-305:0.21681,Q8VZ74_ARATH/356-420:0.57535):0.14274):0.20663):0.00000):0.06563):0.05644,((Q7MT49_PORGI/232-296:0.27179,Q8A136_BACTN/226-290:0.20505):0.28184,((((ERA_LACPL/233-297:0.20187,(ERA_STRGC/230-294:0.04349,ERA_LACLA/233-297:0.20638):0.11090):0.12541,Q831T9_ENTFA/231-295:0.06447):0.06041,ERA_LISMO/232-296:0.23847):0.07861,((ERA_BACSU/232-296:0.11530,(Q8EPY0_OCEIH/231-295:0.19513,ERA_BACHD/235-299:0.10681):0.04171):0.11113,ERA_STAEP/230-294:0.15200):0.07024):0.08242):0.10004):0.09924):0.06276):0.06214,(Q7VW40_BORPE/231-295:0.42636,((ERA_BRAJA/239-303:0.00000,((ERA_BRUSU/243-307:0.10598,ERA_AGRT5/248-312:0.13629):0.10043,ERA_CAUCR/248-312:0.54547):0.10361):0.36234,(Q7PAQ9_RICSI/275-336:0.03673,ERA_RICPR/231-292:0.22678):0.42921):0.39232):0.16022):0.12175):0.47604):0.83202):0.31600,((((((O59228_PYRHO/35-107:0.20857,NUSA_THECE/35-107:0.06622):0.33034,(O27128_METTH/35-105:0.30879,Q8PUR4_METMA/34-103:0.46550):0.11929):0.00000,Q8TXJ1_METKA/35-105:0.43967):0.06132,(((NUSA_HALMO/33-100:0.54352,NUSA_HALN1/33-101:0.21674):0.66088,(((NUSA_SULAC/36-106:0.18460,Q976A7_SULTO/23-93:0.06029):0.15733,Q980R4_SULSO/17-86:0.13665):0.34339,Q8ZYQ5_PYRAE/36-106:0.49039):0.12325):0.10440,Q9YAU4_AERPE/37-107:0.69316):0.07468):0.13903,O28388_ARCFU/33-101:0.40719):0.42246,(NUSA_METVA/33-102:0.25079,NUSA_METJA/34-102:0.20629):0.13599):0.41700):0.14785):0.87746,(RR3_EUGGR/69-130:1.12056,(RS3_METKA/48-104:0.85401,(RS3_HALN1/41-96:0.28406,((RS3_METMA/41-96:0.36881,(((RS3_THEVO/40-95:0.48039,RS3_METJA/40-95:0.15038):0.16943,(((RS3_SULTO/42-97:0.17710,RS3_SULSO/42-97:0.06822):0.13207,RS3_AERPE/43-98:0.57111):0.22594,RS3_PYRHO/41-96:0.30310):0.00374):0.07743,RS3_ARCFU/41-95:0.39841):0.10886):0.00000,RS3_METTH/40-95:0.37836):0.06109):0.00000):0.25856):0.01816):0.10114):1.06233,Q98S35_GUITH/46-103:0.57589):0.18099,Q8IKH8_PLAF7/45-103:0.19751):0.02156,((RS3_YEAST/44-101:0.19935,(P90526_DICDI/48-105:0.21872,Q86DZ5_SCHJA/47-104:0.33223):0.08220):0.06345,RS3A_XENLA/45-102:0.13838):0.02045):0.04180,RS3_SCHPO/47-104:0.07149,Q7RV52_NEUCR/49-106:0.16146); |