EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF06827 - zf-FPG_IleRS)
Zinc finger found in FPG and IleRS
(Pfam reference: accession no. PF06827)
(Interpro reference: accession no. IPR010663)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
77 sequences @ 32 aa
(ave. pairwise identity: 0.34)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 33.78)
nucleotides
(available for above)
74 sequences @ 96 bp
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 25.38)
amino acids, restricted set
(corresp. to available nt seqs)
74 sequences @ 32 aa
(ave. pairwise identity: 0.34)
New Hampshire format
(total tree length: 33.08)