EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF06579 - Ly-6_related)
Caenorhabditis elegans ly-6-related protein
(Pfam reference: accession no. PF06579)
(Interpro reference: accession no. IPR010558)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
6 sequences @ 148 aa
(ave. pairwise identity: 0.29)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 5.78)
nucleotides
(available for above)
6 sequences @ 444 bp
(ave. pairwise identity: 0.40)
New Hampshire format
(total tree length: 3.81)
amino acids, restricted set
(corresp. to available nt seqs)
6 sequences @ 148 aa
(ave. pairwise identity: 0.29)
New Hampshire format
(total tree length: 5.78)