EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF07478 - Dala_Dala_lig_C)
D-ala D-ala ligase C-terminus
(Pfam reference: accession no. PF07478)
(Interpro reference: accession no. IPR011095)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
18 sequences @ 229 aa
(ave. pairwise identity: 0.35)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 10.95)
nucleotides
(available for above)
18 sequences @ 687 bp
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 8.37)
amino acids, restricted set
(corresp. to available nt seqs)
18 sequences @ 229 aa
(ave. pairwise identity: 0.35)
New Hampshire format
(total tree length: 10.95)