EMBL-EBI
>
Goldman Group
PANDIT Home
|
Browse PANDIT
|
Help on PANDIT
|
Release notes
|
Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF07581 - Glug)
The GLUG motif
(
Pfam
reference: accession no.
PF07581
)
(
Interpro
reference: accession no.
IPR011493
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
117 sequences @ 38 aa
(ave. pairwise identity: 0.28)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 78.51)
nucleotides
(available for above)
116 sequences @ 114 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 50.92)
amino acids, restricted set
(corresp. to available nt seqs)
116 sequences @ 38 aa
(ave. pairwise identity: 0.28)
New Hampshire format
(total tree length: 76.66)