EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF07206 - Baculo_LEF-10)
Baculovirus late expression factor 10 (LEF-10)
(Pfam reference: accession no. PF07206)
(Interpro reference: accession no. IPR009855)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
8 sequences @ 75 aa
(ave. pairwise identity: 0.40)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 4.63)
nucleotides
(available for above)
8 sequences @ 225 bp
(ave. pairwise identity: 0.56)
New Hampshire format
(total tree length: 2.65)
amino acids, restricted set
(corresp. to available nt seqs)
8 sequences @ 75 aa
(ave. pairwise identity: 0.40)
New Hampshire format
(total tree length: 4.63)