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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF06970 - RepA_N)
Replication initiator protein A (RepA) N-terminus
(Pfam reference: accession no. PF06970)
(Interpro reference: accession no. IPR010724)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
24 sequences @ 78 aa
(ave. pairwise identity: 0.45)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 11.31)
nucleotides
(available for above)
24 sequences @ 234 bp
(ave. pairwise identity: 0.55)
New Hampshire format
(total tree length: 8.91)
amino acids, restricted set
(corresp. to available nt seqs)
24 sequences @ 78 aa
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 11.31)