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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF06826 alignment
(34 sequences with 189 aa)


Y4083_YERPE/10-180 MLALVAVLGLWIGNWKI----..YGVGLGIG-GVLFGGIIVGHFAQTYQIV--LNGDMLHFIQEFGLILFVYTIGIQVGPGFFSSLRVS.GLRLNCFAILMVVVGGLVTAIIHK-.LFAVPLPIILGVFSGAVTNTPALGAAQQILTDLGSPP.----QLVSQMGMGYAMAYPFGICGILLVM.WLIRL
YIDE_SHIFL/10-180 ILALVAVVGLFIGNVKF----..RGIGLGIG-GVLFGGIIVGHFVSQAGMT--LSSDMLHVIQEFGLILFVYTIGIQVGPGFFASLRVS.GLRLNLFAVLIVIIGGLVTAILHK-.LFDIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPM.----EMVDQMGMSYAMAYPFGICGILFTM.WMLRV
Y035_HAEIN/10-179 LLALVAVIGLWIGHWKI----..RGVGLGIG-GVLFGGIIVAHFTNQYGLK--LDAHTLHFVQEFGLILFVYTIGIQVGPGFFSSLRKS.GLKLNAFAILIILLGSIAVVLVHK-.IADVPLDIALGIYSGAVTNTPALGAGQQILAELGVPQ.-----TTVTMGVSYAMAYPFGICGILLAM.WLIRL
Q8A8D8_BACTN/19-182 VLSLISAIGLGLGRVHF----..WGVSLGVT-FVFFAGILAGHFGLS------VDPQMLNYAESFGLVIFVYSLGLQVGPGFFSSFRKG.GVTLNMLALAVVLLGTLLTVVASY-.ATGVSLPDMVGILCGATTNTPALGAAQQTLKQMGIES.-------STPALGCAVAYPMGVIGVILAV.LLIRK
Q8A5Z4_BACTN/20-185 LYAFVVAAGVYLGKIKI----..FGVSLGVT-FVLFAGILMGHFGFT------ADTHILHFIREFGLILFVFCIGLQVGPSFFSSFKKG.GMTLNLLAVGIVVLNIAVALGLYYLwNGRVELPMMVGILYGAVTNTPGLGAANEALNQLSYNG.-------PQIALGYACAYPLGVVGIIGSI.IAIRY
Q8AAG5_BACTN/12-166 SLFLIVALGFMLGRIKI----..KGLSLDVS-AVIFIALLFGHF----------GVIIPKELGNFGLVLFIFTIGIQAGPGFFDSFRSK.GKTLILITMLIICSACLTAVGLKY-.AFDIDTPSVVGLIAGALTSTPGLAVAIDS-THSPLAS.-----------IAYGIAYPFGVIGVILFV.KLLPK
Q8NSS8_CORGL/12-174 ALVVILAVGLAIGQIRV----..FGLSLGAA-AVLFVALVVSTAN--------TDIVIPMIVYQLGLAMFVYVIGLSAGPAFFSEFAKK.GWKLTIFMLLLLATLIGLAWVLIK-.SLGLDAAIGTGMFTGALTSTPGMAAVVELIEGIDPSL.------ASEPVIGYSLAYPGAVLGSIVVA.AVGAK
Q8FS11_COREF/12-171 ALAVILAVGLAIGRISL----..FGVSLGAA-AVLIVALVVSTLN--------PDIQIPAFVFQLGLAMFVYVIGISAGPAFFREFRSR.GWKLTLFMITLLVSLTALAWVLIR-.AFGLGAGAGAGMFAGSLTSTPGMAAVVALMDPAQAGD.---------PVIGYSLAYPGAVLGSILVA.AVGAK
Q8NNI8_CORGL/11-179 ALVVIMTVGLLLGRIKI----..FGFRLGVA-AVLFVGLALSTIE--------PDISVPSLIYVVGLSLFVYTIGLEAGPGFFTSMKTT.GLRNNALTLGAIIATTALAWALIT-.VLNIDAASGAGMLTGALTNTPAMAAVVDALPSLIDDT.GQLHLIAELPVVAYSLAYPLGVLIVILSI.AIFSS
Q8FNP2_COREF/11-180 ALVAIMGIGLLLGRIRF----..FGFRLGVA-AVLFVGLAFSTIE--------PDITVPPLIYVVGLALFVYTIGLEAGRDFFRSLRST.GLRNNGLALGAIIATTAIAWVVIK-.ALGLAPATGAGMLTGALTNTPAMAAVVDALPALIDDNpTDAARILELPVVAYSLTYPLGVLVVILTI.AVCGG
O52005_HALN1/14-174 VMFLAVVVGMAFGRINFG---..RGIKFGVA-GPLFAGLVLGHF----------GFTVPDAYSGLTLALFVAAVGLIAAHEIEGTVKTY.GLNFIAISVLMPTIAAILTYVWVVVvFPNASTGLIMGSFSGALTSSPGLGSAIEALPEAAAQQ.---------YQIGHSVGYVIGVLIIVMFQ.QLYPK
Q8L3K8_TETHA/15-183 TIFICLALGYLLGKLKI----..GSFTLGATVGVLIVALLIGQL---------GVFPRDTLLGDIFFDFFMFAIGYRVGPSFISSMKKF.GAKIVYATLIFLVSAFIVAYACFK-.MFHIGPGIAAGIIAGGLTQSAVIGSSLETISKLPISD.HLKTLYSNQIPIVYTLTYVFGTIGVLIFL.RDIMP
Q89PK9_BRAJA/15-183 FLLLAVAIGTMLGRLKI----..HGFAIGTTACILIVSVLIGQL---------GTFTFPALLRIVLFSLFVFTIGYKSGPEFFASLSVR.TLAQVAMALVLGGTGLVIVLAFAF-.ALKLDPGTASGLAAGALTQSSVIGTASGALAQLGLPK.TVLEQQEANIAAGYAVTYVLGYILTLLYV.PFAAP
Q89PK5_BRAJA/16-184 ALFLVIAAGYWIGSFKI----..GAFSLGPVTGALFAGLVVGDF---------AHVPVSSMTKSFLFLLFLFGVGYSVGPQFVQAMKRD.GLKPVLLAVVVCLTGLAAAIAVGR-.ILGLDPGFAAGLMSGSLSQSAAMGTATDAVNGLAVPE.AQRALYISHIAVADAVCYIFGYAGVIMWC.TVVAP
Q8A9S9_BACTN/15-179 AIFLTLFAGFWLGRFKI----..GKFSLGTVTSVLLVGVLVGQL----------NISVDGPMKAVFFLLFLFAVGYKVGPQFFRGLKKD.GLPQVGFAVLMCIVSLIAPWILAK-.IMGYHVGEAAGLLAGSQTISAVIGVASDTINQLSISD.AQKATFINAIPVAYAVTYIFGTAGSA---.WILAS
Q89PK4_BRAJA/20-187 AIFLSLALGYYFGSFTY----..KGLGLGAVTATLIAAVIIGQI----------GITITGPLKPFFFLMFLFAIGYGVGPQFVRGIAQD.GVPQAIFAAVVCVFCLLAPYVAAK-.IAGYDVGSAAGLYAGSQTISASMGLATDAINRLGLSP.EETKKILDGMPVAYAVTYIFGTVGSAIVL.ALLGP
Q8EF50_SHEON/15-183 AVFLSLAIGYWVGNKTF----..KGFSLGAVTATLLAAVVIGQF----------DITLSSNVKSIFFLMFLFAVGYGIGPQFVQGIAKD.GLPQALFAVVACLFSLLFPILCAK-.IAGYDLGATAGFFAGTQTISASMGLATDAIVHLDLPA.EESKKMFSVIPVAYAVTYIFGTVGSAIVLaQIIPK
YBJL_ECOLI/16-183 LLFVVLALGLCLGKLRL----..GSIQLGNSIGVLVVSLLLGQQ----------HFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRD.GKNYLMLALVMVGSALVIALGLGK-.LFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMES.RQLSLALDNLSLGYALTYLIGLVSLIVGA.RYLPK
Q8RDQ8_FUSNN/294-465 GFSIAVFLGYFLGSIKISMGP.lGTFSLGSIGGAIIVALILGFIGKIGPITFRMDSVVLGKMRTYFLSIFLAGTGLNYGFRVVEAVTGD.GIMIAIVSALVAILSVLFGFLLGHY.VFHINWTLLSGAITGGMTSAPGLGAAIDA-LDCDEPA.-----------VSYGATQPFATLCMVIFS.IIIHK
O52005_HALN1/209-380 GFALVLATGTVLGSIPIPLGP.iGVITLGTTGGVLITALVLGYLGKIGPVTMRMETTILSEIRAFTLAMFLAVVGIDAGSGLVETIAEY.GVEIVVTAGLNSIVAIIGGLVLTRV.IWKMDWIHAAGGITGGHTDTKGLAAAIDA-TGADEVA.-----------AGYGNTYPFALLAMVIYA.KILVA
Q8FS11_COREF/356-528 PFAIGLSLGLLLGAIPVPLPG.dTTMYLGFGGGPIVAGLILGALNRTGPITWQLPFHANRTISTLGLALFLAGVGTSAGAGFRQALTDPqSFVYMGVGFAITVTSALVCAVVGMW.LLKLKWDESMGVAAGATTNPAIISYLNDQ-TGTDLAN.-----------RGYATVYPTAMIGKILAC.QVLFL
Q8FNP2_COREF/367-539 PLVVGLSLGVLVGMMEFPLPG.gSALSLGNAGGPLLIALLLGAMGRTGKVVWQIPYSANLALRQLGITMFLAAIGTTAGAGFRSALSDPaSLLIIGVGALLTLVISVLVLVIGHK.VMRIPFGETAGILAGTQTHPAVLSYISEA-SRNELPA.-----------MGYTSVYPLAMVAKIIAA.QVLLF
Q8A8D8_BACTN/378-551 VIFIGIVLGLALGAIPFSIPGisTPVKLGLAGGPIIVGILLGTFGPRIHMITYTTRSANLMLRALGLSMYLACLGLDAGAHFFDTVFRPeGLLWIALGAGLTIIPTVLVGFVAFK.IMKIDFGSVSGMLCGSMANPMALNYANDT-IPGDNPS.-----------VAYATVYPLCMFLRVIIA.QVLLM
Y035_HAEIN/372-546 PVFIGIGLGVLVGSIPFYIPGfpVALKLGLAGGPLVVALILARIGTIGKLYWFMPPSANLALREIGIVLFLAVVGLKSGGSFFDTLVNGsGLEWMGYGIFITFVPLIIVGTIARL.YGKLNYLTICGLLAGSMTDPPALAFANEIKEDNGAAA.-----------LSYATVYPLVMFLRIMSP.QLLAV
YIDE_SHIFL/373-547 PVFIGIGLGVLLGSIPVFVPGfpAALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFVNTLVNGeGLSWIGYGALITAVPLITVGILARM.LAKMNYLTMCGMLAGSMTDPPALAFANNLHPTSGAAA.-----------LSYATVYPLVMFLRIITP.QLLAV
Q8A5Z4_BACTN/378-551 TIFVGIFLGILLGSLPIAFPGmpTPLKLGLAGGPLVVAILIGRFGHKLHLVTYTTMSANLMLREIGIVLFLASVGIDAGANFVQTVVEGdGLLYVGCGFLITVIPLLIIGAIARL.YYKVNYFTLMGLIAGSNTDPPALAYANQV-TSSDAPA.-----------VGYSTVYPLSMFLRILTG.QMILL
Q8AAG5_BACTN/358-529 PIAMGIVLGVLFGKLNISFSD.tLSFSPGLTGGVLMVALVLSAVGKTGPIIWSMSGPANQLLRQLGLLLFLAEVGTSAGKNLVATFQES.GLLMFGVGAAITVVPMLVAVIVGRL.VFKINILDLLGTITGGMTSTPGLAAADSM-VDSNIPS.-----------VAYATVYPIAMVFLILFI.QVISS
Q8L3K8_TETHA/367-540 WFALGIALSAALGIVGTKVSG..VPIALGGGTASLIVGLVQSIYRDKHAHMDTIPDSLLEFFQSIGLNLFIATVGLSAAKTFISAIQSM.GISVLLIGAVISILPHIITFVICYY.LMKMEPISIIGAQTGADTLSAALNDVSER-VGSDASP.--------FFAAAVAPAYAIGNIFLTLMG.PIFIV
Q89PK9_BRAJA/387-557 FLAAGIAAGLLAGLVSFKVGG..IALTLGGGGGALIAGLLCGWLRSRRPTMGAMPPAAQQTLSDLGLGGFIAAIGLANGHAAWVAIQAH.GLLLVGMGLVVTLVPLVVATLFAYH.VLRMNPVITCGALAGAMTVDAAVTGACEI-AESQTPV.-----------LGVAVPYAVGNVVLTVLG.PIIVA
Q8A9S9_BACTN/392-562 FVGLGILLGGLVGALAIHLGG..IPISLSTSGGALIAGLVFGWLRSKHPTFGGIPEPSLWVLNNVGLNMFIAVVGIAAGPSFVTGFKEV.GFSLFIVGALATAIPLLSGLLMGRY.LFKFHPALTLGCTAGARTTTAALGAIQDA-LGSDTPA.-----------LGYTVTYAVGNTLLIIWG.VAIVL
Q89PK4_BRAJA/394-564 FIGAAIAIGALVGAIVYKIGS..VPLTLSTSGGALISGLFFGWLRSVRPTFGRIPSPTVWFMNSVGLNVFIAIVGISSGPGFVAGLKAL.GFGLFLWGVVATTAPLILAMYVGKY.VFRFHDAIVLGCCSGARTTTASLGMVNDR-AKSQIPG.-----------LGYTVTYAVGNTLLTIWG.MVLVM
Q8EF50_SHEON/389-559 FWAFAIVIGALLGSLVFKIGN..LPLTLSTAGGVLIAGLIFSWVRSFHPTFGWVPEPTVWFMNSVGLNVFIAAIGISAGPNFVAGLKEL.GFSLFLWGVVATTLPLFFAALVGKY.VFKFHPAILLGCCAGARTTTASLGMINEK-AKSNIPS.-----------LGYTITYAVGNTLLTMWG.LVLIL
Y1232_VIBPA/388-558 AFCSFFILGIMFGLVTMTFGQ..VSFSLGNAVGLLLSGITLGFLRANHPTFGYVPQGALNMVKDLGLMFFMVGIGLSAGGKMFEHLTQV.GPQVIGLAFIVSVVPVVIAYLVGAY.ILKMNRALLFGAIIGARTCAPAMDVVNEY-AKSTIPA.-----------LGYAGTYAIANILMTLAG.TILII
YBJL_ECOLI/385-555 AFCAFFVIGLMIGMITFQFST..FSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLMVFMAGVGLSAGSGINNGLGAI.GGQMLIAGLIVSLVPVVICFLFGAY.VLRMNRALLFGAMMGARTCAPAMEIISDT-ARSNIPA.-----------LGYAGTYAIANVLLTLAG.TIIVM