EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF06940 - DUF1287)
Protein of unknown function (DUF1287)
(Pfam reference: accession no. PF06940)
(Interpro reference: accession no. IPR009706)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
5 sequences @ 184 aa
(ave. pairwise identity: 0.56)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 1.84)
nucleotides
(available for above)
5 sequences @ 552 bp
(ave. pairwise identity: 0.58)
New Hampshire format
(total tree length: 1.67)
amino acids, restricted set
(corresp. to available nt seqs)
5 sequences @ 184 aa
(ave. pairwise identity: 0.56)
New Hampshire format
(total tree length: 1.84)