EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF06819 - Arc_PepC)
Archaeal Peptidase A24 C-terminal Domain
(Pfam reference: accession no. PF06819)
(Interpro reference: accession no. IPR009639)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
6 sequences @ 115 aa
(ave. pairwise identity: 0.36)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 4.65)
nucleotides
(available for above)
6 sequences @ 345 bp
(ave. pairwise identity: 0.46)
New Hampshire format
(total tree length: 3.11)
amino acids, restricted set
(corresp. to available nt seqs)
6 sequences @ 115 aa
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 4.65)