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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF07581 phylogeny
for nucleotide alignment


 
((((((((((((Q7NY05_CHRVO/637-663,(((Q7NY05_CHRVO/578-603,(Q9HWU6_PSEAE/646-678,Q9HWU6_PSEAE/890-915)),((((Q7WYX3_PSEAE/658-686,Q9HVN6_PSEAE/1295-1323),Q9HWU6_PSEAE/774-801),(Q7NY05_CHRVO/695-721,Q9HWU6_PSEAE/745-771)),(Q9HWU6_PSEAE/804-830,Q7WYX3_PSEAE/629-655))),(Q8G6G7_BIFLO/1855-1883,Q8G6G7_BIFLO/436-462))),((((Q7WYX3_PSEAE/368-394,(((Q7WYX3_PSEAE/240-265,(Q7WYX3_PSEAE/308-334,Q9HWU6_PSEAE/686-712)),(Q7WYX3_PSEAE/715-740,Q9HWU6_PSEAE/918-945)),(((Q7WYX3_PSEAE/397-423,Q7WYX3_PSEAE/484-510),(Q9HWU6_PSEAE/616-642,Q9KX28_OLICA/275-301)),Q9HWU6_PSEAE/585-610))),((Q7WYX3_PSEAE/210-236,Q9HWU6_PSEAE/948-973),Q7WYX3_PSEAE/455-481)),(((((Q7WYX3_PSEAE/513-539,Q7WYX3_PSEAE/542-568),Q7WYX3_PSEAE/426-452),Q9HWU6_PSEAE/862-887),((Q7WYX3_PSEAE/338-364,Q7WYX3_PSEAE/571-597),Q7NY05_CHRVO/794-820)),(Q9HWU6_PSEAE/833-859,Q9HWU6_PSEAE/716-742))),(Q7WYX3_PSEAE/689-714,(Q7NY05_CHRVO/667-692,(Q7NY05_CHRVO/754-779,Q7NY05_CHRVO/832-858))))),(Q8G6G7_BIFLO/742-770,((Q8TKD6_METAC/1290-1318,(Q8TKD6_METAC/3104-3133,(Q8TKD6_METAC/795-824,Q8TKD6_METAC/3888-3917))),((Q7R3M1_GIALA/139-166,(Q7NY05_CHRVO/605-630,Q7QVW0_GIALA/1226-1251)),Q8TKD6_METAC/2364-2392)))),((((((Q7R3M1_GIALA/1344-1370,(Q7QVW0_GIALA/1288-1314,Q7QX85_GIALA/404-430)),((((ZMPC_STRPN/906-933,ZMPC_STRPN/875-902),(O33691_STROR/837-864,O33759_STRSA/851-878)),Q7R2N2_GIALA/585-620),Q7QZT6_GIALA/222-249)),Q7QX85_GIALA/244-269),((Q7QX85_GIALA/144-169,Q8TKD6_METAC/1259-1286),((O33759_STRSA/817-845,O33691_STROR/803-831),IGA1B_STRPN/888-916))),(Q7WYX3_PSEAE/269-300,((((Q8TKD6_METAC/3196-3224,Q8TKD6_METAC/891-919),Q8TKD6_METAC/3979-4009),Q8TKD6_METAC/260-288),Q7MSZ4_PORGI/345-378))),(((Q8A351_BACTN/114-141,Q8A351_BACTN/213-240),(Q8A351_BACTN/143-174,Q8QNC2_9PHYC/681-707)),(Q7QVW0_GIALA/1197-1222,Q7QVW0_GIALA/1316-1342)))),(((((O33691_STROR/770-796,O33759_STRSA/784-810),Q7QVW0_GIALA/101-128),ZMPC_STRPN/808-834),Q7QPZ3_GIALA/144-173),((((Q8TKD6_METAC/859-886,((Q8TKD6_METAC/3947-3974,Q8TKD6_METAC/3164-3191),Q8TKD6_METAC/228-255)),(Q7MSZ4_PORGI/286-314,(Q8TKD6_METAC/1228-1254,Q8TKD6_METAC/2443-2469))),Q8TKD6_METAC/3266-3301),((Q8TKD6_METAC/1325-1358,Q8TKD6_METAC/2557-2590),Q8TKD6_METAC/2600-2627)))),((Q8TKD6_METAC/2393-2420,(((Q8TKD6_METAC/3134-3159,Q8TKD6_METAC/3918-3943),Q8TKD6_METAC/825-855),Q8TKD6_METAC/198-223)),(Q8TKD6_METAC/1184-1211,((Q8TKD6_METAC/370-396,(Q8TKD6_METAC/1001-1027,Q8TKD6_METAC/3303-3329)),Q8TKD6_METAC/1940-1966)))),(Q7MSZ4_PORGI/249-277,((Q8G6G7_BIFLO/318-346,Q7MSZ4_PORGI/384-411),Q7MSZ4_PORGI/315-343))),(((Q8TKD6_METAC/293-325,Q8TKD6_METAC/924-956),Q8TKD6_METAC/4014-4046),Q8TKD6_METAC/3229-3262)),Q8G6G7_BIFLO/1962-1990),Q8TKD6_METAC/763-794),(Q8TKD6_METAC/3072-3103,Q8TKD6_METAC/1706-1737)),Q8TKD6_METAC/135-166,Q8TKD6_METAC/3856-3887);
((((((((((((Q7NY05_CHRVO/637-663:0.24517,(((Q7NY05_CHRVO/578-603:0.20688,(Q9HWU6_PSEAE/646-678:0.47449,Q9HWU6_PSEAE/890-915:0.27141):0.13329):0.07838,((((Q7WYX3_PSEAE/658-686:0.03720,Q9HVN6_PSEAE/1295-1323:0.13261):0.46992,Q9HWU6_PSEAE/774-801:0.33698):0.12397,(Q7NY05_CHRVO/695-721:0.32163,Q9HWU6_PSEAE/745-771:0.37402):0.13596):0.06057,(Q9HWU6_PSEAE/804-830:0.18100,Q7WYX3_PSEAE/629-655:0.44192):0.10134):0.10958):0.04298,(Q8G6G7_BIFLO/1855-1883:0.42151,Q8G6G7_BIFLO/436-462:0.34542):0.26628):0.07381):0.00974,((((Q7WYX3_PSEAE/368-394:0.37004,(((Q7WYX3_PSEAE/240-265:0.15752,(Q7WYX3_PSEAE/308-334:0.38237,Q9HWU6_PSEAE/686-712:0.27365):0.25620):0.06177,(Q7WYX3_PSEAE/715-740:0.36195,Q9HWU6_PSEAE/918-945:0.43542):0.18046):0.11294,(((Q7WYX3_PSEAE/397-423:0.15043,Q7WYX3_PSEAE/484-510:0.26923):0.13846,(Q9HWU6_PSEAE/616-642:0.14424,Q9KX28_OLICA/275-301:0.60751):0.13443):0.05065,Q9HWU6_PSEAE/585-610:0.34059):0.07084):0.07149):0.01794,((Q7WYX3_PSEAE/210-236:0.26568,Q9HWU6_PSEAE/948-973:0.29494):0.03495,Q7WYX3_PSEAE/455-481:0.39639):0.05186):0.08334,(((((Q7WYX3_PSEAE/513-539:0.42609,Q7WYX3_PSEAE/542-568:0.18621):0.10701,Q7WYX3_PSEAE/426-452:0.28843):0.04195,Q9HWU6_PSEAE/862-887:0.21233):0.04381,((Q7WYX3_PSEAE/338-364:0.43019,Q7WYX3_PSEAE/571-597:0.18681):0.10408,Q7NY05_CHRVO/794-820:0.22970):0.09907):0.05181,(Q9HWU6_PSEAE/833-859:0.30611,Q9HWU6_PSEAE/716-742:0.35751):0.08092):0.08435):0.11862,(Q7WYX3_PSEAE/689-714:0.26538,(Q7NY05_CHRVO/667-692:0.13030,(Q7NY05_CHRVO/754-779:0.34888,Q7NY05_CHRVO/832-858:0.26012):0.02635):0.07615):0.03239):0.06525):0.09152,(Q8G6G7_BIFLO/742-770:0.43607,((Q8TKD6_METAC/1290-1318:0.60086,(Q8TKD6_METAC/3104-3133:0.27280,(Q8TKD6_METAC/795-824:0.23218,Q8TKD6_METAC/3888-3917:0.13268):0.04444):0.28376):0.19285,((Q7R3M1_GIALA/139-166:0.58791,(Q7NY05_CHRVO/605-630:0.43915,Q7QVW0_GIALA/1226-1251:0.36363):0.09086):0.05619,Q8TKD6_METAC/2364-2392:0.28059):0.06781):0.10537):0.03506):0.14227,((((((Q7R3M1_GIALA/1344-1370:0.21479,(Q7QVW0_GIALA/1288-1314:0.24912,Q7QX85_GIALA/404-430:0.61573):0.20009):0.23714,((((ZMPC_STRPN/906-933:0.69638,ZMPC_STRPN/875-902:0.32380):0.19183,(O33691_STROR/837-864:0.39041,O33759_STRSA/851-878:0.00000):0.27306):0.00879,Q7R2N2_GIALA/585-620:0.56951):0.10605,Q7QZT6_GIALA/222-249:0.34140):0.10262):0.15420,Q7QX85_GIALA/244-269:0.53908):0.28668,((Q7QX85_GIALA/144-169:0.44298,Q8TKD6_METAC/1259-1286:0.47483):0.18226,((O33759_STRSA/817-845:0.28537,O33691_STROR/803-831:0.12315):0.13074,IGA1B_STRPN/888-916:0.00000):0.36748):0.07890):0.09453,(Q7WYX3_PSEAE/269-300:0.30334,((((Q8TKD6_METAC/3196-3224:0.44373,Q8TKD6_METAC/891-919:0.17150):0.04449,Q8TKD6_METAC/3979-4009:0.19745):0.16223,Q8TKD6_METAC/260-288:0.00000):0.26152,Q7MSZ4_PORGI/345-378:0.75481):0.15289):0.30578):0.08057,(((Q8A351_BACTN/114-141:0.37678,Q8A351_BACTN/213-240:0.26012):0.13744,(Q8A351_BACTN/143-174:0.47146,Q8QNC2_9PHYC/681-707:0.43836):0.23776):0.17004,(Q7QVW0_GIALA/1197-1222:0.37520,Q7QVW0_GIALA/1316-1342:0.28247):0.14371):0.08157):0.12923):0.08833,(((((O33691_STROR/770-796:0.18508,O33759_STRSA/784-810:0.09177):0.18414,Q7QVW0_GIALA/101-128:0.58496):0.22207,ZMPC_STRPN/808-834:0.29144):0.06504,Q7QPZ3_GIALA/144-173:0.59911):0.27683,((((Q8TKD6_METAC/859-886:0.35904,((Q8TKD6_METAC/3947-3974:0.38208,Q8TKD6_METAC/3164-3191:0.14684):0.08903,Q8TKD6_METAC/228-255:0.15703):0.23134):0.17878,(Q7MSZ4_PORGI/286-314:0.62577,(Q8TKD6_METAC/1228-1254:0.34843,Q8TKD6_METAC/2443-2469:0.13406):0.18941):0.06023):0.04496,Q8TKD6_METAC/3266-3301:0.42485):0.11898,((Q8TKD6_METAC/1325-1358:0.42806,Q8TKD6_METAC/2557-2590:0.21862):0.11850,Q8TKD6_METAC/2600-2627:0.52175):0.07884):0.06915):0.05849):0.07020,((Q8TKD6_METAC/2393-2420:0.15989,(((Q8TKD6_METAC/3134-3159:0.36315,Q8TKD6_METAC/3918-3943:0.31260):0.14806,Q8TKD6_METAC/825-855:0.20802):0.09975,Q8TKD6_METAC/198-223:0.08983):0.26776):0.17296,(Q8TKD6_METAC/1184-1211:0.34061,((Q8TKD6_METAC/370-396:0.04317,(Q8TKD6_METAC/1001-1027:0.15595,Q8TKD6_METAC/3303-3329:0.15734):0.09915):0.04582,Q8TKD6_METAC/1940-1966:0.08424):0.36388):0.05509):0.09216):0.07163,(Q7MSZ4_PORGI/249-277:0.55398,((Q8G6G7_BIFLO/318-346:0.51840,Q7MSZ4_PORGI/384-411:0.51284):0.12901,Q7MSZ4_PORGI/315-343:0.28778):0.15508):0.22997):0.17335,(((Q8TKD6_METAC/293-325:0.29528,Q8TKD6_METAC/924-956:0.19018):0.07735,Q8TKD6_METAC/4014-4046:0.17224):0.17351,Q8TKD6_METAC/3229-3262:0.30293):0.16014):0.21901,Q8G6G7_BIFLO/1962-1990:0.32481):0.60397,Q8TKD6_METAC/763-794:0.09990):0.08799,(Q8TKD6_METAC/3072-3103:0.22642,Q8TKD6_METAC/1706-1737:0.11271):0.09841):0.10981,Q8TKD6_METAC/135-166:0.12095,Q8TKD6_METAC/3856-3887:0.06369);