EMBL-EBI
>
Goldman Group
PANDIT Home
|
Browse PANDIT
|
Help on PANDIT
|
Release notes
|
Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF06628 - Catalase-rel)
Catalase-related
(
Pfam
reference: accession no.
PF06628
)
(
Interpro
reference: accession no.
IPR010582
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
24 sequences @ 55 aa
(ave. pairwise identity: 0.43)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 9.96)
nucleotides
(available for above)
24 sequences @ 165 bp
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 8.22)
amino acids, restricted set
(corresp. to available nt seqs)
24 sequences @ 55 aa
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 9.96)