PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam
 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF06505 - XylR_N) |
| Activator of aromatic catabolism |
| (Pfam reference: accession no. PF06505) |
| (Interpro reference: accession no. IPR010523) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
16 sequences @ 107 aa (ave. pairwise identity: 0.41) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 8.66) |
| nucleotides (available for above) |
16 sequences @ 321 bp (ave. pairwise identity: 0.52) |
New Hampshire format (total tree length: 6.09) |
|
amino acids, restricted set (corresp. to available nt seqs) |
16 sequences @ 107 aa (ave. pairwise identity: 0.41) |
New Hampshire format (total tree length: 8.66) |