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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF07122 - VLPT)
Variable length PCR target protein (VLPT)
(Pfam reference: accession no. PF07122)
(Interpro reference: accession no. IPR009805)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
4 sequences @ 30 aa
(ave. pairwise identity: 0.66)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.99)
nucleotides
(available for above)
4 sequences @ 90 bp
(ave. pairwise identity: 0.82)
New Hampshire format
(total tree length: 0.44)
amino acids, restricted set
(corresp. to available nt seqs)
4 sequences @ 30 aa
(ave. pairwise identity: 0.66)
New Hampshire format
(total tree length: 0.99)