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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF07244 - Surf_Ag_VNR)
Surface antigen variable number repeat
(Pfam reference: accession no. PF07244)
(Interpro reference: accession no. IPR010827)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
194 sequences @ 82 aa
(ave. pairwise identity: 0.20)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 131.76)
nucleotides
(available for above)
194 sequences @ 246 bp
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 86.96)
amino acids, restricted set
(corresp. to available nt seqs)
194 sequences @ 82 aa
(ave. pairwise identity: 0.20)
New Hampshire format
(total tree length: 131.76)