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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF07122 - VLPT)
Variable length PCR target protein (VLPT)
(
Pfam
reference: accession no.
PF07122
)
(
Interpro
reference: accession no.
IPR009805
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
4 sequences @ 30 aa
(ave. pairwise identity: 0.66)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.99)
nucleotides
(available for above)
4 sequences @ 90 bp
(ave. pairwise identity: 0.82)
New Hampshire format
(total tree length: 0.44)
amino acids, restricted set
(corresp. to available nt seqs)
4 sequences @ 30 aa
(ave. pairwise identity: 0.66)
New Hampshire format
(total tree length: 0.99)